Neratinib_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Neratinib perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Neratinib_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.196666
TMSB10 thymosin beta 10 0.100518
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0900119
COL8A1 collagen, type VIII, alpha 1 0.0805252
B2M beta-2-microglobulin 0.0759643
FBN1 fibrillin 1 0.0678182
FTH1 ferritin, heavy polypeptide 1 0.0654187
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0652319
LDHA lactate dehydrogenase A 0.0572074
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0504397
ZFP36L1 ZFP36 ring finger protein-like 1 0.0487751
BHLHE40 basic helix-loop-helix family, member e40 0.0452021
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0427077
ANXA2 annexin A2 0.0413981
SUCNR1 succinate receptor 1 0.0382903
S100A6 S100 calcium binding protein A6 0.0380052
TAGLN2 transgelin 2 0.03709
HLA-E major histocompatibility complex, class I, E 0.0357714
CANX calnexin 0.0346505
CALR calreticulin 0.0345218
HILPDA hypoxia inducible lipid droplet-associated 0.0327713
IFITM3 interferon induced transmembrane protein 3 0.0320058
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0318327
MSI2 musashi RNA-binding protein 2 0.0315243
IFITM1 interferon induced transmembrane protein 1 0.0309864
MEIS2 Meis homeobox 2 0.0308284
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0306845
GOLGA2 golgin A2 0.0304924
NAP1L1 nucleosome assembly protein 1-like 1 0.0293791
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0292698
PTMA prothymosin, alpha 0.0287775
COL1A2 collagen, type I, alpha 2 0.0275195
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0272492
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0271056
MYADM myeloid-associated differentiation marker 0.0270398
FTL ferritin, light polypeptide 0.0268866
LOX lysyl oxidase 0.0261009
UBC ubiquitin C 0.0257175
FNBP4 formin binding protein 4 0.0252708
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0250098
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0247526
COPA coatomer protein complex, subunit alpha 0.0244423
GARS1 glycyl-tRNA synthetase 1 0.0240822
GOLGA4 golgin A4 0.0230556
ADM adrenomedullin 0.0224404
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0217958
RAB1A RAB1A, member RAS oncogene family 0.0217096
PCBP2 poly(rC) binding protein 2 0.0214019
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0213906
SOX9 SRY (sex determining region Y)-box 9 0.0213352
PDIA6 protein disulfide isomerase family A, member 6 0.0211463
LOC112694756 uncharaterized LOC112694756 0.0209668
TPM4 tropomyosin 4 0.0208672
SOD2 superoxide dismutase 2, mitochondrial 0.0205745
EIF1 eukaryotic translation initiation factor 1 0.0205451
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.020233
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0194726
ENO1 enolase 1, (alpha) 0.019367
MBNL2 muscleblind-like splicing regulator 2 0.0192575
HDLBP high density lipoprotein binding protein 0.0191107
SAMD9 sterile alpha motif domain containing 9 0.0190008
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0189722
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0187093
AXL AXL receptor tyrosine kinase 0.0186376
JUN jun proto-oncogene 0.0186366
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.0186051
RAB14 RAB14, member RAS oncogene family 0.0186037
TTC3 tetratricopeptide repeat domain 3 0.0184187
VMP1 vacuole membrane protein 1 0.0183188
RAB18 RAB18, member RAS oncogene family 0.0180969
CBX3 chromobox homolog 3 0.0177851
MT2A metallothionein 2A 0.0176055
COL5A2 collagen, type V, alpha 2 0.0175975
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0174639
TPI1 triosephosphate isomerase 1 0.0174482
SMIM44 small integral membrane protein 44 0.0174467
HSPB1 heat shock 27kDa protein 1 0.0171733
WAC WW domain containing adaptor with coiled-coil 0.0170758
ARF4 ADP-ribosylation factor 4 0.016974
CALU calumenin 0.0169168
MXI1 MAX interactor 1, dimerization protein 0.0169055
UBE2R2 ubiquitin-conjugating enzyme E2R 2 0.0168304
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0163253
RNMT RNA (guanine-7-) methyltransferase 0.0162958
RSAD2 radical S-adenosyl methionine domain containing 2 0.0162183
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0162121
SRRM2 serine/arginine repetitive matrix 2 0.0161482
MRPS6 mitochondrial ribosomal protein S6 0.0159005
FNDC3A fibronectin type III domain containing 3A 0.0158956
MBNL1 muscleblind-like splicing regulator 1 0.0158893
CXXC5 CXXC finger protein 5 0.0158747
MORF4L2 mortality factor 4 like 2 0.015863
IGFBP6 insulin-like growth factor binding protein 6 0.0158554
MATR3 matrin 3 0.0158357
PGK1 phosphoglycerate kinase 1 0.0156624
PRRC1 proline-rich coiled-coil 1 0.0155375
ITM2B integral membrane protein 2B 0.0154916
DDIT4 DNA-damage-inducible transcript 4 0.0153995
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.0152713
RAB2A RAB2A, member RAS oncogene family 0.0152578

