Neratinib_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Neratinib perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Neratinib_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.11541
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0991119
VMP1 vacuole membrane protein 1 0.060158
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0576664
TTC3 tetratricopeptide repeat domain 3 0.0535415
PCBP2 poly(rC) binding protein 2 0.0528836
TXNIP thioredoxin interacting protein 0.0502301
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0498452
LOXL3 lysyl oxidase-like 3 0.0495242
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0477437
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0470901
S100A6 S100 calcium binding protein A6 0.0465369
PKM pyruvate kinase, muscle 0.0460395
PRDX2 peroxiredoxin 2 0.0457824
LDHA lactate dehydrogenase A 0.0449283
WDR43 WD repeat domain 43 0.0441037
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0436449
CPED1 cadherin-like and PC-esterase domain containing 1 0.0427826
CD47 CD47 molecule 0.0417525
TJP1 tight junction protein 1 0.0382904
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0380875
RHOA ras homolog family member A 0.0367064
SRRM2 serine/arginine repetitive matrix 2 0.0366844
CSF1 colony stimulating factor 1 (macrophage) 0.0360551
CALR calreticulin 0.034987
EGFR epidermal growth factor receptor 0.0341438
SSR1 signal sequence receptor, alpha 0.0336782
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.033021
DSTN destrin (actin depolymerizing factor) 0.0324348
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0308776
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0308484
MT2A metallothionein 2A 0.030501
DUSP4 dual specificity phosphatase 4 0.0300423
ARF4 ADP-ribosylation factor 4 0.0299483
RBM25 RNA binding motif protein 25 0.0295439
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0294873
POTEF POTE ankyrin domain family, member F 0.029001
CAVIN2 caveolae associated protein 2 0.0285163
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0284426
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.027416
PDE7B phosphodiesterase 7B 0.0273854
PICALM phosphatidylinositol binding clathrin assembly protein 0.0273343
MLEC malectin 0.0268003
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 0.026632
APLP2 amyloid beta (A4) precursor-like protein 2 0.0258532
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.0258121
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0257487
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0251631
B2M beta-2-microglobulin 0.0250601
ACACA acetyl-CoA carboxylase alpha 0.0249145
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0248318
ATP5F1A ATP synthase F1 subunit alpha 0.0243695
ELOVL5 ELOVL fatty acid elongase 5 0.0241508
CCNL1 cyclin L1 0.0241303
STAU2 staufen double-stranded RNA binding protein 2 0.0239128
GLI3 GLI family zinc finger 3 0.023591
PPP1R9A protein phosphatase 1, regulatory subunit 9A 0.023359
PLXNA2 plexin A2 0.0231548
RNF145 ring finger protein 145 0.0231045
TSC22D1 TSC22 domain family, member 1 0.0229472
FXR1 fragile X mental retardation, autosomal homolog 1 0.0228243
NPAS2 neuronal PAS domain protein 2 0.0228024
PIBF1 progesterone immunomodulatory binding factor 1 0.022338
PFN1 profilin 1 0.0222984
MBNL1 muscleblind-like splicing regulator 1 0.0218497
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0218013
CD46 CD46 molecule, complement regulatory protein 0.0216113
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0214196
IFITM1 interferon induced transmembrane protein 1 0.0212115
WDFY3 WD repeat and FYVE domain containing 3 0.0211742
BICD1 bicaudal D homolog 1 (Drosophila) 0.0208825
HDLBP high density lipoprotein binding protein 0.020754
ZRANB2 zinc finger, RAN-binding domain containing 2 0.0206843
WASF2 WAS protein family, member 2 0.0206503
EIF4B eukaryotic translation initiation factor 4B 0.020551
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0203694
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa 0.0200148
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 0.0197153
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0196265
EIF4A2 eukaryotic translation initiation factor 4A2 0.0193947
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0193624
RUSC2 RUN and SH3 domain containing 2 0.0193254
EEF1G eukaryotic translation elongation factor 1 gamma 0.0192395
MED13 mediator complex subunit 13 0.0190931
ALKBH5 AlkB family member 5, RNA demethylase 0.0190388
ATP7B ATPase, Cu++ transporting, beta polypeptide 0.018881
PCBP1 poly(rC) binding protein 1 0.018842
ATXN2 ataxin 2 0.0188061
SRRM1 serine/arginine repetitive matrix 1 0.018775
NEBL nebulette 0.0185644
HDGF hepatoma-derived growth factor 0.0185192
LAMTOR5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 0.0184373
ARF1 ADP-ribosylation factor 1 0.0183506
NUP58 nucleoporin 58 0.0181925
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0181857
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0181405
RBMS2 RNA binding motif, single stranded interacting protein 2 0.0181337
