Omeprazole (sodium)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Omeprazole (sodium) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Omeprazole (sodium)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
APOB apolipoprotein B 0.0694236
NKD1 naked cuticle homolog 1 (Drosophila) 0.0470182
SVIL supervillin 0.0426232
IGFBP1 insulin-like growth factor binding protein 1 0.0360284
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0342154
VCL vinculin 0.0337386
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0319014
SDC4 syndecan 4 0.0316255
MRTFA myocardin related transcription factor A 0.0307288
NRIP1 nuclear receptor interacting protein 1 0.0268414
MYH9 myosin, heavy chain 9, non-muscle 0.0265993
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0246664
BCL2L1 BCL2-like 1 0.0243986
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.024147
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0234081
PUM2 pumilio RNA-binding family member 2 0.0233951
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0221481
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0220313
ITGB5 integrin, beta 5 0.0220013
SMAD3 SMAD family member 3 0.0217246
FAT1 FAT atypical cadherin 1 0.0215067
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0203463
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0198244
SKI SKI proto-oncogene 0.0195081
FOXO1 forkhead box O1 0.0194766
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0192822
INTS6 integrator complex subunit 6 0.0189994
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 0.018947
LCOR ligand dependent nuclear receptor corepressor 0.0186309
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0184167
KIAA1217 KIAA1217 0.0183539
ACTN4 actinin, alpha 4 0.0182701
CTNND1 catenin (cadherin-associated protein), delta 1 0.0182463
RIGI RNA sensor RIG-I 0.0182415
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0178718
FNIP1 folliculin interacting protein 1 0.0178003
PDLIM5 PDZ and LIM domain 5 0.0175873
FOXP1 forkhead box P1 0.0173368
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0172911
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.017224
KRT8 keratin 8, type II 0.0171677
ANKRD17 ankyrin repeat domain 17 0.0165379
DNAH17 dynein, axonemal, heavy chain 17 0.016537
PPARD peroxisome proliferator-activated receptor delta 0.0163443
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0162627
ANKRD11 ankyrin repeat domain 11 0.0162132
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0160679
MAN1A2 mannosidase, alpha, class 1A, member 2 0.0158528
JAG1 jagged 1 0.015803
CUL3 cullin 3 0.0157885
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 0.0157067
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0156367
PTP4A1 protein tyrosine phosphatase type IVA, member 1 0.0156075
EXT1 exostosin glycosyltransferase 1 0.0155979
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0155203
TIMP2 TIMP metallopeptidase inhibitor 2 0.0154691
FERMT2 fermitin family member 2 0.0154307
HNMT histamine N-methyltransferase 0.0151442
NPAS2 neuronal PAS domain protein 2 0.0151201
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0149821
YAP1 Yes-associated protein 1 0.0146812
PTCHD4 patched domain containing 4 0.0146008
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0144678
STK24 serine/threonine kinase 24 0.0144616
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.0142968
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0142883
DTNA dystrobrevin, alpha 0.0142322
CFB complement factor B 0.0141648
UBAP1 ubiquitin associated protein 1 0.0140295
PUM1 pumilio RNA-binding family member 1 0.013975
RAB7A RAB7A, member RAS oncogene family 0.0138896
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0137535
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0135976
ATP13A3 ATPase type 13A3 0.0135682
GRB10 growth factor receptor-bound protein 10 0.0134461
ABTB3 ankyrin repeat and BTB domain containing 3 0.0132446
TBC1D22A TBC1 domain family, member 22A 0.0131273
RPL4 ribosomal protein L4 0.0130829
ZBTB10 zinc finger and BTB domain containing 10 0.0129775
NCKAP1 NCK-associated protein 1 0.0127544
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.012685
SPRED2 sprouty-related, EVH1 domain containing 2 0.012647
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0125571
ADARB1 adenosine deaminase, RNA-specific, B1 0.0125013
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.012437
RCOR1 REST corepressor 1 0.0124309
BHLHE40 basic helix-loop-helix family, member e40 0.0122516
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0122018
SRSF4 serine/arginine-rich splicing factor 4 0.0120354
MYO1E myosin IE 0.012
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.0119188
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.011823
MYO1D myosin ID 0.0118052
NT5C2 5'-nucleotidase, cytosolic II 0.0116941
ICAM1 intercellular adhesion molecule 1 0.0116736
PICALM phosphatidylinositol binding clathrin assembly protein 0.0116556
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.0116366
SP3 Sp3 transcription factor 0.0115999
ZEB1 zinc finger E-box binding homeobox 1 0.0115839
