OTS514_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description OTS514 perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the OTS514_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF1G eukaryotic translation elongation factor 1 gamma 0.105853
EGFR epidermal growth factor receptor 0.0681455
HDAC9 histone deacetylase 9 0.0636935
PKM pyruvate kinase, muscle 0.0615308
PDGFC platelet derived growth factor C 0.0555831
SLC38A2 solute carrier family 38, member 2 0.0513381
EML4 echinoderm microtubule associated protein like 4 0.0479828
ANKRD17 ankyrin repeat domain 17 0.0450226
TSC22D1 TSC22 domain family, member 1 0.0443967
NCEH1 neutral cholesterol ester hydrolase 1 0.0406745
CCNL1 cyclin L1 0.0397739
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0366156
SSBP2 single-stranded DNA binding protein 2 0.0363941
TACC2 transforming, acidic coiled-coil containing protein 2 0.034457
WAC WW domain containing adaptor with coiled-coil 0.0306004
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0300428
APLP2 amyloid beta (A4) precursor-like protein 2 0.0299599
EEF2 eukaryotic translation elongation factor 2 0.0293053
TMEM65 transmembrane protein 65 0.0283475
SRRM2 serine/arginine repetitive matrix 2 0.0282617
PDE4D phosphodiesterase 4D, cAMP-specific 0.0279888
NCKAP1 NCK-associated protein 1 0.0273661
RPL23 ribosomal protein L23 0.0256948
TSC22D2 TSC22 domain family, member 2 0.0243496
ZNF644 zinc finger protein 644 0.0243016
CDC73 cell division cycle 73 0.0241969
WNK1 WNK lysine deficient protein kinase 1 0.0237826
ARID1A AT rich interactive domain 1A (SWI-like) 0.0237244
POTEF POTE ankyrin domain family, member F 0.0235709
JMJD1C jumonji domain containing 1C 0.0234695
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0233434
ZZZ3 zinc finger, ZZ-type containing 3 0.0232722
N4BP2L2 NEDD4 binding protein 2-like 2 0.0231638
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0227735
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0224883
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0211758
RPL9 ribosomal protein L9 0.0211097
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.0207839
MAST2 microtubule associated serine/threonine kinase 2 0.0202614
SLC39A9 solute carrier family 39, member 9 0.0196812
FXR1 fragile X mental retardation, autosomal homolog 1 0.0196777
CREBBP CREB binding protein 0.0193625
PDLIM5 PDZ and LIM domain 5 0.0186374
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0186019
PUM1 pumilio RNA-binding family member 1 0.0185959
ADAM9 ADAM metallopeptidase domain 9 0.0185378
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.018494
IGF2 insulin-like growth factor 2 0.0183653
KDM6A lysine (K)-specific demethylase 6A 0.0183237
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0182882
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0181837
TIAM2 T-cell lymphoma invasion and metastasis 2 0.0181296
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0180353
SON SON DNA binding protein 0.0179982
FAT1 FAT atypical cadherin 1 0.0179748
ZFAND3 zinc finger, AN1-type domain 3 0.0177845
CLTC clathrin, heavy chain (Hc) 0.0177396
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0176877
UBAP2 ubiquitin associated protein 2 0.0176552
BRD2 bromodomain containing 2 0.0176208
ZNF207 zinc finger protein 207 0.0176129
FNDC3B fibronectin type III domain containing 3B 0.0174693
FAM193A family with sequence similarity 193, member A 0.0173493
INO80 INO80 complex subunit 0.0173424
LENG8 leukocyte receptor cluster (LRC) member 8 0.0172424
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0172012
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0171494
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0169351
VMP1 vacuole membrane protein 1 0.0167543
KMT2E lysine (K)-specific methyltransferase 2E 0.0167002
SFPQ splicing factor proline/glutamine-rich 0.0164362
MLIP muscular LMNA-interacting protein 0.0163911
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0163194
TENT2 terminal nucleotidyltransferase 2 0.0161073
PFN1 profilin 1 0.0160998
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H 0.0160988
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 0.0158863
ZMYM4 zinc finger, MYM-type 4 0.0158845
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 0.0157732
RBM33 RNA binding motif protein 33 0.0157356
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0156786
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0156065
KMT2C lysine (K)-specific methyltransferase 2C 0.015519
FNIP1 folliculin interacting protein 1 0.0154931
MBD5 methyl-CpG binding domain protein 5 0.0154829
NRIP1 nuclear receptor interacting protein 1 0.0154521
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0153209
PTGES2 prostaglandin E synthase 2 0.0152846
EXT1 exostosin glycosyltransferase 1 0.0152461
LYST lysosomal trafficking regulator 0.0152147
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial 0.0151991
ARL15 ADP-ribosylation factor-like 15 0.0151893
SGMS2 sphingomyelin synthase 2 0.0151013
CREB5 cAMP responsive element binding protein 5 0.0150754
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0149318
EGR1 early growth response 1 0.0148943
