Nucleoli Gene Set

Dataset CM4AI U2OS Cell Map Protein Localization Assemblies
Category structural or functional annotations
Type biological term
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Genes

410 proteins comprising Nucleoli assembly using integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset.

Symbol Name
AATF apoptosis antagonizing transcription factor
ABT1 activator of basal transcription 1
ACSF2 acyl-CoA synthetase family member 2
ACTL6B actin-like 6B
ADAR adenosine deaminase, RNA-specific
ADARB1 adenosine deaminase, RNA-specific, B1
AGO4 argonaute RISC catalytic component 4
AGTPBP1 ATP/GTP binding protein 1
AK8 adenylate kinase 8
ANKZF1 ankyrin repeat and zinc finger domain containing 1
APLF aprataxin and PNKP like factor
AQR aquarius intron-binding spliceosomal factor
ARL6IP4 ADP-ribosylation factor-like 6 interacting protein 4
ASCC1 activating signal cointegrator 1 complex subunit 1
ASCC2 activating signal cointegrator 1 complex subunit 2
ASCC3 activating signal cointegrator 1 complex subunit 3
ASXL1 additional sex combs like transcriptional regulator 1
ATXN7L2 ataxin 7-like 2
BBX bobby sox homolog (Drosophila)
BCAS3 breast carcinoma amplified sequence 3
BLM Bloom syndrome, RecQ helicase-like
BMS1 BMS1 ribosome biogenesis factor
BOP1 block of proliferation 1
BUD13 BUD13 homolog (S. cerevisiae)
C12ORF43 chromosome 12 open reading frame 43
C19ORF53 chromosome 19 open reading frame 53
C1D C1D nuclear receptor corepressor
C1ORF174 chromosome 1 open reading frame 174
C8ORF33 chromosome 8 open reading frame 33
CABLES2 Cdk5 and Abl enzyme substrate 2
CAMLG calcium modulating ligand
CAPSL calcyphosine-like
CAVIN1 caveolae associated protein 1
CBX2 chromobox homolog 2
CBX4 chromobox homolog 4
CBX5 chromobox homolog 5
CBX6 chromobox homolog 6
CBX8 chromobox homolog 8
CCDC137 coiled-coil domain containing 137
CCDC174 coiled-coil domain containing 174
CCDC59 coiled-coil domain containing 59
CDCA8 cell division cycle associated 8
CDKN2AIP CDKN2A interacting protein
CENATAC centrosomal AT-AC splicing factor
CENPB centromere protein B, 80kDa
CENPC centromere protein C
CENPH centromere protein H
CENPN centromere protein N
CENPP centromere protein P
CGGBP1 CGG triplet repeat binding protein 1
CHD7 chromodomain helicase DNA binding protein 7
CTCF CCCTC-binding factor (zinc finger protein)
DAXX death-domain associated protein
DCAF1 DDB1 and CUL4 associated factor 1
DDA1 DET1 and DDB1 associated 1
DDX10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24
DDX27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
DDX49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56
DGCR8 DGCR8 microprocessor complex subunit
DHX33 DEAH (Asp-Glu-Ala-His) box polypeptide 33
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36
DHX37 DEAH (Asp-Glu-Ala-His) box polypeptide 37
DHX57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DLGAP5 discs, large (Drosophila) homolog-associated protein 5
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21
DNMBP dynamin binding protein
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2
DSCAM Down syndrome cell adhesion molecule
DTWD1 DTW domain containing 1
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
ECT2 epithelial cell transforming 2
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
EIPR1 EARP complex and GARP complex interacting protein 1
ELL3 elongation factor RNA polymerase II-like 3
ELOA elongin A
ENKD1 enkurin domain containing 1
ENSA endosulfine alpha
ERI1 exoribonuclease 1
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
EXOSC2 exosome component 2
EXOSC3 exosome component 3
EXOSC5 exosome component 5
FAM111B family with sequence similarity 111, member B
FAM32A family with sequence similarity 32, member A
FBXL17 F-box and leucine-rich repeat protein 17
FCF1 FCF1 rRNA-processing protein
FIZ1 FLT3-interacting zinc finger 1
FKBP15 FK506 binding protein 15, 133kDa
FOXM1 forkhead box M1
GLCCI1 glucocorticoid induced 1