FN1 fibronectin 1 0.0115837

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.203342
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.104889
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0991419
MT2A metallothionein 2A -0.0783661
AHSG alpha-2-HS-glycoprotein -0.0770389
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0729035
APOA2 apolipoprotein A-II -0.0664989
RPS6 ribosomal protein S6 -0.0606979
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0579954
AKAP12 A kinase (PRKA) anchor protein 12 -0.0540072
ENO1 enolase 1, (alpha) -0.0533151
FBF1 Fas (TNFRSF6) binding factor 1 -0.0531398
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0511073
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0507279
EHBP1 EH domain binding protein 1 -0.0501828
C3 complement component 3 -0.0489583
EML4 echinoderm microtubule associated protein like 4 -0.0464781
CPE carboxypeptidase E -0.0441796
GPC3 glypican 3 -0.0428351
PLIN2 perilipin 2 -0.0422464
ITGA1 integrin, alpha 1 -0.0421486
CP ceruloplasmin (ferroxidase) -0.0416998
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0415639
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0384765
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0376502
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0374508
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0369129
LDHA lactate dehydrogenase A -0.0365055
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0362811
FTL ferritin, light polypeptide -0.0357658
PDGFB platelet-derived growth factor beta polypeptide -0.035405
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0349074
PERP PERP, TP53 apoptosis effector -0.0340182
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0335529
TMEM123 transmembrane protein 123 -0.033381
SLC38A2 solute carrier family 38, member 2 -0.0332235
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0320536
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0316074
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0314694
PCBP2 poly(rC) binding protein 2 -0.0313669
LYZ lysozyme -0.031187
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0306785
KTN1 kinectin 1 (kinesin receptor) -0.0301966
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0298781
TRIM26 tripartite motif containing 26 -0.0288481
TM4SF1 transmembrane 4 L six family member 1 -0.0287911
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0284381
DSPP dentin sialophosphoprotein -0.0275531
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0274958
ADGRG6 adhesion G protein-coupled receptor G6 -0.0274409
NDRG1 N-myc downstream regulated 1 -0.0273532
SLC38A1 solute carrier family 38, member 1 -0.0268596
SESTD1 SEC14 and spectrin domains 1 -0.0267198
APOA1 apolipoprotein A-I -0.0257946
RPS8 ribosomal protein S8 -0.0257239
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0255811
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0252938
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0252399
PTPRM protein tyrosine phosphatase, receptor type, M -0.0251843
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.024715
RPS12 ribosomal protein S12 -0.0245279
SOS1 son of sevenless homolog 1 (Drosophila) -0.0242758
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0242542
APOH apolipoprotein H (beta-2-glycoprotein I) -0.0242489
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0237765
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0236505
PDIA3 protein disulfide isomerase family A, member 3 -0.0231781
TF transferrin -0.0230422
DENND4A DENN/MADD domain containing 4A -0.0230165
RERE arginine-glutamic acid dipeptide (RE) repeats -0.023004
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0229101
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0225026
VDAC1 voltage-dependent anion channel 1 -0.0222642
ARHGAP12 Rho GTPase activating protein 12 -0.0221584
MBNL2 muscleblind-like splicing regulator 2 -0.0216517
PEG3 paternally expressed 3 -0.0213203
NPR2 natriuretic peptide receptor 2 -0.0212788
RPLP0 ribosomal protein, large, P0 -0.0210642
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0208664
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.0208188
RPL12 ribosomal protein L12 -0.020313
TPM4 tropomyosin 4 -0.0202816
HMGA1 high mobility group AT-hook 1 -0.0202427
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0201416
INSIG2 insulin induced gene 2 -0.0201295
DOK6 docking protein 6 -0.0200416
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.020002
RB1CC1 RB1-inducible coiled-coil 1 -0.0195168
STK17A serine/threonine kinase 17a -0.0194383
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0194325
UGP2 UDP-glucose pyrophosphorylase 2 -0.0194137
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0193649
CYB5R3 cytochrome b5 reductase 3 -0.0190705
CLMN calmin (calponin-like, transmembrane) -0.019052
IFITM3 interferon induced transmembrane protein 3 -0.0190384
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0187095
PEG10 paternally expressed 10 -0.018699
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0186033
MAML2 mastermind-like 2 (Drosophila) -0.0185549
DUSP6 dual specificity phosphatase 6 -0.018488