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.179704
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.131635
AKAP12 A kinase (PRKA) anchor protein 12 -0.114135
PLAT plasminogen activator, tissue -0.112822
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.111683
PODXL podocalyxin-like -0.0962144
NDRG1 N-myc downstream regulated 1 -0.0896774
TRIO trio Rho guanine nucleotide exchange factor -0.0858341
NAV1 neuron navigator 1 -0.0856192
CD44 CD44 molecule (Indian blood group) -0.0830342
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0754336
SLC39A11 solute carrier family 39, member 11 -0.0724604
NAV2 neuron navigator 2 -0.0654086
CDH13 cadherin 13 -0.0646603
FLNB filamin B, beta -0.0645444
PRELID2 PRELI domain containing 2 -0.0638876
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0608417
FNDC3B fibronectin type III domain containing 3B -0.0565839
RUNX1 runt-related transcription factor 1 -0.056151
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0533433
SEPTIN9 septin 9 -0.0495793
PBX3 pre-B-cell leukemia homeobox 3 -0.049101
RHOBTB3 Rho-related BTB domain containing 3 -0.0467212
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0447401
COL5A1 collagen, type V, alpha 1 -0.0430855
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0425197
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0406095
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0404482
ASPH aspartate beta-hydroxylase -0.0403639
SMYD3 SET and MYND domain containing 3 -0.0403421
EGFR epidermal growth factor receptor -0.0397306
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0396176
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0395348
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0385827
FSTL1 follistatin-like 1 -0.0363075
EFNA5 ephrin-A5 -0.0350257
AHNAK2 AHNAK nucleoprotein 2 -0.034725
AUTS2 autism susceptibility candidate 2 -0.034715
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0346683
MYOF myoferlin -0.0339161
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0337257
HDAC9 histone deacetylase 9 -0.0332257
ANKRD36 ankyrin repeat domain 36 -0.0329266
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0324556
STC1 stanniocalcin 1 -0.032122
PSD3 pleckstrin and Sec7 domain containing 3 -0.0319289
DPYSL2 dihydropyrimidinase-like 2 -0.0314548
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0314219
CLTC clathrin, heavy chain (Hc) -0.0310982
SVIL supervillin -0.030769
BACE2 beta-site APP-cleaving enzyme 2 -0.0303182
SBF2 SET binding factor 2 -0.0297928
DST dystonin -0.0293903
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0291893
WWTR1 WW domain containing transcription regulator 1 -0.0283088
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.028068
FBXL7 F-box and leucine-rich repeat protein 7 -0.0279727
AFF3 AF4/FMR2 family, member 3 -0.0278475
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0277777
CD99 CD99 molecule -0.0277352
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 -0.0275086
MTSS1 metastasis suppressor 1 -0.0271942
FER fer (fps/fes related) tyrosine kinase -0.0270482
ESYT2 extended synaptotagmin-like protein 2 -0.0269509
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0268633
ANKRD11 ankyrin repeat domain 11 -0.026525
DLG1 discs, large homolog 1 (Drosophila) -0.0263606
SLC22A23 solute carrier family 22, member 23 -0.026298
ADAR adenosine deaminase, RNA-specific -0.0261179
ZMYND8 zinc finger, MYND-type containing 8 -0.0260969
MPRIP myosin phosphatase Rho interacting protein -0.0260705
ANKRD12 ankyrin repeat domain 12 -0.0260189
PRKCE protein kinase C, epsilon -0.0256894
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0254897
CRYBG3 beta-gamma crystallin domain containing 3 -0.0252866
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0249915
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0249329
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.0247307
MACF1 microtubule-actin crosslinking factor 1 -0.0244287
STK10 serine/threonine kinase 10 -0.0243401
MYO9B myosin IXB -0.024141
MYH9 myosin, heavy chain 9, non-muscle -0.0239589
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0238874
RPL37A ribosomal protein L37a -0.0237756
TDRD7 tudor domain containing 7 -0.0234875
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0234836
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0233987
OSMR oncostatin M receptor -0.0233764
S100A10 S100 calcium binding protein A10 -0.0230875
ARFGEF3 ARFGEF family member 3 -0.0230493
AVL9 AVL9 homolog (S. cerevisiase) -0.0229458
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0228161
NPC1 Niemann-Pick disease, type C1 -0.0228025
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0227248
ATP13A3 ATPase type 13A3 -0.0226558
FAM219A family with sequence similarity 219, member A -0.0224488
MSN moesin -0.0223791
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0223286
CAPN2 calpain 2, (m/II) large subunit -0.0223117
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0221399