GLE1 GLE1 RNA export mediator
GLI2 GLI family zinc finger 2
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
GNL2 guanine nucleotide binding protein-like 2 (nucleolar)
GON4L gon-4-like (C. elegans)
GON7 GON7 subunit of KEOPS complex
GPALPP1 GPALPP motifs containing 1
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa
GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa
GTPBP2 GTP binding protein 2
GTPBP4 GTP binding protein 4
GZF1 GDNF-inducible zinc finger protein 1
H1-1 H1.1 linker histone, cluster member
H1-2 H1.2 linker histone, cluster member
H2AX H2A.X variant histone
HELZ helicase with zinc finger
HMGA1 high mobility group AT-hook 1
HMGB2 high mobility group box 2
HNRNPM heterogeneous nuclear ribonucleoprotein M
HOMEZ homeobox and leucine zipper encoding
HPSE heparanase
HSBP1 heat shock factor binding protein 1
IFI16 interferon, gamma-inducible protein 16
ILF3 interleukin enhancer binding factor 3, 90kDa
IMP4 IMP4, U3 small nucleolar ribonucleoprotein
INCENP inner centromere protein antigens 135/155kDa
ING4 inhibitor of growth family, member 4
INO80E INO80 complex subunit E
IQGAP3 IQ motif containing GTPase activating protein 3
JADE3 jade family PHD finger 3
JRK Jrk homolog (mouse)
KAT2B K(lysine) acetyltransferase 2B
KAT7 K(lysine) acetyltransferase 7
KDM6A lysine (K)-specific demethylase 6A
KIF18B kinesin family member 18B
KNOP1 lysine-rich nucleolar protein 1
KRI1 KRI1 homolog (S. cerevisiae)
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)
LARP4B La ribonucleoprotein domain family, member 4B
LARP7 La ribonucleoprotein domain family, member 7
LAS1L LAS1-like (S. cerevisiae)
LIN28B lin-28 homolog B (C. elegans)
LLGL2 lethal giant larvae homolog 2 (Drosophila)
LRRC40 leucine rich repeat containing 40
LRWD1 leucine-rich repeats and WD repeat domain containing 1
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae)
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LTV1 LTV1 ribosome biogenesis factor
LYAR Ly1 antibody reactive
MACROH2A2 macroH2A.2 histone
MAGEB2 melanoma antigen family B2
MALT1 MALT1 paracaspase
MAPK13 mitogen-activated protein kinase 13
MBTD1 mbt domain containing 1
MCEE methylmalonyl CoA epimerase
MCM10 minichromosome maintenance complex component 10
MDC1 mediator of DNA-damage checkpoint 1
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MDM4 MDM4, p53 regulator
MECP2 methyl CpG binding protein 2
MED12L mediator complex subunit 12-like
METTL17 methyltransferase like 17
METTL18 methyltransferase like 18
MIDEAS mitotic deacetylase associated SANT domain protein
MKI67 marker of proliferation Ki-67
MKRN2 makorin ring finger protein 2
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
MPHOSPH6 M-phase phosphoprotein 6
MPHOSPH8 M-phase phosphoprotein 8
MRPL13 mitochondrial ribosomal protein L13
MTDH metadherin
MTHFSD methenyltetrahydrofolate synthetase domain containing
MTUS1 microtubule associated tumor suppressor 1
MYEF2 myelin expression factor 2
MYH15 myosin, heavy chain 15
N4BP2 NEDD4 binding protein 2
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NAT10 N-acetyltransferase 10 (GCN5-related)
NCAPD2 non-SMC condensin I complex, subunit D2
NGDN neuroguidin, EIF4E binding protein
NIFK nucleolar protein interacting with the FHA domain of MKI67
NIN ninein (GSK3B interacting protein)
NKAPD1 NKAP domain containing 1
NKIRAS2 NFKB inhibitor interacting Ras-like 2
NKRF NFKB repressing factor
NLE1 notchless homolog 1 (Drosophila)
NLRP2B NLR family pyrin domain containing 2B
NMD3 NMD3 ribosome export adaptor
NOC4L nucleolar complex associated 4 homolog (S. cerevisiae)
NOL10 nucleolar protein 10
NOL11 nucleolar protein 11
NOL12 nucleolar protein 12
NOL6 nucleolar protein 6 (RNA-associated)
NOL7 nucleolar protein 7, 27kDa
NOL8 nucleolar protein 8
NOLC1 nucleolar and coiled-body phosphoprotein 1
NOM1 nucleolar protein with MIF4G domain 1
NOP14 NOP14 nucleolar protein
NOP16 NOP16 nucleolar protein
NOP53 NOP53 ribosome biogenesis factor
