OTS514_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description OTS514 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the OTS514_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF1G eukaryotic translation elongation factor 1 gamma 0.138221
EEF2 eukaryotic translation elongation factor 2 0.123604
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.113402
TRIO trio Rho guanine nucleotide exchange factor 0.112906
CD44 CD44 molecule (Indian blood group) 0.110427
SOD2 superoxide dismutase 2, mitochondrial 0.104317
MYH9 myosin, heavy chain 9, non-muscle 0.103652
NAV2 neuron navigator 2 0.0869462
PGK1 phosphoglycerate kinase 1 0.0816182
NDRG1 N-myc downstream regulated 1 0.0734261
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0707355
SFTPA2 surfactant protein A2 0.0689239
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0687991
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0670174
NAMPT nicotinamide phosphoribosyltransferase 0.0668726
MT2A metallothionein 2A 0.064264
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0630028
FTH1 ferritin, heavy polypeptide 1 0.062749
FLNB filamin B, beta 0.0566999
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0564722
CCNL1 cyclin L1 0.0563035
TGFBI transforming growth factor, beta-induced, 68kDa 0.0542645
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0537363
ADM adrenomedullin 0.0515019
LDHA lactate dehydrogenase A 0.0496786
HDAC9 histone deacetylase 9 0.0490801
ZMIZ1 zinc finger, MIZ-type containing 1 0.0480087
CDH13 cadherin 13 0.0478234
FNIP1 folliculin interacting protein 1 0.0453536
LOXL2 lysyl oxidase-like 2 0.0441948
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0436012
COL5A1 collagen, type V, alpha 1 0.0432962
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0427456
KYNU kynureninase 0.0418778
BACE2 beta-site APP-cleaving enzyme 2 0.0410157
UGCG UDP-glucose ceramide glucosyltransferase 0.0405005
MYOF myoferlin 0.0398444
FLNA filamin A, alpha 0.0397119
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0395759
STC1 stanniocalcin 1 0.0394823
ARRDC3 arrestin domain containing 3 0.0378741
EGFR epidermal growth factor receptor 0.0378514
SLC38A2 solute carrier family 38, member 2 0.0377367
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0369705
FMNL2 formin-like 2 0.0369681
PRELID2 PRELI domain containing 2 0.0365582
PPARD peroxisome proliferator-activated receptor delta 0.0356387
TMEM132D transmembrane protein 132D 0.0355038
RND3 Rho family GTPase 3 0.035427
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0351518
FNDC3B fibronectin type III domain containing 3B 0.0350522
DOCK5 dedicator of cytokinesis 5 0.0350216
CALR calreticulin 0.0348979
HMGA2 high mobility group AT-hook 2 0.0336424
ELL2 elongation factor, RNA polymerase II, 2 0.0327264
YEATS2 YEATS domain containing 2 0.0324993
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.031841
TRIM25 tripartite motif containing 25 0.0317764
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0316874
MMP12 matrix metallopeptidase 12 0.0313066
SEPTIN9 septin 9 0.0310188
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.030944
SNX9 sorting nexin 9 0.0305112
MT1X metallothionein 1X 0.0304905
MACF1 microtubule-actin crosslinking factor 1 0.029597
ZBTB38 zinc finger and BTB domain containing 38 0.0290112
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0284481
VAC14 Vac14 homolog (S. cerevisiae) 0.0280797
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0279945
UBAP2 ubiquitin associated protein 2 0.0278761
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.027847
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0276954
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0276537
FOXO3 forkhead box O3 0.027398
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0272172
GDF15 growth differentiation factor 15 0.0270497
CADM1 cell adhesion molecule 1 0.0267702
RUNX1 runt-related transcription factor 1 0.0267355
TNS3 tensin 3 0.0267325
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.026696
IARS1 isoleucyl-tRNA synthetase 1 0.0266163
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0265877
CDK19 cyclin-dependent kinase 19 0.0263927
STC2 stanniocalcin 2 0.0261163
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0261086
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.026023
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0254693
ZNF638 zinc finger protein 638 0.0253937
ZHX2 zinc fingers and homeoboxes 2 0.0252051
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0251612
NT5C2 5'-nucleotidase, cytosolic II 0.0251355
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0250662
NONO non-POU domain containing, octamer-binding 0.025063
AFF3 AF4/FMR2 family, member 3 0.024709
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0246633
LOX lysyl oxidase 0.024663
