Niclosamide (olamine)_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Niclosamide (olamine) perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Niclosamide (olamine)_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.181915
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.089734
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0841914
GOLGA4 golgin A4 0.0826574
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0727327
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0698252
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0663484
GARS1 glycyl-tRNA synthetase 1 0.0644997
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0612908
DSCAM Down syndrome cell adhesion molecule 0.0597476
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0555267
FTH1 ferritin, heavy polypeptide 1 0.0548455
TXNRD1 thioredoxin reductase 1 0.0548157
RPL13A ribosomal protein L13a 0.0533436
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0516908
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0501376
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0496269
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0462524
EIF1 eukaryotic translation initiation factor 1 0.0462255
EREG epiregulin 0.0445551
TTC3 tetratricopeptide repeat domain 3 0.043787
RNF145 ring finger protein 145 0.0430324
ZFAND3 zinc finger, AN1-type domain 3 0.0421099
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0407494
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0403209
SQSTM1 sequestosome 1 0.0393231
RPS6 ribosomal protein S6 0.038427
EPS8 epidermal growth factor receptor pathway substrate 8 0.037718
SEC31A SEC31 homolog A (S. cerevisiae) 0.0372499
BRD2 bromodomain containing 2 0.0370251
GDF15 growth differentiation factor 15 0.0369979
ATXN1 ataxin 1 0.036332
OGA O-GlcNAcase 0.0354864
BTBD9 BTB (POZ) domain containing 9 0.0354738
DDIT4 DNA-damage-inducible transcript 4 0.0353028
USP3 ubiquitin specific peptidase 3 0.0351039
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0345681
RPS12 ribosomal protein S12 0.0339789
WAC WW domain containing adaptor with coiled-coil 0.0337582
RPL3 ribosomal protein L3 0.0328444
ANKRD11 ankyrin repeat domain 11 0.0327438
AKAP9 A kinase (PRKA) anchor protein 9 0.0322875
CANX calnexin 0.0322398
IARS1 isoleucyl-tRNA synthetase 1 0.0321104
EIF4A2 eukaryotic translation initiation factor 4A2 0.0320974
CCPG1 cell cycle progression 1 0.0320628
KMT2E lysine (K)-specific methyltransferase 2E 0.0317053
NDRG1 N-myc downstream regulated 1 0.03162
MYO6 myosin VI 0.0315727
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0314731
COPA coatomer protein complex, subunit alpha 0.0314061
JMY junction mediating and regulatory protein, p53 cofactor 0.0310755
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0310643
RPS2 ribosomal protein S2 0.0310301
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0306797
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0295763
XPOT exportin, tRNA 0.0288563
MON2 MON2 homolog (S. cerevisiae) 0.0287962
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0284234
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.0279666
HDLBP high density lipoprotein binding protein 0.0273315
RSRC2 arginine/serine-rich coiled-coil 2 0.0272461
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.027164
UBA6 ubiquitin-like modifier activating enzyme 6 0.0271531
AREG amphiregulin 0.0268436
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0266454
SRP54 signal recognition particle 54kDa 0.0263193
SUCO SUN domain containing ossification factor 0.0259521
FXR1 fragile X mental retardation, autosomal homolog 1 0.0259285
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0257288
RPL21 ribosomal protein L21 0.0256915
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0253567
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0252524
TMF1 TATA element modulatory factor 1 0.0251229
PNISR PNN-interacting serine/arginine-rich protein 0.0251194
KMT2C lysine (K)-specific methyltransferase 2C 0.025089
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0243731
MARS1 methionyl-tRNA synthetase 1 0.0239883
CARS1 cysteinyl-tRNA synthetase 1 0.0239506
KDM3A lysine (K)-specific demethylase 3A 0.0235999
TNIP1 TNFAIP3 interacting protein 1 0.0232373
TRA2A transformer 2 alpha homolog (Drosophila) 0.0231165
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.0230078
NAP1L1 nucleosome assembly protein 1-like 1 0.0228831
NKTR natural killer cell triggering receptor 0.0228797
MED13L mediator complex subunit 13-like 0.0226141
SEC24D SEC24 family member D 0.0223422
SPAG9 sperm associated antigen 9 0.0220043
TMEM41B transmembrane protein 41B 0.0217501
CALU calumenin 0.0216795
ATF4 activating transcription factor 4 0.0216111
RNMT RNA (guanine-7-) methyltransferase 0.0213584
LOC112694756 uncharaterized LOC112694756 0.0213065
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0212757
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0210813
SEC24A SEC24 family member A 0.0210565
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0208296
COPB1 coatomer protein complex, subunit beta 1 0.0208172
MORF4L2 mortality factor 4 like 2 0.0207571
