OTS514_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description OTS514 perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the OTS514_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.139939
TGFBI transforming growth factor, beta-induced, 68kDa 0.139642
FAM13A family with sequence similarity 13, member A 0.0770212
NDRG1 N-myc downstream regulated 1 0.0763291
ARRDC3 arrestin domain containing 3 0.0737744
ELL2 elongation factor, RNA polymerase II, 2 0.0680835
ADM adrenomedullin 0.0619854
KMT2E lysine (K)-specific methyltransferase 2E 0.0604524
NAMPT nicotinamide phosphoribosyltransferase 0.0604175
CADM1 cell adhesion molecule 1 0.0574495
AKAP9 A kinase (PRKA) anchor protein 9 0.0475569
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0472469
PKM pyruvate kinase, muscle 0.0466343
MARCHF6 membrane associated ring-CH-type finger 6 0.0465071
SETD5 SET domain containing 5 0.0459069
ANKRD11 ankyrin repeat domain 11 0.0447803
BACE2 beta-site APP-cleaving enzyme 2 0.0429634
MT1X metallothionein 1X 0.0415667
RNF145 ring finger protein 145 0.0396134
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 0.0388905
ESYT2 extended synaptotagmin-like protein 2 0.0387004
ZNF292 zinc finger protein 292 0.0380866
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0374113
H3-3B H3.3 histone B 0.0365871
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0357096
RAB1A RAB1A, member RAS oncogene family 0.0344572
UBE2H ubiquitin-conjugating enzyme E2H 0.0342378
SDC4 syndecan 4 0.0341659
MYH9 myosin, heavy chain 9, non-muscle 0.0331758
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0326711
ZNF207 zinc finger protein 207 0.0318796
UGCG UDP-glucose ceramide glucosyltransferase 0.0315651
TTC3 tetratricopeptide repeat domain 3 0.0314119
EEF1G eukaryotic translation elongation factor 1 gamma 0.0312025
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0307116
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0307065
RARS1 arginyl-tRNA synthetase 1 0.0304197
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0292296
RBM39 RNA binding motif protein 39 0.0292244
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0289093
ARB2A ARB2 cotranscriptional regulator A 0.0282154
HPCAL1 hippocalcin-like 1 0.0281006
C1D C1D nuclear receptor corepressor 0.0277378
LOC112694756 uncharaterized LOC112694756 0.0276859
ZCCHC7 zinc finger, CCHC domain containing 7 0.0273064
RPS6 ribosomal protein S6 0.0270719
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0267099
SEPTIN9 septin 9 0.0266766
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0265576
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0265025
MANBA mannosidase, beta A, lysosomal 0.0264877
ACTN1 actinin, alpha 1 0.0263847
ELP2 elongator acetyltransferase complex subunit 2 0.026375
WSB1 WD repeat and SOCS box containing 1 0.025968
S100A9 S100 calcium binding protein A9 0.025928
GPBP1 GC-rich promoter binding protein 1 0.0259099
ZNF395 zinc finger protein 395 0.0254345
SHB Src homology 2 domain containing adaptor protein B 0.0253293
EEF2 eukaryotic translation elongation factor 2 0.0250211
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0247475
RLF rearranged L-myc fusion 0.0243804
SKIC3 SKI3 subunit of superkiller complex 0.0243795
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0242897
SNX13 sorting nexin 13 0.0242614
XPO1 exportin 1 0.0239637
EXOC1 exocyst complex component 1 0.0237544
BHLHE40 basic helix-loop-helix family, member e40 0.0237429
VEGFA vascular endothelial growth factor A 0.0237365
KCTD9 potassium channel tetramerization domain containing 9 0.0234401
COPB1 coatomer protein complex, subunit beta 1 0.0233941
AVL9 AVL9 homolog (S. cerevisiase) 0.0233291
AKAP13 A kinase (PRKA) anchor protein 13 0.0232709
GOLGA4 golgin A4 0.0232347
CTNND1 catenin (cadherin-associated protein), delta 1 0.0229796
CSDE1 cold shock domain containing E1, RNA-binding 0.0228995
SYNPO synaptopodin 0.0227989
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0225574
AFF4 AF4/FMR2 family, member 4 0.022278
SRRM2 serine/arginine repetitive matrix 2 0.0222304
CDK7 cyclin-dependent kinase 7 0.0221955
CLIP2 CAP-GLY domain containing linker protein 2 0.0221363
PMM2 phosphomannomutase 2 0.0221337
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0219785
ACBD3 acyl-CoA binding domain containing 3 0.0218024
DSTN destrin (actin depolymerizing factor) 0.0217275
EPAS1 endothelial PAS domain protein 1 0.0215399
DPYSL2 dihydropyrimidinase-like 2 0.0214708
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0211879
TNPO3 transportin 3 0.0207589
RPL36 ribosomal protein L36 0.0206509
POM121C POM121 transmembrane nucleoporin C 0.0205784
XPO6 exportin 6 0.0204492
RPL23 ribosomal protein L23 0.0203836
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 0.0203498
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.0202909
CALR calreticulin 0.0202104
SEC24B SEC24 family member B 0.0201514
COPA coatomer protein complex, subunit alpha 0.0200642