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0246512
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0245027
MBNL2 muscleblind-like splicing regulator 2 0.0244636
COL6A3 collagen, type VI, alpha 3 0.0243794

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.222215
FRMD4A FERM domain containing 4A -0.14077
FTL ferritin, light polypeptide -0.114302
TMSB10 thymosin beta 10 -0.111855
VCL vinculin -0.10774
FN1 fibronectin 1 -0.0944103
EGR1 early growth response 1 -0.0935895
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0725579
IER3 immediate early response 3 -0.063865
PTMA prothymosin, alpha -0.0581804
BICC1 BicC family RNA binding protein 1 -0.0571329
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0553882
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0549811
IGFBP3 insulin-like growth factor binding protein 3 -0.0535842
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0472582
CENPF centromere protein F, 350/400kDa -0.0454086
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0438048
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0420534
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0393422
TXNRD1 thioredoxin reductase 1 -0.0384687
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0382193
VCAN versican -0.0379551
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0379203
AHNAK AHNAK nucleoprotein -0.03786
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0372701
TMSB4X thymosin beta 4, X-linked -0.0369193
MKI67 marker of proliferation Ki-67 -0.036586
TPM4 tropomyosin 4 -0.03646
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0338982
PALLD palladin, cytoskeletal associated protein -0.0331544
ANLN anillin, actin binding protein -0.0328306
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0327036
HLA-B major histocompatibility complex, class I, B -0.0320273
GLIS3 GLIS family zinc finger 3 -0.031788
CALD1 caldesmon 1 -0.0312784
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0309694
RPS8 ribosomal protein S8 -0.0307206
YBX1 Y box binding protein 1 -0.030478
IFITM3 interferon induced transmembrane protein 3 -0.0302259
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0302251
RAI14 retinoic acid induced 14 -0.0302124
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0291725
NCOA7 nuclear receptor coactivator 7 -0.0291691
TPM1 tropomyosin 1 (alpha) -0.0288704
EXT1 exostosin glycosyltransferase 1 -0.0276324
KRT19 keratin 19, type I -0.0271847
QKI QKI, KH domain containing, RNA binding -0.0271087
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0270164
DIAPH2 diaphanous-related formin 2 -0.0269073
ZMYND8 zinc finger, MYND-type containing 8 -0.0268854
EIF1 eukaryotic translation initiation factor 1 -0.0264399
ANXA2 annexin A2 -0.0263492
S100A9 S100 calcium binding protein A9 -0.0263085
RPS27A ribosomal protein S27a -0.0262158
KIF4A kinesin family member 4A -0.0256714
B2M beta-2-microglobulin -0.0253962
RPL32 ribosomal protein L32 -0.0253781
RPS24 ribosomal protein S24 -0.0252929
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0252555
RPL19 ribosomal protein L19 -0.0251938
NAV1 neuron navigator 1 -0.0251439
ENO1 enolase 1, (alpha) -0.0250626
FRMD5 FERM domain containing 5 -0.024837
SMC4 structural maintenance of chromosomes 4 -0.0245226
SFRP1 secreted frizzled-related protein 1 -0.0242677
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0241955
THBS1 thrombospondin 1 -0.0239322
SBF2 SET binding factor 2 -0.0239015
KPNB1 karyopherin (importin) beta 1 -0.0238391
EZR ezrin -0.0235147
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0234883
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0229905
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0229103
SLC38A1 solute carrier family 38, member 1 -0.0221817
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0221794
CTSD cathepsin D -0.0221242
RRBP1 ribosome binding protein 1 -0.021914
CKAP5 cytoskeleton associated protein 5 -0.0215606
DIAPH3 diaphanous-related formin 3 -0.0213677
PLIN2 perilipin 2 -0.0213066
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0212475
RIGI RNA sensor RIG-I -0.0209828
PRR11 proline rich 11 -0.0207
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0204414
IER2 immediate early response 2 -0.0203945
RPL31 ribosomal protein L31 -0.0202195
RPL36A ribosomal protein L36a -0.0198567
TNNC1 troponin C type 1 (slow) -0.019725
COL1A2 collagen, type I, alpha 2 -0.019462
RPLP2 ribosomal protein, large, P2 -0.0193996
RPS12 ribosomal protein S12 -0.019286
RPLP1 ribosomal protein, large, P1 -0.019222
GOLGB1 golgin B1 -0.0192097
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0191729
RPS19 ribosomal protein S19 -0.019118
IGFBP7 insulin-like growth factor binding protein 7 -0.0191178
DST dystonin -0.0190713
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0189694
COL1A1 collagen, type I, alpha 1 -0.0189304
RPL26 ribosomal protein L26 -0.0189153