PTEN phosphatase and tensin homolog 0.0207253

decreased expression

Symbol Name Standardized Value
THSD4 thrombospondin, type I, domain containing 4 -0.134123
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.111907
PDE4D phosphodiesterase 4D, cAMP-specific -0.0900858
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0875393
MYO1E myosin IE -0.0853265
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0696822
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0676365
PTPRR protein tyrosine phosphatase, receptor type, R -0.0653514
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0628233
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0620279
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0566573
MX1 MX dynamin-like GTPase 1 -0.0551878
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 -0.0530503
P3H2 prolyl 3-hydroxylase 2 -0.050447
IFI6 interferon, alpha-inducible protein 6 -0.0496494
TPT1 tumor protein, translationally-controlled 1 -0.0495958
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0487262
FRMD5 FERM domain containing 5 -0.0481769
F3 coagulation factor III (thromboplastin, tissue factor) -0.048167
RIGI RNA sensor RIG-I -0.047932
MSI2 musashi RNA-binding protein 2 -0.0479138
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.045941
SP100 SP100 nuclear antigen -0.0445706
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0444159
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0440001
TSPAN8 tetraspanin 8 -0.0431116
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0409288
RIMKLB ribosomal modification protein rimK-like family member B -0.0409198
SPON1 spondin 1, extracellular matrix protein -0.0408323
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0405109
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0387262
FOXP1 forkhead box P1 -0.0386538
AOPEP aminopeptidase O (putative) -0.0371343
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0368556
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0364428
VCL vinculin -0.0359763
PRSS3 protease, serine, 3 -0.0359737
FERMT1 fermitin family member 1 -0.0349408
RNF213 ring finger protein 213 -0.0344591
AKAP13 A kinase (PRKA) anchor protein 13 -0.0340609
PTPRK protein tyrosine phosphatase, receptor type, K -0.033945
MUC13 mucin 13, cell surface associated -0.0329678
SPINK13 serine peptidase inhibitor, Kazal type 13 (putative) -0.032577
PALLD palladin, cytoskeletal associated protein -0.032481
CLIC5 chloride intracellular channel 5 -0.0317222
GMDS GDP-mannose 4,6-dehydratase -0.0316893
ABHD17C abhydrolase domain containing 17C -0.0316258
RABGAP1L RAB GTPase activating protein 1-like -0.0315732
PERP PERP, TP53 apoptosis effector -0.0313917
IFI27 interferon, alpha-inducible protein 27 -0.0312579
LAMA4 laminin, alpha 4 -0.0304323
PLSCR1 phospholipid scramblase 1 -0.029944
LMO7 LIM domain 7 -0.0298144
NPSR1 neuropeptide S receptor 1 -0.0296606
XAF1 XIAP associated factor 1 -0.0290584
DSG3 desmoglein 3 -0.0284966
FHIT fragile histidine triad -0.0283539
MX2 MX dynamin-like GTPase 2 -0.0282366
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0281369
ACTN4 actinin, alpha 4 -0.0273059
ANXA11 annexin A11 -0.0272333
ITPRID2 ITPR interacting domain containing 2 -0.0270458
PKP2 plakophilin 2 -0.0269512
EPSTI1 epithelial stromal interaction 1 (breast) -0.0267387
UBE2H ubiquitin-conjugating enzyme E2H -0.0266426
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0263774
ZFP36L2 ZFP36 ring finger protein-like 2 -0.0259656
ATP10B ATPase, class V, type 10B -0.0259286
DOCK5 dedicator of cytokinesis 5 -0.0258947
PTPRG protein tyrosine phosphatase, receptor type, G -0.025754
COBL cordon-bleu WH2 repeat protein -0.0254187
SERINC5 serine incorporator 5 -0.0252495
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20 -0.0251574
DIAPH1 diaphanous-related formin 1 -0.0251449
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0250881
DIAPH2 diaphanous-related formin 2 -0.0250294
POTEF POTE ankyrin domain family, member F -0.0249948
PSD3 pleckstrin and Sec7 domain containing 3 -0.0249306
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 -0.0248963
RAD51B RAD51 paralog B -0.0247029
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0246962
DSG2 desmoglein 2 -0.0245138
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0244178
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.024277
CUX1 cut-like homeobox 1 -0.0240539
SVIL supervillin -0.0236631
MCU mitochondrial calcium uniporter -0.0236015
CCSER1 coiled-coil serine-rich protein 1 -0.0235398
MAML2 mastermind-like 2 (Drosophila) -0.023428
FAF1 Fas (TNFRSF6) associated factor 1 -0.023149
KLF3 Kruppel-like factor 3 (basic) -0.0231385
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0231348
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 -0.0231125
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 -0.0229303
MTAP methylthioadenosine phosphorylase -0.0227819
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0226868
SMYD3 SET and MYND domain containing 3 -0.0225346
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0223971
NT5C2 5'-nucleotidase, cytosolic II -0.0223609
TPM1 tropomyosin 1 (alpha) -0.0223416