USP33 ubiquitin specific peptidase 33 0.0200626
CELF1 CUGBP, Elav-like family member 1 0.0198978

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.257456
FN1 fibronectin 1 -0.188272
CXCL8 chemokine (C-X-C motif) ligand 8 -0.162183
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.12856
CDH13 cadherin 13 -0.11687
VIM vimentin -0.115711
PRSS23 protease, serine, 23 -0.0954847
COL6A3 collagen, type VI, alpha 3 -0.0945644
NAV1 neuron navigator 1 -0.0794622
VCL vinculin -0.0765206
F3 coagulation factor III (thromboplastin, tissue factor) -0.0706893
TRIO trio Rho guanine nucleotide exchange factor -0.0703035
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0681364
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0679472
DPYD dihydropyrimidine dehydrogenase -0.0644914
COL1A2 collagen, type I, alpha 2 -0.064137
ASPH aspartate beta-hydroxylase -0.0618427
LOX lysyl oxidase -0.060726
AHNAK AHNAK nucleoprotein -0.0606512
STC1 stanniocalcin 1 -0.0579665
CD44 CD44 molecule (Indian blood group) -0.0560302
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0558813
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0558734
COL1A1 collagen, type I, alpha 1 -0.0535708
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0527318
RAI14 retinoic acid induced 14 -0.0526108
ACTG1 actin gamma 1 -0.0505446
MACF1 microtubule-actin crosslinking factor 1 -0.0488732
EXT1 exostosin glycosyltransferase 1 -0.0488534
COL5A1 collagen, type V, alpha 1 -0.0461428
AKAP12 A kinase (PRKA) anchor protein 12 -0.0447553
ENO1 enolase 1, (alpha) -0.0436528
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0434736
TMSB10 thymosin beta 10 -0.041024
DST dystonin -0.040296
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0394681
GLIS3 GLIS family zinc finger 3 -0.0380441
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0376035
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0374736
PSD3 pleckstrin and Sec7 domain containing 3 -0.0373489
UTRN utrophin -0.0371653
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0369966
TPM4 tropomyosin 4 -0.0366206
RASAL2 RAS protein activator like 2 -0.0361302
CALU calumenin -0.0358344
MAP1B microtubule-associated protein 1B -0.0356144
KYNU kynureninase -0.0350664
HLA-C major histocompatibility complex, class I, C -0.034898
MAP4 microtubule-associated protein 4 -0.0338886
ZMYND8 zinc finger, MYND-type containing 8 -0.033833
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0334026
PDIA4 protein disulfide isomerase family A, member 4 -0.0333
ZBTB20 zinc finger and BTB domain containing 20 -0.0327757
VEGFC vascular endothelial growth factor C -0.0316743
BIRC6 baculoviral IAP repeat containing 6 -0.0313761
PDIA3 protein disulfide isomerase family A, member 3 -0.0313633
HMGA2 high mobility group AT-hook 2 -0.0310939
TNS3 tensin 3 -0.0307236
LAMB3 laminin, beta 3 -0.0306315
HDLBP high density lipoprotein binding protein -0.0303202
SOD2 superoxide dismutase 2, mitochondrial -0.0302955
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) -0.0298816
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.029862
RRBP1 ribosome binding protein 1 -0.0297153
MBD5 methyl-CpG binding domain protein 5 -0.0296454
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0285985
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0284282
PTMA prothymosin, alpha -0.0282233
PTPRK protein tyrosine phosphatase, receptor type, K -0.0273209
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0270441
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0269867
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0269313
MXI1 MAX interactor 1, dimerization protein -0.0266952
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0262363
OXR1 oxidation resistance 1 -0.0261114
PCYOX1 prenylcysteine oxidase 1 -0.0259339
NABP1 nucleic acid binding protein 1 -0.0256769
TMSB4X thymosin beta 4, X-linked -0.0254835
PDIA6 protein disulfide isomerase family A, member 6 -0.0254155
FER fer (fps/fes related) tyrosine kinase -0.0253322
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0253013
CALD1 caldesmon 1 -0.0252724
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0251414
ARHGAP24 Rho GTPase activating protein 24 -0.0248422
AFF3 AF4/FMR2 family, member 3 -0.0248421
ATG7 autophagy related 7 -0.02481
GCC2 GRIP and coiled-coil domain containing 2 -0.0247442
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0243983
MBNL1 muscleblind-like splicing regulator 1 -0.0241544
MKI67 marker of proliferation Ki-67 -0.0241196
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase -0.023836
SERINC3 serine incorporator 3 -0.0235038
TAS2R14 taste receptor, type 2, member 14 -0.0234549
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0233949
TUBA1B tubulin, alpha 1b -0.0233488
TPM1 tropomyosin 1 (alpha) -0.0232237
FBN1 fibrillin 1 -0.0225087
ATXN1 ataxin 1 -0.0225077
DNAH11 dynein, axonemal, heavy chain 11 -0.0225006
ZFAND3 zinc finger, AN1-type domain 3 -0.0222661