OTS514_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description OTS514 perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the OTS514_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.196623
CAPRIN2 caprin family member 2 0.0878577
EEF1G eukaryotic translation elongation factor 1 gamma 0.0846412
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0739134
HMGA1 high mobility group AT-hook 1 0.0734052
WWTR1 WW domain containing transcription regulator 1 0.0704376
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0605912
EEF2 eukaryotic translation elongation factor 2 0.0556334
FTH1 ferritin, heavy polypeptide 1 0.0550601
MT1E metallothionein 1E 0.0547151
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0472233
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0470898
TM4SF1 transmembrane 4 L six family member 1 0.0458582
CCNL1 cyclin L1 0.0428708
SLC38A2 solute carrier family 38, member 2 0.0414778
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0405854
RPS6 ribosomal protein S6 0.0399873
TTC3 tetratricopeptide repeat domain 3 0.0361074
PABPC1 poly(A) binding protein, cytoplasmic 1 0.035632
NPAS2 neuronal PAS domain protein 2 0.0344628
TMEM41B transmembrane protein 41B 0.0321025
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0313624
CAPN2 calpain 2, (m/II) large subunit 0.0312236
CALU calumenin 0.0301588
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0293232
MT2A metallothionein 2A 0.028097
PODXL podocalyxin-like 0.0280237
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0279617
SEC24A SEC24 family member A 0.0271261
RPL37A ribosomal protein L37a 0.0258674
MT1X metallothionein 1X 0.025855
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0254482
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0250688
TXNRD1 thioredoxin reductase 1 0.0248334
PXDN peroxidasin 0.0243521
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0243295
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0239018
EGR1 early growth response 1 0.0236897
ENO2 enolase 2 (gamma, neuronal) 0.0236311
USP12 ubiquitin specific peptidase 12 0.0224871
RPL23 ribosomal protein L23 0.0224798
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0218574
HSPA8 heat shock 70kDa protein 8 0.0214016
RTN4 reticulon 4 0.021144
SEC31A SEC31 homolog A (S. cerevisiae) 0.0211068
COPA coatomer protein complex, subunit alpha 0.0210526
RPL27 ribosomal protein L27 0.0209003
TXNIP thioredoxin interacting protein 0.0208236
TUBB6 tubulin, beta 6 class V 0.0207869
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 0.0207602
KMT2E lysine (K)-specific methyltransferase 2E 0.0206073
CALR calreticulin 0.0205574
ARHGAP5 Rho GTPase activating protein 5 0.0202716
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0202182
ESYT2 extended synaptotagmin-like protein 2 0.0197432
RPL37 ribosomal protein L37 0.0196863
PDIA3 protein disulfide isomerase family A, member 3 0.0194361
NIBAN2 niban apoptosis regulator 2 0.0193376
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0192517
ANGPTL4 angiopoietin-like 4 0.0190875
RPS12 ribosomal protein S12 0.0190719
RAI1 retinoic acid induced 1 0.0189144
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.018746
RPL9 ribosomal protein L9 0.0187338
LOXL2 lysyl oxidase-like 2 0.0186405
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.018627
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0186158
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy 0.0184919
LDHA lactate dehydrogenase A 0.0183066
RNASEH2A ribonuclease H2, subunit A 0.0180249
TGM2 transglutaminase 2 0.0178291
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0177763
WARS1 tryptophanyl-tRNA synthetase 1 0.0176898
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 0.0176598
RPS25 ribosomal protein S25 0.0175865
RPL35A ribosomal protein L35a 0.0175841
TPT1 tumor protein, translationally-controlled 1 0.0175802
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0174078
FOSL1 FOS-like antigen 1 0.0173018
RPL4 ribosomal protein L4 0.0171067
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0169295
RPL36 ribosomal protein L36 0.0166099
RPS13 ribosomal protein S13 0.0162351
RPL30 ribosomal protein L30 0.0158496
SFTPA2 surfactant protein A2 0.0155556
BCAR3 breast cancer anti-estrogen resistance 3 0.0151699
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0150189
CAMTA1 calmodulin binding transcription activator 1 0.0149677
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0149114
RPL36A ribosomal protein L36a 0.0148714
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0148484
CD68 CD68 molecule 0.0146106
PGM3 phosphoglucomutase 3 0.0146083
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0145935
TENT4A terminal nucleotidyltransferase 4A 0.01425
RAP2B RAP2B, member of RAS oncogene family 0.0142123
RPS27 ribosomal protein S27 0.0141072
USP36 ubiquitin specific peptidase 36 0.0140627
PCDH1 protocadherin 1 0.0139292
BARX2 BARX homeobox 2 0.0139191