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NPM3 nucleophosmin/nucleoplasmin 3
NPR1 natriuretic peptide receptor 1
NSD1 nuclear receptor binding SET domain protein 1
NSD2 nuclear receptor binding SET domain protein 2
NSUN5 NOP2/Sun domain family, member 5
NUDT8 nudix (nucleoside diphosphate linked moiety X)-type motif 8
NUSAP1 nucleolar and spindle associated protein 1
NXF1 nuclear RNA export factor 1
NXT1 nuclear transport factor 2-like export factor 1
OASL 2'-5'-oligoadenylate synthetase-like
OSMR oncostatin M receptor
P3H3 prolyl 3-hydroxylase 3
PARP10 poly (ADP-ribose) polymerase family, member 10
PARP12 poly (ADP-ribose) polymerase family, member 12
PARP2 poly (ADP-ribose) polymerase 2
PCDH1 protocadherin 1
PDGFRL platelet-derived growth factor receptor-like
PES1 pescadillo ribosomal biogenesis factor 1
PHC2 polyhomeotic homolog 2 (Drosophila)
PHC3 polyhomeotic homolog 3 (Drosophila)
PHF10 PHD finger protein 10
PHF2 PHD finger protein 2
PHF6 PHD finger protein 6
PJA1 praja ring finger 1, E3 ubiquitin protein ligase
PM20D1 peptidase M20 domain containing 1
POP5 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)
PPP1R7 protein phosphatase 1, regulatory subunit 7
PRDM10 PR domain containing 10
PRKCZ protein kinase C, zeta
PRPF38A pre-mRNA processing factor 38A
PRR3 proline rich 3
PRRC2C proline-rich coiled-coil 2C
PURG purine-rich element binding protein G
PYDC1 PYD (pyrin domain) containing 1
PYM1 PYM homolog 1, exon junction complex associated factor
QTGAL queuosine-tRNA galactosyltransferase
RAB8A RAB8A, member RAS oncogene family
RBBP5 retinoblastoma binding protein 5
RBBP6 retinoblastoma binding protein 6
RBM19 RNA binding motif protein 19
RBM28 RNA binding motif protein 28
RBM34 RNA binding motif protein 34
RBM45 RNA binding motif protein 45
RBMX2 RNA binding motif protein, X-linked 2
RCC1L RCC1 like
RECQL4 RecQ protein-like 4
REXO4 REX4, RNA exonuclease 4 homolog (S. cerevisiae)
RIOX1 ribosomal oxygenase 1
RIOX2 ribosomal oxygenase 2
RMP24 ribonuclease MRP subunit p24
RMP64 ribonuclease MRP subunit p64
RPF1 ribosome production factor 1 homolog (S. cerevisiae)
RPL10A ribosomal protein L10a
RPL14 ribosomal protein L14
RPL18 ribosomal protein L18
RPL18A ribosomal protein L18a
RPL19 ribosomal protein L19
RPL22 ribosomal protein L22
RPL26 ribosomal protein L26
RPL3 ribosomal protein L3
RPL37A ribosomal protein L37a
RPL4 ribosomal protein L4
RPL5 ribosomal protein L5
RPP25L ribonuclease P/MRP 25kDa subunit-like
RPP30 ribonuclease P/MRP 30kDa subunit
RPP38 ribonuclease P/MRP 38kDa subunit
RPS14 ribosomal protein S14
RPS15 ribosomal protein S15
RPS16 ribosomal protein S16
RPS17 ribosomal protein S17
RPS19 ribosomal protein S19
RPS19BP1 ribosomal protein S19 binding protein 1
RPS3A ribosomal protein S3A
RPS5 ribosomal protein S5
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3
RPS7 ribosomal protein S7
RRP1B ribosomal RNA processing 1B
RRP36 ribosomal RNA processing 36 homolog (S. cerevisiae)
RRP7A ribosomal RNA processing 7 homolog A (S. cerevisiae)
RRP8 ribosomal RNA processing 8, methyltransferase, homolog (yeast)
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
RSBN1 round spermatid basic protein 1
RSL1D1 ribosomal L1 domain containing 1
SDAD1 SDA1 domain containing 1
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
SENP3 SUMO1/sentrin/SMT3 specific peptidase 3
SETD7 SET domain containing (lysine methyltransferase) 7
SETX senataxin
SF3B3 splicing factor 3b, subunit 3, 130kDa
SFR1 SWI5-dependent recombination repair 1
SGF29 SAGA complex associated factor 29
SLBP stem-loop binding protein
SLX9 SLX9 ribosome biogenesis factor
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
SMG6 SMG6 nonsense mediated mRNA decay factor
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa
SND1 staphylococcal nuclease and tudor domain containing 1
SPATS2 spermatogenesis associated, serine-rich 2
SPC24 SPC24, NDC80 kinetochore complex component
SPIN4 spindlin family, member 4
