Niclosamide (olamine)_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Niclosamide (olamine) perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Niclosamide (olamine)_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.180024
FAM13A family with sequence similarity 13, member A 0.10725
HELZ helicase with zinc finger 0.106575
MEF2A myocyte enhancer factor 2A 0.0918767
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0827436
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0799623
AKAP12 A kinase (PRKA) anchor protein 12 0.0655712
FNDC3B fibronectin type III domain containing 3B 0.0608601
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0588243
NDRG1 N-myc downstream regulated 1 0.0556641
SEPTIN9 septin 9 0.0556513
LPIN1 lipin 1 0.0519007
HILPDA hypoxia inducible lipid droplet-associated 0.050557
DTNA dystrobrevin, alpha 0.0497853
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0482315
WDR45B WD repeat domain 45B 0.0439781
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0427673
FNBP1 formin binding protein 1 0.0404108
ZMIZ1 zinc finger, MIZ-type containing 1 0.0391706
SMAD3 SMAD family member 3 0.0390423
KDM3A lysine (K)-specific demethylase 3A 0.038958
EEF2 eukaryotic translation elongation factor 2 0.0357734
OGA O-GlcNAcase 0.0344099
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0340407
DDIT4 DNA-damage-inducible transcript 4 0.0334863
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0328322
COPA coatomer protein complex, subunit alpha 0.0320666
TRIO trio Rho guanine nucleotide exchange factor 0.0315621
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0314316
UBA6 ubiquitin-like modifier activating enzyme 6 0.0311079
SOX9 SRY (sex determining region Y)-box 9 0.031047
MSI2 musashi RNA-binding protein 2 0.0306726
USP3 ubiquitin specific peptidase 3 0.0305562
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0298612
SSBP3 single stranded DNA binding protein 3 0.029813
KMT2E lysine (K)-specific methyltransferase 2E 0.0297956
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0296486
ASPH aspartate beta-hydroxylase 0.0292931
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.0291945
ITPRID2 ITPR interacting domain containing 2 0.0288974
GOLGA4 golgin A4 0.028742
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0287254
ARHGAP9 Rho GTPase activating protein 9 0.0286775
ERRFI1 ERBB receptor feedback inhibitor 1 0.0286641
TOP1 topoisomerase (DNA) I 0.0282597
VEGFA vascular endothelial growth factor A 0.0279878
USP34 ubiquitin specific peptidase 34 0.0275967
PICALM phosphatidylinositol binding clathrin assembly protein 0.0274789
RNF145 ring finger protein 145 0.0274569
SREBF2 sterol regulatory element binding transcription factor 2 0.0274535
SSBP2 single-stranded DNA binding protein 2 0.0265686
MYH9 myosin, heavy chain 9, non-muscle 0.0265544
KMT2C lysine (K)-specific methyltransferase 2C 0.0263326
DNMBP dynamin binding protein 0.0261352
HOOK2 hook microtubule-tethering protein 2 0.0258943
XPO1 exportin 1 0.0258671
ESYT2 extended synaptotagmin-like protein 2 0.025677
NUP58 nucleoporin 58 0.0253663
NAMPT nicotinamide phosphoribosyltransferase 0.0252829
PTK2 protein tyrosine kinase 2 0.025198
BIRC6 baculoviral IAP repeat containing 6 0.0248224
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.0245967
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0245764
CDH13 cadherin 13 0.0245022
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0237634
CENPF centromere protein F, 350/400kDa 0.0232824
PPARG peroxisome proliferator-activated receptor gamma 0.0232734
WAC WW domain containing adaptor with coiled-coil 0.0232625
MXI1 MAX interactor 1, dimerization protein 0.0230686
PHIP pleckstrin homology domain interacting protein 0.0230336
TRIB2 tribbles pseudokinase 2 0.0229222
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0226619
AFDN afadin, adherens junction formation factor 0.0224745
E2F7 E2F transcription factor 7 0.022446
SETD5 SET domain containing 5 0.0222456
ENAH enabled homolog (Drosophila) 0.0220824
COL18A1 collagen, type XVIII, alpha 1 0.0218268
JMJD1C jumonji domain containing 1C 0.021661
LOXL2 lysyl oxidase-like 2 0.0214601
QKI QKI, KH domain containing, RNA binding 0.0213985
PKM pyruvate kinase, muscle 0.0211679
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0211021
GLG1 golgi glycoprotein 1 0.0208801
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0208434
EPAS1 endothelial PAS domain protein 1 0.0205495
PREPL prolyl endopeptidase-like 0.0205391
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0205335
MACF1 microtubule-actin crosslinking factor 1 0.0205128
ZNF292 zinc finger protein 292 0.0204655
KDM6A lysine (K)-specific demethylase 6A 0.0203585
AKAP13 A kinase (PRKA) anchor protein 13 0.0203406
CSDE1 cold shock domain containing E1, RNA-binding 0.0202401
FLNB filamin B, beta 0.0202218
ANXA2 annexin A2 0.0200555
RNF24 ring finger protein 24 0.0199519
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 0.0194923
