Niclosamide (olamine)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Niclosamide (olamine) perturbation in RKO cell line (Tahoe Therapeutics)
Similar Terms
Downloads & Tools

Genes

200 genes differentially expressed following the Niclosamide (olamine)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.120468
EEF2 eukaryotic translation elongation factor 2 0.101277
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0924742
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0854151
ACTG1 actin gamma 1 0.0771432
LOC112694756 uncharaterized LOC112694756 0.0644034
JMJD1C jumonji domain containing 1C 0.0608041
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0587916
PGK1 phosphoglycerate kinase 1 0.0530309
SAMD4A sterile alpha motif domain containing 4A 0.0520075
EXT1 exostosin glycosyltransferase 1 0.0508536
FRMD4A FERM domain containing 4A 0.05037
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0496203
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.0474282
NDRG1 N-myc downstream regulated 1 0.0469617
LAMB3 laminin, beta 3 0.046235
NUP58 nucleoporin 58 0.0452715
KDM3A lysine (K)-specific demethylase 3A 0.0441066
ZNF292 zinc finger protein 292 0.0427098
FRMD6 FERM domain containing 6 0.0417584
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0411481
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0405577
FKBP15 FK506 binding protein 15, 133kDa 0.0375974
OGA O-GlcNAcase 0.0365108
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0364722
ARFGEF3 ARFGEF family member 3 0.036118
PRELID2 PRELI domain containing 2 0.0354949
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0354902
CALD1 caldesmon 1 0.0346961
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0340045
TTR transthyretin 0.0340033
ELL2 elongation factor, RNA polymerase II, 2 0.0334448
CALU calumenin 0.0329693
TPD52 tumor protein D52 0.0326433
CAPRIN2 caprin family member 2 0.0319689
FLNA filamin A, alpha 0.0319194
TMF1 TATA element modulatory factor 1 0.0302734
MCTP1 multiple C2 domains, transmembrane 1 0.0302262
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0298469
GOLGA2 golgin A2 0.029553
RNMT RNA (guanine-7-) methyltransferase 0.0293796
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0289938
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0289656
SEC31A SEC31 homolog A (S. cerevisiae) 0.028658
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0283543
LDHA lactate dehydrogenase A 0.0276205
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0270966
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0267453
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0255032
HOOK2 hook microtubule-tethering protein 2 0.0252832
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0252027
WDR26 WD repeat domain 26 0.0251382
BLZF1 basic leucine zipper nuclear factor 1 0.0250586
CANX calnexin 0.0246626
PHF3 PHD finger protein 3 0.0236643
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.023564
RPL13A ribosomal protein L13a 0.0232347
BHLHE40 basic helix-loop-helix family, member e40 0.0231945
WDR45B WD repeat domain 45B 0.0230941
YEATS2 YEATS domain containing 2 0.0230875
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0230469
ENO2 enolase 2 (gamma, neuronal) 0.022965
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 0.0225596
GPATCH2L G patch domain containing 2-like 0.0223904
DGKI diacylglycerol kinase, iota 0.0222387
CREB5 cAMP responsive element binding protein 5 0.022173
NABP1 nucleic acid binding protein 1 0.0219808
BTBD9 BTB (POZ) domain containing 9 0.0218443
KDM7A lysine (K)-specific demethylase 7A 0.0216281
UBA6 ubiquitin-like modifier activating enzyme 6 0.0215819
RB1CC1 RB1-inducible coiled-coil 1 0.020251
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0202219
CCDC47 coiled-coil domain containing 47 0.0201147
TM4SF19 transmembrane 4 L six family member 19 0.0198775
TMEM263 transmembrane protein 263 0.0196055
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0194931
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.019289
PRKCE protein kinase C, epsilon 0.0188465
DSCAM Down syndrome cell adhesion molecule 0.0186384
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 0.0185616
AKAP9 A kinase (PRKA) anchor protein 9 0.0185329
TUT7 terminal uridylyl transferase 7 0.0184197
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0174982
SETX senataxin 0.017018
MAP2K1 mitogen-activated protein kinase kinase 1 0.0166507
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0165872
KDM2A lysine (K)-specific demethylase 2A 0.0164752
CEP135 centrosomal protein 135kDa 0.0163663
CEP95 centrosomal protein 95kDa 0.0163375
ENO1 enolase 1, (alpha) 0.0163132
SUCO SUN domain containing ossification factor 0.0162717
TAOK1 TAO kinase 1 0.016224
HDLBP high density lipoprotein binding protein 0.0161311
KDM5C lysine (K)-specific demethylase 5C 0.0160098
COPB1 coatomer protein complex, subunit beta 1 0.0159785
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0158387
MIMS1 mitochondrial inner membrane scaffold 1 0.0156242
INSIG2 insulin induced gene 2 0.0153974
CLTC clathrin, heavy chain (Hc) 0.015381
HLA-A major histocompatibility complex, class I, A 0.0151929

