Nucleoid Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores 2025
Category structural or functional annotations
Type cellular component
Description The region of a virus, bacterial cell, mitochondrion or chloroplast to which the nucleic acid is confined. (Gene Ontology, GO_0009295)
External Link http://amigo.geneontology.org/amigo/term/GO:0009295
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Genes

44 proteins localized to the Nucleoid cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.

Symbol Name Standardized Value
ELAC2 elaC ribonuclease Z 2 5.0
GRSF1 G-rich RNA sequence binding factor 1 5.0
HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10 5.0
TRMT10C tRNA methyltransferase 10 homolog C (S. cerevisiae) 5.0
POLK polymerase (DNA directed) kappa 5.0
FASTKD2 FAST kinase domains 2 5.0
DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30 5.0
FASTKD5 FAST kinase domains 5 5.0
SSBP1 single-stranded DNA binding protein 1, mitochondrial 5.0
DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 5.0
UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 5.0
PIF1 PIF1 5'-to-3' DNA helicase 5.0
TFAM transcription factor A, mitochondrial 5.0
TWNK twinkle mtDNA helicase 5.0
TEFM transcription elongation factor, mitochondrial 5.0
DNA2 DNA replication helicase/nuclease 2 5.0
HSPA9 heat shock 70kDa protein 9 (mortalin) 4.0
TERT telomerase reverse transcriptase 4.0
TUFM Tu translation elongation factor, mitochondrial 4.0
TOP1MT topoisomerase (DNA) I, mitochondrial 4.0
POLGARF POLG alternative reading frame 4.0
ATP5F1B ATP synthase F1 subunit beta 4.0
POLG2 polymerase (DNA directed), gamma 2, accessory subunit 4.0
VDAC1 voltage-dependent anion channel 1 4.0
VDAC2 voltage-dependent anion channel 2 4.0
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 4.0
LRRC59 leucine rich repeat containing 59 4.0
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 4.0
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 4.0
TFB2M transcription factor B2, mitochondrial 4.0
POLDIP2 polymerase (DNA-directed), delta interacting protein 2 4.0
ACADVL acyl-CoA dehydrogenase, very long chain 4.0
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 4.0
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) 4.0
LONP1 lon peptidase 1, mitochondrial 4.0
PM20D1 peptidase M20 domain containing 1 4.0
DBT dihydrolipoamide branched chain transacylase E2 4.0
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 4.0
POLRMT polymerase (RNA) mitochondrial (DNA directed) 4.0
MTERF2 mitochondrial transcription termination factor 2 4.0
MTERF1 mitochondrial transcription termination factor 1 4.0
TFB1M transcription factor B1, mitochondrial 4.0
LRPPRC leucine-rich pentatricopeptide repeat containing 4.0
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) 4.0