Nevirapine_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Nevirapine perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Nevirapine_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.157007
EFNA5 ephrin-A5 0.13899
KANSL1 KAT8 regulatory NSL complex subunit 1 0.111505
FN1 fibronectin 1 0.104729
GPC6 glypican 6 0.101514
VGF VGF nerve growth factor inducible 0.0908582
IGFBP3 insulin-like growth factor binding protein 3 0.0897896
JMJD1C jumonji domain containing 1C 0.0888925
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.085738
GRB10 growth factor receptor-bound protein 10 0.0851241
NDRG1 N-myc downstream regulated 1 0.083664
DST dystonin 0.0823626
PDE10A phosphodiesterase 10A 0.0781625
KMT2C lysine (K)-specific methyltransferase 2C 0.0781469
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0777825
COL6A3 collagen, type VI, alpha 3 0.0777202
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0668544
SPAG9 sperm associated antigen 9 0.065233
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.064275
FNDC3B fibronectin type III domain containing 3B 0.0634929
ASPH aspartate beta-hydroxylase 0.063215
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0627241
ESYT2 extended synaptotagmin-like protein 2 0.0604213
STC1 stanniocalcin 1 0.0596774
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0596059
CEMIP cell migration inducing protein, hyaluronan binding 0.0595311
DLG1 discs, large homolog 1 (Drosophila) 0.0583105
USP34 ubiquitin specific peptidase 34 0.0582048
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0555005
APP amyloid beta (A4) precursor protein 0.0549954
HELZ helicase with zinc finger 0.0548404
CALU calumenin 0.0523338
RORA RAR-related orphan receptor A 0.0518263
RAB7A RAB7A, member RAS oncogene family 0.0517589
MACF1 microtubule-actin crosslinking factor 1 0.0513178
CANX calnexin 0.0512967
MARCHF6 membrane associated ring-CH-type finger 6 0.0507379
SMYD3 SET and MYND domain containing 3 0.0505989
FLNB filamin B, beta 0.0492466
TRIO trio Rho guanine nucleotide exchange factor 0.0489401
RTN4 reticulon 4 0.0487066
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0486355
ERRFI1 ERBB receptor feedback inhibitor 1 0.0480913
TMEM165 transmembrane protein 165 0.0478032
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0470421
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0459053
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0447715
NPEPPS aminopeptidase puromycin sensitive 0.0446122
CD44 CD44 molecule (Indian blood group) 0.0442632
NAMPT nicotinamide phosphoribosyltransferase 0.0442591
NAP1L1 nucleosome assembly protein 1-like 1 0.0438447
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0418378
MBNL2 muscleblind-like splicing regulator 2 0.0400818
AKAP13 A kinase (PRKA) anchor protein 13 0.0382644
LOC112694756 uncharaterized LOC112694756 0.0378873
NALF1 NALCN channel auxiliary factor 1 0.0377418
GLS2 glutaminase 2 (liver, mitochondrial) 0.0355287
SEC31A SEC31 homolog A (S. cerevisiae) 0.0354487
BACE2 beta-site APP-cleaving enzyme 2 0.0350192
SCFD1 sec1 family domain containing 1 0.0344534
ELL2 elongation factor, RNA polymerase II, 2 0.0337089
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0336488
UBE2H ubiquitin-conjugating enzyme E2H 0.0334784
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0328704
BRWD1 bromodomain and WD repeat domain containing 1 0.0327126
LAMB3 laminin, beta 3 0.0320993
PRKCA protein kinase C, alpha 0.0320255
ARHGAP12 Rho GTPase activating protein 12 0.0317167
RB1CC1 RB1-inducible coiled-coil 1 0.0314578
ZCCHC7 zinc finger, CCHC domain containing 7 0.0314289
CARD16 caspase recruitment domain family, member 16 0.0299775
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0299588
MAP4 microtubule-associated protein 4 0.0281442
CHD1 chromodomain helicase DNA binding protein 1 0.0278916
MBNL1 muscleblind-like splicing regulator 1 0.0269329
METTL15 methyltransferase like 15 0.0266948
MYO1E myosin IE 0.02549
TXNRD1 thioredoxin reductase 1 0.0248066
RUNX1 runt-related transcription factor 1 0.0248022
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0234074
OGA O-GlcNAcase 0.0226125
RBM39 RNA binding motif protein 39 0.0225315
EPS8 epidermal growth factor receptor pathway substrate 8 0.0218554
RNF145 ring finger protein 145 0.0208289
PSD3 pleckstrin and Sec7 domain containing 3 0.0204659
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0201946
EEF2 eukaryotic translation elongation factor 2 0.020194
BIRC6 baculoviral IAP repeat containing 6 0.0197615
MATR3 matrin 3 0.0193477
ANKRD11 ankyrin repeat domain 11 0.0191417
PICALM phosphatidylinositol binding clathrin assembly protein 0.018716
AKAP12 A kinase (PRKA) anchor protein 12 0.0168973
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0165084
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0147218
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0134577
PEAK1 pseudopodium-enriched atypical kinase 1 0.0128753
