Neratinib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Neratinib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Neratinib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.0930723
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0872041
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0637273
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0626228
POTEF POTE ankyrin domain family, member F 0.0541265
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0516939
PCBP2 poly(rC) binding protein 2 0.0512444
CANX calnexin 0.046117
TSC22D2 TSC22 domain family, member 2 0.0460125
B2M beta-2-microglobulin 0.0444379
PDIA6 protein disulfide isomerase family A, member 6 0.0425103
TPM3 tropomyosin 3 0.0371709
KMT2E lysine (K)-specific methyltransferase 2E 0.0349081
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0319301
CBX3 chromobox homolog 3 0.031095
SFRP4 secreted frizzled-related protein 4 0.0308098
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0306512
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0305609
KTN1 kinectin 1 (kinesin receptor) 0.030428
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0290091
ISG15 ISG15 ubiquitin-like modifier 0.0274728
NTM neurotrimin 0.0263219
SET SET nuclear proto-oncogene 0.0262174
ZFP36L1 ZFP36 ring finger protein-like 1 0.0260463
PFN1 profilin 1 0.0257782
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 0.0256342
RPS12 ribosomal protein S12 0.0255478
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0255421
FBL fibrillarin 0.0248851
APLP2 amyloid beta (A4) precursor-like protein 2 0.0245859
TMEM87A transmembrane protein 87A 0.0233851
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0230464
EZR ezrin 0.0229136
PDIA3 protein disulfide isomerase family A, member 3 0.0227384
EEF2 eukaryotic translation elongation factor 2 0.0226275
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0222127
KDM6A lysine (K)-specific demethylase 6A 0.0221344
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0215937
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0215393
SERBP1 SERPINE1 mRNA binding protein 1 0.0209094
CNRIP1 cannabinoid receptor interacting protein 1 0.0207379
MLEC malectin 0.0205414
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 0.0203637
PRKCI protein kinase C, iota 0.0202899
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial 0.0202845
JUN jun proto-oncogene 0.0197324
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0191681
UBXN4 UBX domain protein 4 0.0191468
UBE2K ubiquitin-conjugating enzyme E2K 0.0190011
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0188748
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.0187886
GPBP1 GC-rich promoter binding protein 1 0.0186929
NARS1 asparaginyl-tRNA synthetase 1 0.0185045
DDIT4 DNA-damage-inducible transcript 4 0.0183404
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0181576
NOP58 NOP58 ribonucleoprotein 0.0181483
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.0180482
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0177896
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.0177774
ZFP36 ZFP36 ring finger protein 0.0176831
GSPT1 G1 to S phase transition 1 0.017682
DICER1 dicer 1, ribonuclease type III 0.0176711
SFTPA2 surfactant protein A2 0.0175979
RAB6A RAB6A, member RAS oncogene family 0.0173588
RPL37A ribosomal protein L37a 0.0173292
RPN2 ribophorin II 0.017145
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) 0.0171191
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 0.0171164
UBE2B ubiquitin-conjugating enzyme E2B 0.0171028
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0170351
ANKRD11 ankyrin repeat domain 11 0.0169986
ACSL3 acyl-CoA synthetase long-chain family member 3 0.016896
SNX3 sorting nexin 3 0.0168358
GAP43 growth associated protein 43 0.016756
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0167383
EIF5B eukaryotic translation initiation factor 5B 0.0167253
RPS6 ribosomal protein S6 0.0167091
FNDC3B fibronectin type III domain containing 3B 0.0165087
PPP4R1 protein phosphatase 4, regulatory subunit 1 0.0164549
SOS2 son of sevenless homolog 2 (Drosophila) 0.0164381
RPL21 ribosomal protein L21 0.016433
RPL11 ribosomal protein L11 0.01643
NFE2L1 nuclear factor, erythroid 2-like 1 0.0163505
RPS27 ribosomal protein S27 0.0162816
TRIM37 tripartite motif containing 37 0.0160956
SCAF4 SR-related CTD-associated factor 4 0.0160482
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0159628
ADGRL1 adhesion G protein-coupled receptor L1 0.0158403
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0156412
MBNL2 muscleblind-like splicing regulator 2 0.0155767
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0155413
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0155374
UBP1 upstream binding protein 1 (LBP-1a) 0.0153929
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0152922
CCDC88A coiled-coil domain containing 88A 0.0151737
RPL3 ribosomal protein L3 0.0151578
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0150867
CD46 CD46 molecule, complement regulatory protein 0.0150352