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.14568
NAV3 neuron navigator 3 -0.0902752
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0876654
TXNRD1 thioredoxin reductase 1 -0.0698508
ZFAND3 zinc finger, AN1-type domain 3 -0.0690501
PTK2 protein tyrosine kinase 2 -0.0617123
RPL35A ribosomal protein L35a -0.0601482
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.059252
WDR43 WD repeat domain 43 -0.0558021
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.055336
WAC WW domain containing adaptor with coiled-coil -0.0512375
SRPK2 SRSF protein kinase 2 -0.0491847
HMGA1 high mobility group AT-hook 1 -0.0476871
PTMA prothymosin, alpha -0.0468936
ZEB1 zinc finger E-box binding homeobox 1 -0.0451029
IARS1 isoleucyl-tRNA synthetase 1 -0.0444225
IPO7 importin 7 -0.0442224
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0432604
ATP13A3 ATPase type 13A3 -0.0403619
RPS21 ribosomal protein S21 -0.0382588
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0371165
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0371073
TMSB10 thymosin beta 10 -0.0368653
OLA1 Obg-like ATPase 1 -0.0366224
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0366173
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0363015
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0360475
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.034808
RPL23 ribosomal protein L23 -0.0346352
MATR3 matrin 3 -0.0343727
RPS6 ribosomal protein S6 -0.0343718
NCKAP1 NCK-associated protein 1 -0.0342615
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0335831
TCF12 transcription factor 12 -0.0330122
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0329303
CELF1 CUGBP, Elav-like family member 1 -0.0324315
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0319735
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0318919
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0318562
ATAD2 ATPase family, AAA domain containing 2 -0.0315944
NUP153 nucleoporin 153kDa -0.0312517
PUM2 pumilio RNA-binding family member 2 -0.0308655
GPHN gephyrin -0.0306608
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0305885
CNOT4 CCR4-NOT transcription complex, subunit 4 -0.0305647
PARD3 par-3 family cell polarity regulator -0.0303455
DIAPH3 diaphanous-related formin 3 -0.0303008
RBM25 RNA binding motif protein 25 -0.0299104
ECPAS Ecm29 proteasome adaptor and scaffold -0.0299048
PFN1 profilin 1 -0.0295806
PUM1 pumilio RNA-binding family member 1 -0.0294463
IFI16 interferon, gamma-inducible protein 16 -0.0290871
PA2G4 proliferation-associated 2G4, 38kDa -0.0290334
NOP58 NOP58 ribonucleoprotein -0.0288026
RPS24 ribosomal protein S24 -0.0285662
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0284671
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0282081
RPL8 ribosomal protein L8 -0.0277445
NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit -0.0274256
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0272258
CHD1 chromodomain helicase DNA binding protein 1 -0.0272096
RHEB Ras homolog enriched in brain -0.027053
FAF1 Fas (TNFRSF6) associated factor 1 -0.0269455
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0268242
PDS5B PDS5 cohesin associated factor B -0.0267526
PKM pyruvate kinase, muscle -0.02674
TOP1 topoisomerase (DNA) I -0.02665
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0264336
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit -0.0262867
RPLP1 ribosomal protein, large, P1 -0.0262839
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit -0.0262219
UBE2K ubiquitin-conjugating enzyme E2K -0.0261954
ACACA acetyl-CoA carboxylase alpha -0.0261249
PTBP2 polypyrimidine tract binding protein 2 -0.0260025
SLMAP sarcolemma associated protein -0.0257227
RAB3IP RAB3A interacting protein -0.0256908
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0256454
KPNB1 karyopherin (importin) beta 1 -0.0254506
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0251685
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.0251207
TRA2A transformer 2 alpha homolog (Drosophila) -0.02512
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0250351
NPEPPS aminopeptidase puromycin sensitive -0.0247525
SRPK1 SRSF protein kinase 1 -0.0247502
ANTXR2 anthrax toxin receptor 2 -0.0247438
RASA2 RAS p21 protein activator 2 -0.0246678
GPBP1 GC-rich promoter binding protein 1 -0.0245673
EIF5B eukaryotic translation initiation factor 5B -0.0245151
FTL ferritin, light polypeptide -0.0244832
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0243915
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like -0.024058
RPL35 ribosomal protein L35 -0.0239611
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0238531
RPS19 ribosomal protein S19 -0.0238382
NOP56 NOP56 ribonucleoprotein -0.0236166
SLC38A1 solute carrier family 38, member 1 -0.0234604
IFI6 interferon, alpha-inducible protein 6 -0.0232293
RPLP2 ribosomal protein, large, P2 -0.0231838
PDIA3 protein disulfide isomerase family A, member 3 -0.0231488
SPIDR scaffolding protein involved in DNA repair -0.0231328