PDE8A phosphodiesterase 8A 0.0194632
SQSTM1 sequestosome 1 0.0194592
CCNY cyclin Y 0.0193226
DENND4C DENN/MADD domain containing 4C 0.0192915

decreased expression

Symbol Name Standardized Value
LSAMP limbic system-associated membrane protein -0.124524
IGF2 insulin-like growth factor 2 -0.115808
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.114227
SYT1 synaptotagmin I -0.0994376
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.082724
RPL19 ribosomal protein L19 -0.0813553
NRG1 neuregulin 1 -0.0753505
PTPRD protein tyrosine phosphatase, receptor type, D -0.0730633
TPST1 tyrosylprotein sulfotransferase 1 -0.0724876
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.064656
NCAM2 neural cell adhesion molecule 2 -0.0617825
RPL23 ribosomal protein L23 -0.0584971
COL1A1 collagen, type I, alpha 1 -0.0569509
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0517438
ACTG1 actin gamma 1 -0.0512947
NALF1 NALCN channel auxiliary factor 1 -0.0504138
BCAS3 breast carcinoma amplified sequence 3 -0.0501838
TMSB10 thymosin beta 10 -0.0496061
FRMD4A FERM domain containing 4A -0.0493975
BPTF bromodomain PHD finger transcription factor -0.0493625
RPL38 ribosomal protein L38 -0.0465962
KLHL13 kelch-like family member 13 -0.0457849
RPS6 ribosomal protein S6 -0.0454927
VCL vinculin -0.0443144
RNF213 ring finger protein 213 -0.0441355
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0440968
TLE4 transducin-like enhancer of split 4 -0.0439445
RPLP1 ribosomal protein, large, P1 -0.0436457
TPT1 tumor protein, translationally-controlled 1 -0.0428659
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0401546
ZNF804A zinc finger protein 804A -0.0398939
RPL35A ribosomal protein L35a -0.039442
COL4A5 collagen, type IV, alpha 5 -0.0394383
THSD4 thrombospondin, type I, domain containing 4 -0.0387653
PLPP1 phospholipid phosphatase 1 -0.0387415
RPL34 ribosomal protein L34 -0.0386318
SIK2 salt-inducible kinase 2 -0.0380224
ANTXR1 anthrax toxin receptor 1 -0.0378774
ZBTB20 zinc finger and BTB domain containing 20 -0.0378694
RPS19 ribosomal protein S19 -0.0370843
RPS24 ribosomal protein S24 -0.0368223
RPL7A ribosomal protein L7a -0.0360286
RPL36 ribosomal protein L36 -0.0355146
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0348285
CADM2 cell adhesion molecule 2 -0.0346887
PTMA prothymosin, alpha -0.0328895
RPL26 ribosomal protein L26 -0.0324213
EIF1 eukaryotic translation initiation factor 1 -0.032275
RPL12 ribosomal protein L12 -0.0321526
RPL37A ribosomal protein L37a -0.031781
GLCCI1 glucocorticoid induced 1 -0.0312735
CACNB2 calcium channel, voltage-dependent, beta 2 subunit -0.0312402
PTPRK protein tyrosine phosphatase, receptor type, K -0.0311133
RPLP0 ribosomal protein, large, P0 -0.030689
RPS27A ribosomal protein S27a -0.0306796
RPS29 ribosomal protein S29 -0.0305752
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0303859
RPS23 ribosomal protein S23 -0.0303228
GREM2 gremlin 2, DAN family BMP antagonist -0.0298776
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0293838
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0291919
DNAH14 dynein, axonemal, heavy chain 14 -0.0290232
DLC1 DLC1 Rho GTPase activating protein -0.0288732
NCOA7 nuclear receptor coactivator 7 -0.0288667
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0288517
EXT1 exostosin glycosyltransferase 1 -0.0287252
RPS3 ribosomal protein S3 -0.0285536
PDZRN3 PDZ domain containing ring finger 3 -0.0283597
IFI16 interferon, gamma-inducible protein 16 -0.0279966
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0273915
RALYL RALY RNA binding protein-like -0.0273611
ARID5B AT rich interactive domain 5B (MRF1-like) -0.027317
RPL36A ribosomal protein L36a -0.0271357
MAPK10 mitogen-activated protein kinase 10 -0.0271155
B2M beta-2-microglobulin -0.027007
RPL27 ribosomal protein L27 -0.0269618
RIGI RNA sensor RIG-I -0.0265014
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0263092
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0261804
NREP neuronal regeneration related protein -0.0260599
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 -0.0258499
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.025657
ARHGAP24 Rho GTPase activating protein 24 -0.0255673
MBD5 methyl-CpG binding domain protein 5 -0.0255368
PDE10A phosphodiesterase 10A -0.0255259
S100A9 S100 calcium binding protein A9 -0.0253105
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0252297
SP100 SP100 nuclear antigen -0.0249955
RPS27 ribosomal protein S27 -0.0248833
TPM1 tropomyosin 1 (alpha) -0.0248022
DNM3 dynamin 3 -0.0244089
RPS15 ribosomal protein S15 -0.0243665
UNC5C unc-5 homolog C (C. elegans) -0.023955
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0237141
RPS12 ribosomal protein S12 -0.02311
FHIT fragile histidine triad -0.0230712
CHD9 chromodomain helicase DNA binding protein 9 -0.0230373
RPL31 ribosomal protein L31 -0.0227836
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0225916
RPS21 ribosomal protein S21 -0.0221641