decreased expression

Symbol Name Standardized Value
TP63 tumor protein p63 -0.148307
TMSB4X thymosin beta 4, X-linked -0.117599
PTMA prothymosin, alpha -0.112727
TMSB10 thymosin beta 10 -0.111281
VIM vimentin -0.105803
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0967924
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0924776
RAD51B RAD51 paralog B -0.0896265
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.073655
EHBP1 EH domain binding protein 1 -0.0680756
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0673572
FMNL2 formin-like 2 -0.0627586
DPYD dihydropyrimidine dehydrogenase -0.0619192
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.061117
EXOC4 exocyst complex component 4 -0.0585179
CFAP299 cilia and flagella associated protein 299 -0.0580645
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0573207
CADM2 cell adhesion molecule 2 -0.0561344
DLG1 discs, large homolog 1 (Drosophila) -0.0500196
RIGI RNA sensor RIG-I -0.0497374
DST dystonin -0.0483712
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0479048
TNS3 tensin 3 -0.047331
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0471802
AHNAK AHNAK nucleoprotein -0.0460979
PRELID2 PRELI domain containing 2 -0.0458514
DPH6 diphthamine biosynthesis 6 -0.0454436
ZNF217 zinc finger protein 217 -0.0449378
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0420222
CD44 CD44 molecule (Indian blood group) -0.041341
PTK2 protein tyrosine kinase 2 -0.0413024
KDM3A lysine (K)-specific demethylase 3A -0.0411252
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0397735
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0394414
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0390929
VCL vinculin -0.0390839
ZNF292 zinc finger protein 292 -0.0390148
THSD4 thrombospondin, type I, domain containing 4 -0.0390007
PARD3 par-3 family cell polarity regulator -0.0387067
RNF213 ring finger protein 213 -0.0381746
CENPF centromere protein F, 350/400kDa -0.0374404
ADGRG6 adhesion G protein-coupled receptor G6 -0.0373964
ZMYND8 zinc finger, MYND-type containing 8 -0.0373893
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0372741
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0371456
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0351549
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0347231
LPP LIM domain containing preferred translocation partner in lipoma -0.0345572
DIAPH3 diaphanous-related formin 3 -0.0343399
TAS2R14 taste receptor, type 2, member 14 -0.0337951
SRGN serglycin -0.0336857
NEK10 NIMA-related kinase 10 -0.0329938
OGA O-GlcNAcase -0.0329477
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0327924
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.032279
HDAC9 histone deacetylase 9 -0.0321165
TRIO trio Rho guanine nucleotide exchange factor -0.0320172
IFIH1 interferon induced with helicase C domain 1 -0.0319042
SMC4 structural maintenance of chromosomes 4 -0.0317959
CANX calnexin -0.0315903
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0314299
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0312299
RBM39 RNA binding motif protein 39 -0.0306403
APP amyloid beta (A4) precursor protein -0.0303918
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0302885
NF1 neurofibromin 1 -0.0296487
CDK6 cyclin-dependent kinase 6 -0.0295023
DENND1A DENN/MADD domain containing 1A -0.02931
RBM25 RNA binding motif protein 25 -0.0291256
H1-0 H1.0 linker histone -0.0290386
LARS1 leucyl-tRNA synthetase 1 -0.0290066
YBX1 Y box binding protein 1 -0.0289111
SMAD3 SMAD family member 3 -0.0286869
SPIDR scaffolding protein involved in DNA repair -0.0285985
SP100 SP100 nuclear antigen -0.0284187
COL5A2 collagen, type V, alpha 2 -0.0283999
TTC28 tetratricopeptide repeat domain 28 -0.0282065
PSD3 pleckstrin and Sec7 domain containing 3 -0.0278139
BRWD1 bromodomain and WD repeat domain containing 1 -0.0277524
SEPTIN7 septin 7 -0.0276325
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0274773
RSRC1 arginine/serine-rich coiled-coil 1 -0.027264
TRA2A transformer 2 alpha homolog (Drosophila) -0.0271723
XPO1 exportin 1 -0.0269119
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0269031
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0267874
STAG2 stromal antigen 2 -0.0264302
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0262553
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0261965
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0260153
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0258898
BABAM2 BRISC and BRCA1 A complex member 2 -0.0256768
MATR3 matrin 3 -0.0255219
ECE1 endothelin converting enzyme 1 -0.0252253
ANKRD11 ankyrin repeat domain 11 -0.0250268
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.02502
ECT2 epithelial cell transforming 2 -0.0249011
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0246698
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0246199
ANLN anillin, actin binding protein -0.0245557