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
SRBD1 S1 RNA binding domain 1
SRFBP1 serum response factor binding protein 1
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein)
SRP68 signal recognition particle 68kDa
SRPK2 SRSF protein kinase 2
SRSF5 serine/arginine-rich splicing factor 5
STK35 serine/threonine kinase 35
STON2 stonin 2
SUGP2 SURP and G patch domain containing 2
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
SURF2 surfeit 2
SURF6 surfeit 6
SZRD1 SUZ RNA binding domain containing 1
TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa
TARBP2 TAR (HIV-1) RNA binding protein 2
TASOR2 transcription activation suppressor family member 2
TBL3 transducin (beta)-like 3
TEFM transcription elongation factor, mitochondrial
TENM2 teneurin transmembrane protein 2
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TET2 tet methylcytosine dioxygenase 2
THAP11 THAP domain containing 11
THAP12 THAP domain containing 12
THUMPD1 THUMP domain containing 1
TMA16 translation machinery associated 16 homolog (S. cerevisiae)
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial)
TNNI1 troponin I type 1 (skeletal, slow)
TOP2A topoisomerase (DNA) II alpha 170kDa
TOP2B topoisomerase (DNA) II beta 180kDa
TP53 tumor protein p53
TP53TG5 TP53 target 5
TRIM56 tripartite motif containing 56
TRIP4 thyroid hormone receptor interactor 4
TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like
TRMT6 tRNA methyltransferase 6
TSPYL1 TSPY-like 1
TTF1 transcription termination factor, RNA polymerase I
TUT7 terminal uridylyl transferase 7
TYW1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
UBE2I ubiquitin-conjugating enzyme E2I
UBE2O ubiquitin-conjugating enzyme E2O
UBE2T ubiquitin-conjugating enzyme E2T
UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative)
UCHL5 ubiquitin carboxyl-terminal hydrolase L5
UHRF1 ubiquitin-like with PHD and ring finger domains 1
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast)
URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
USP21 ubiquitin specific peptidase 21
USP36 ubiquitin specific peptidase 36
USP37 ubiquitin specific peptidase 37
UTP11 UTP11 small subunit processome component
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast)
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
UTP4 UTP4 small subunit processome component
UTP6 UTP6, small subunit (SSU) processome component, homolog (yeast)
VSX1 visual system homeobox 1
WASL Wiskott-Aldrich syndrome-like
WDCP WD repeat and coiled coil containing
WDR3 WD repeat domain 3
WDR36 WD repeat domain 36
WDR55 WD repeat domain 55
WDR76 WD repeat domain 76
XDH xanthine dehydrogenase
XPC xeroderma pigmentosum, complementation group C
YTHDC2 YTH domain containing 2
ZBTB11 zinc finger and BTB domain containing 11
ZC2HC1A zinc finger, C2HC-type containing 1A
ZC3H7B zinc finger CCCH-type containing 7B
ZC3H8 zinc finger CCCH-type containing 8
ZCCHC10 zinc finger, CCHC domain containing 10
ZCCHC7 zinc finger, CCHC domain containing 7
ZCCHC9 zinc finger, CCHC domain containing 9
ZFP62 ZFP62 zinc finger protein
ZFP64 ZFP64 zinc finger protein
ZFP91 ZFP91 zinc finger protein
ZKSCAN8 zinc finger with KRAB and SCAN domains 8
ZMYND8 zinc finger, MYND-type containing 8
ZNF16 zinc finger protein 16
ZNF276 zinc finger protein 276
ZNF346 zinc finger protein 346
ZNF354C zinc finger protein 354C
ZNF358 zinc finger protein 358
ZNF384 zinc finger protein 384
ZNF385A zinc finger protein 385A
ZNF397 zinc finger protein 397
ZNF414 zinc finger protein 414
ZNF574 zinc finger protein 574
ZNF593 zinc finger protein 593
ZNF668 zinc finger protein 668
ZNF689 zinc finger protein 689
ZNF692 zinc finger protein 692
ZNF696 zinc finger protein 696
ZNF768 zinc finger protein 768
ZNF771 zinc finger protein 771
ZNF787 zinc finger protein 787
ZNF800 zinc finger protein 800
ZNF865 zinc finger protein 865
ZSCAN25 zinc finger and SCAN domain containing 25
ZSCAN26 zinc finger and SCAN domain containing 26