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0112885
AGO3 argonaute RISC catalytic component 3 0.0108908
GNAS GNAS complex locus 0.0106338
NIPBL Nipped-B homolog (Drosophila) 0.0100676

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.145741
LMO7 LIM domain 7 -0.133173
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.109329
TPT1 tumor protein, translationally-controlled 1 -0.106659
NKD1 naked cuticle homolog 1 (Drosophila) -0.0995601
VIM vimentin -0.0979103
RPS6 ribosomal protein S6 -0.097359
PGK1 phosphoglycerate kinase 1 -0.0800702
B2M beta-2-microglobulin -0.079779
LDHA lactate dehydrogenase A -0.0790675
NAV2 neuron navigator 2 -0.0785251
SLC38A1 solute carrier family 38, member 1 -0.0773909
DSCAM Down syndrome cell adhesion molecule -0.0757703
RPL35A ribosomal protein L35a -0.0746036
RPS12 ribosomal protein S12 -0.0704487
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0696539
ZBTB20 zinc finger and BTB domain containing 20 -0.0689659
IGF2 insulin-like growth factor 2 -0.0632889
EGFR epidermal growth factor receptor -0.0629845
HLA-B major histocompatibility complex, class I, B -0.0627533
KTN1 kinectin 1 (kinesin receptor) -0.0626824
RPL37A ribosomal protein L37a -0.0613907
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0571054
FTL ferritin, light polypeptide -0.0564219
RPL7A ribosomal protein L7a -0.0556103
EIF1 eukaryotic translation initiation factor 1 -0.0550007
RPS8 ribosomal protein S8 -0.0547945
MT2A metallothionein 2A -0.0545346
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0538822
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.05364
SLC38A2 solute carrier family 38, member 2 -0.0536285
RPL19 ribosomal protein L19 -0.0515817
RPS13 ribosomal protein S13 -0.0505399
MSI2 musashi RNA-binding protein 2 -0.0493366
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0489478
ACTG1 actin gamma 1 -0.0489319
RPLP1 ribosomal protein, large, P1 -0.048567
ZNF292 zinc finger protein 292 -0.0480794
BPTF bromodomain PHD finger transcription factor -0.0476562
LMAN1 lectin, mannose-binding, 1 -0.0475773
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0474339
RPL26 ribosomal protein L26 -0.0472795
WSB1 WD repeat and SOCS box containing 1 -0.0471922
PDE8A phosphodiesterase 8A -0.0456059
WASF2 WAS protein family, member 2 -0.044925
AK1 adenylate kinase 1 -0.0447671
DSPP dentin sialophosphoprotein -0.0430784
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0427948
RPL11 ribosomal protein L11 -0.0416928
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0406641
CALR calreticulin -0.0402167
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0394959
PDIA4 protein disulfide isomerase family A, member 4 -0.0391526
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0389022
COPB1 coatomer protein complex, subunit beta 1 -0.0370547
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0366618
CDK6 cyclin-dependent kinase 6 -0.0364408
HM13 histocompatibility (minor) 13 -0.0353071
RPL23 ribosomal protein L23 -0.0349931
MED13L mediator complex subunit 13-like -0.034977
CD2AP CD2-associated protein -0.0344574
GOLGB1 golgin B1 -0.0343322
EXT1 exostosin glycosyltransferase 1 -0.0336415
MCTP1 multiple C2 domains, transmembrane 1 -0.0329414
RPL8 ribosomal protein L8 -0.0313956
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0310021
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0304271
OSBPL8 oxysterol binding protein-like 8 -0.0303118
ANXA2 annexin A2 -0.0302787
PDLIM5 PDZ and LIM domain 5 -0.0301584
INSIG1 insulin induced gene 1 -0.0297888
FAT1 FAT atypical cadherin 1 -0.0292931
PDE4D phosphodiesterase 4D, cAMP-specific -0.029269
USP33 ubiquitin specific peptidase 33 -0.0289375
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0288613
RND3 Rho family GTPase 3 -0.0286752
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0286727
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0265753
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0259771
ATOSA atos homolog A -0.0256347
RPS21 ribosomal protein S21 -0.0245277
MMP1 matrix metallopeptidase 1 -0.0242624
WAPL WAPL cohesin release factor -0.0226334
RPS3 ribosomal protein S3 -0.0218384
TMSB10 thymosin beta 10 -0.0214036
SRRM2 serine/arginine repetitive matrix 2 -0.0213353
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0199662
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0190532
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0188032
RPS19 ribosomal protein S19 -0.0188022
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0186024
STAU1 staufen double-stranded RNA binding protein 1 -0.0179628
ZFAND3 zinc finger, AN1-type domain 3 -0.0176671
RBM25 RNA binding motif protein 25 -0.017075
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0158261
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0150848
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0148641
PTK2 protein tyrosine kinase 2 -0.0140971
EPN2 epsin 2 -0.0135005
ZEB1 zinc finger E-box binding homeobox 1 -0.0134571