BMPR1A bone morphogenetic protein receptor, type IA 0.0147036
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0146816
AGO3 argonaute RISC catalytic component 3 0.0146602
USP24 ubiquitin specific peptidase 24 0.0145691

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.397004
TMSB4X thymosin beta 4, X-linked -0.205544
AHNAK AHNAK nucleoprotein -0.143462
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0963282
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0928553
VCL vinculin -0.0907272
BMP10 bone morphogenetic protein 10 -0.0867459
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0799033
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0765241
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0711307
EZR ezrin -0.065906
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0644944
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0642098
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0611637
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0594438
ADAM10 ADAM metallopeptidase domain 10 -0.0578868
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0564146
RPS8 ribosomal protein S8 -0.0546881
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0535589
TXNRD1 thioredoxin reductase 1 -0.0531228
FLNB filamin B, beta -0.0529676
S100A6 S100 calcium binding protein A6 -0.0526376
KPNB1 karyopherin (importin) beta 1 -0.0495511
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0495275
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0480677
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0470589
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0462733
CCND1 cyclin D1 -0.0460271
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0459527
ARL4C ADP-ribosylation factor-like 4C -0.0435274
NAP1L1 nucleosome assembly protein 1-like 1 -0.0433021
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0427692
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0417514
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0413319
TPM4 tropomyosin 4 -0.0412482
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0412398
SQSTM1 sequestosome 1 -0.0412243
TPT1 tumor protein, translationally-controlled 1 -0.0400568
SET SET nuclear proto-oncogene -0.0392388
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.039045
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0387886
RPL37A ribosomal protein L37a -0.0384107
NFIA nuclear factor I/A -0.0381582
MKI67 marker of proliferation Ki-67 -0.0377651
MXI1 MAX interactor 1, dimerization protein -0.0374087
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0369591
KDM3A lysine (K)-specific demethylase 3A -0.0365747
MATR3 matrin 3 -0.0364102
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.0361623
DLG1 discs, large homolog 1 (Drosophila) -0.0358802
SMC3 structural maintenance of chromosomes 3 -0.0356165
RPL12 ribosomal protein L12 -0.034927
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.03482
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0345032
RPS12 ribosomal protein S12 -0.0343561
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0342923
RRBP1 ribosome binding protein 1 -0.0339688
RSL1D1 ribosomal L1 domain containing 1 -0.033869
RPS24 ribosomal protein S24 -0.0338502
MYL12B myosin, light chain 12B, regulatory -0.0331463
MAP4 microtubule-associated protein 4 -0.0331394
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0330613
RPLP1 ribosomal protein, large, P1 -0.0327172
EFNA5 ephrin-A5 -0.0323989
LARS1 leucyl-tRNA synthetase 1 -0.0323454
S100A10 S100 calcium binding protein A10 -0.0321778
RPL31 ribosomal protein L31 -0.0321542
RPL34 ribosomal protein L34 -0.0318365
LOC112694756 uncharaterized LOC112694756 -0.0317388
PYGB phosphorylase, glycogen; brain -0.0316239
CANX calnexin -0.0315545
NBEA neurobeachin -0.0312204
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0305381
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0303297
GNAS GNAS complex locus -0.0302008
RPL26 ribosomal protein L26 -0.0301128
EIF4A2 eukaryotic translation initiation factor 4A2 -0.030101
RPLP0 ribosomal protein, large, P0 -0.0299177
RPS3 ribosomal protein S3 -0.0299151
FOXP1 forkhead box P1 -0.0298765
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0298617
WSB1 WD repeat and SOCS box containing 1 -0.0295785
DUSP6 dual specificity phosphatase 6 -0.0291454
CAMTA1 calmodulin binding transcription activator 1 -0.0286622
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0284964
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0283721
ENO1 enolase 1, (alpha) -0.0280101
HDLBP high density lipoprotein binding protein -0.027993
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0279517
NPAS2 neuronal PAS domain protein 2 -0.0279492
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0276647
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0274695
DUSP4 dual specificity phosphatase 4 -0.0274042
MYO5C myosin VC -0.0273168
EBNA1BP2 EBNA1 binding protein 2 -0.0270669
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0270047
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0269544
TAOK1 TAO kinase 1 -0.0267081
CENPF centromere protein F, 350/400kDa -0.0265678
NEBL nebulette -0.0265344