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0149827
MSI2 musashi RNA-binding protein 2 0.0149795

decreased expression

Symbol Name Standardized Value
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.201405
CDH10 cadherin 10, type 2 (T2-cadherin) -0.163083
ADGRL2 adhesion G protein-coupled receptor L2 -0.136713
COL5A2 collagen, type V, alpha 2 -0.134386
TENM3 teneurin transmembrane protein 3 -0.121334
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.117607
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.114401
FOXP2 forkhead box P2 -0.111313
CADM2 cell adhesion molecule 2 -0.10124
VIM vimentin -0.0904937
DST dystonin -0.0872558
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0834765
COL11A1 collagen, type XI, alpha 1 -0.0752201
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0738671
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.072653
ADGRV1 adhesion G protein-coupled receptor V1 -0.0674525
MEIS2 Meis homeobox 2 -0.0668891
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.064007
COL3A1 collagen, type III, alpha 1 -0.06246
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0555462
PCLO piccolo presynaptic cytomatrix protein -0.0551112
PARD3B par-3 family cell polarity regulator beta -0.0536577
PDGFC platelet derived growth factor C -0.0518277
PBX3 pre-B-cell leukemia homeobox 3 -0.0513494
TAS2R14 taste receptor, type 2, member 14 -0.0492265
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0467449
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0462126
NFIA nuclear factor I/A -0.045115
TRPS1 trichorhinophalangeal syndrome I -0.0437993
PRKD1 protein kinase D1 -0.0433131
ZFAND3 zinc finger, AN1-type domain 3 -0.0429719
GPC3 glypican 3 -0.0425009
ACTG1 actin gamma 1 -0.0420901
ZNF608 zinc finger protein 608 -0.0420221
H1-0 H1.0 linker histone -0.0418521
HMGA2 high mobility group AT-hook 2 -0.0400471
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0397949
NCAM2 neural cell adhesion molecule 2 -0.0393572
AHNAK AHNAK nucleoprotein -0.0389831
SMYD3 SET and MYND domain containing 3 -0.0389124
LIN28B lin-28 homolog B (C. elegans) -0.0381572
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0380913
RERE arginine-glutamic acid dipeptide (RE) repeats -0.037974
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0373235
SHROOM3 shroom family member 3 -0.0359553
ANK2 ankyrin 2, neuronal -0.0356429
DMD dystrophin -0.0351902
TNRC6B trinucleotide repeat containing 6B -0.0349403
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0337659
CENPE centromere protein E, 312kDa -0.0336274
ZFPM2 zinc finger protein, FOG family member 2 -0.0335606
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.033365
VCL vinculin -0.0333086
EMP1 epithelial membrane protein 1 -0.0329598
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 -0.0329112
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0314478
MKI67 marker of proliferation Ki-67 -0.0313912
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.03113
CAMKMT calmodulin-lysine N-methyltransferase -0.0310985
PCDH9 protocadherin 9 -0.030871
FIGN fidgetin -0.0307129
ZNF385D zinc finger protein 385D -0.0305112
METAP2 methionyl aminopeptidase 2 -0.030441
JMJD1C jumonji domain containing 1C -0.0304344
WSB1 WD repeat and SOCS box containing 1 -0.0304075
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0304019
DPYD dihydropyrimidine dehydrogenase -0.0302423
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0300941
RAD21 RAD21 homolog (S. pombe) -0.0300869
AGTPBP1 ATP/GTP binding protein 1 -0.0295601
NIPBL Nipped-B homolog (Drosophila) -0.0294795
MEF2C myocyte enhancer factor 2C -0.0293801
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -0.0293426
BPTF bromodomain PHD finger transcription factor -0.0292859
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0283604
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0280383
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0273486
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0269557
SYT1 synaptotagmin I -0.0269159
ANKRD33B ankyrin repeat domain 33B -0.0269053
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -0.026855
HMGB2 high mobility group box 2 -0.0265841
GREB1L growth regulation by estrogen in breast cancer-like -0.0265406
RBM20 RNA binding motif protein 20 -0.0264681
SIK2 salt-inducible kinase 2 -0.0264294
PALM2AKAP2 PALM2 and AKAP2 fusion -0.026138
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0260182
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E -0.0258134
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0257086
COL1A2 collagen, type I, alpha 2 -0.0255348
RAB31 RAB31, member RAS oncogene family -0.0255106
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0254484
LRRC4C leucine rich repeat containing 4C -0.0252485
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0252042
WDR70 WD repeat domain 70 -0.0251849
HP1BP3 heterochromatin protein 1, binding protein 3 -0.025182
OSBPL10 oxysterol binding protein-like 10 -0.0251306
PDE4D phosphodiesterase 4D, cAMP-specific -0.0251267
ECT2 epithelial cell transforming 2 -0.0249148
AK1 adenylate kinase 1 -0.024867