VIRMA vir like m6A methyltransferase associated 0.0178857
CHD9 chromodomain helicase DNA binding protein 9 0.0178685
TPK1 thiamin pyrophosphokinase 1 0.0178448

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.231888
TPT1 tumor protein, translationally-controlled 1 -0.147565
PDE4D phosphodiesterase 4D, cAMP-specific -0.116841
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.096463
AHNAK AHNAK nucleoprotein -0.0935425
BMP10 bone morphogenetic protein 10 -0.0912098
RPS6 ribosomal protein S6 -0.0842405
TXNRD1 thioredoxin reductase 1 -0.0828209
RPS8 ribosomal protein S8 -0.0747578
CAMTA1 calmodulin binding transcription activator 1 -0.0722792
MKI67 marker of proliferation Ki-67 -0.0718922
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.070671
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0645232
ACTG1 actin gamma 1 -0.0638206
RPLP1 ribosomal protein, large, P1 -0.0613335
RPL26 ribosomal protein L26 -0.0611891
GLI2 GLI family zinc finger 2 -0.0597754
SOX6 SRY (sex determining region Y)-box 6 -0.0588645
RPL9 ribosomal protein L9 -0.0585692
CCND1 cyclin D1 -0.0565349
TM4SF1 transmembrane 4 L six family member 1 -0.0565238
DLG1 discs, large homolog 1 (Drosophila) -0.0543191
RPL34 ribosomal protein L34 -0.0538872
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0512119
FUS FUS RNA binding protein -0.0507011
VCL vinculin -0.0503199
DIAPH3 diaphanous-related formin 3 -0.04807
TBC1D22A TBC1 domain family, member 22A -0.0476754
PRELID2 PRELI domain containing 2 -0.0457705
RPL35A ribosomal protein L35a -0.045396
ANXA1 annexin A1 -0.0448315
PDGFC platelet derived growth factor C -0.0439459
S100A10 S100 calcium binding protein A10 -0.0406267
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.040297
RPS24 ribosomal protein S24 -0.0399603
H1-4 H1.4 linker histone, cluster member -0.0394552
S100A4 S100 calcium binding protein A4 -0.0394286
RPL38 ribosomal protein L38 -0.0389988
PTMA prothymosin, alpha -0.0389647
RPS2 ribosomal protein S2 -0.037874
SPATS2L spermatogenesis associated, serine-rich 2-like -0.036977
ANKRD12 ankyrin repeat domain 12 -0.0366719
RPS21 ribosomal protein S21 -0.0361027
FNIP1 folliculin interacting protein 1 -0.0353556
APP amyloid beta (A4) precursor protein -0.035153
CAMKMT calmodulin-lysine N-methyltransferase -0.0350582
RPL12 ribosomal protein L12 -0.0344799
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0341287
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) -0.033896
RPS23 ribosomal protein S23 -0.033816
SLC38A2 solute carrier family 38, member 2 -0.0335416
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0335175
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0334358
ANLN anillin, actin binding protein -0.0329101
RPS17 ribosomal protein S17 -0.0325818
USP34 ubiquitin specific peptidase 34 -0.0325412
ZEB1 zinc finger E-box binding homeobox 1 -0.0322211
ANKRD11 ankyrin repeat domain 11 -0.0318372
TASOR2 transcription activation suppressor family member 2 -0.0314052
NAP1L1 nucleosome assembly protein 1-like 1 -0.0309514
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0304983
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0304836
WSB1 WD repeat and SOCS box containing 1 -0.0303396
XPO1 exportin 1 -0.030175
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0301383
MAPK8 mitogen-activated protein kinase 8 -0.0300134
RPL4 ribosomal protein L4 -0.0297773
ATP9B ATPase, class II, type 9B -0.0297203
MACROD2 MACRO domain containing 2 -0.029605
MAP4 microtubule-associated protein 4 -0.029517
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0294117
MEF2A myocyte enhancer factor 2A -0.0293772
RPL7A ribosomal protein L7a -0.0293222
PHF3 PHD finger protein 3 -0.0290726
RPL30 ribosomal protein L30 -0.0290153
KPNB1 karyopherin (importin) beta 1 -0.0287674
HJURP Holliday junction recognition protein -0.0287061
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0285606
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0283028
SMC4 structural maintenance of chromosomes 4 -0.0281962
TUBB4B tubulin, beta 4B class IVb -0.0280346
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0277867
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0276475
FAM162A family with sequence similarity 162, member A -0.0269719
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0269376
RPS12 ribosomal protein S12 -0.0268374
RPL32 ribosomal protein L32 -0.0267862
PDE8A phosphodiesterase 8A -0.0267266
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.026466
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0264471
JMJD1C jumonji domain containing 1C -0.0264148
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0263204
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0262384
UBC ubiquitin C -0.0261907
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0258485
SDK1 sidekick cell adhesion molecule 1 -0.0258133
RPL36 ribosomal protein L36 -0.0257937
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0255716
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0252616
GLS2 glutaminase 2 (liver, mitochondrial) -0.0248899