Omeprazole_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Omeprazole perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Omeprazole_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 0.0957134
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0783062
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0611391
VIM vimentin 0.0508781
COL5A2 collagen, type V, alpha 2 0.0484814
CADM2 cell adhesion molecule 2 0.043279
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0410978
PCLO piccolo presynaptic cytomatrix protein 0.0380023
GPC3 glypican 3 0.035417
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0345068
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0335123
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.0321299
ADGRL2 adhesion G protein-coupled receptor L2 0.0317165
PCDH9 protocadherin 9 0.030231
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0295364
PTMA prothymosin, alpha 0.0291091
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.0282007
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0276721
HDAC9 histone deacetylase 9 0.0267822
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0260466
NPAS3 neuronal PAS domain protein 3 0.0248135
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0246085
DST dystonin 0.0241999
TRPS1 trichorhinophalangeal syndrome I 0.0241084
TRIO trio Rho guanine nucleotide exchange factor 0.0232499
ITGAV integrin, alpha V 0.0226649
TENM3 teneurin transmembrane protein 3 0.0218097
FNDC3B fibronectin type III domain containing 3B 0.0217825
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0216883
ADGRV1 adhesion G protein-coupled receptor V1 0.0212347
PEG10 paternally expressed 10 0.0208212
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0206794
THBS1 thrombospondin 1 0.0205787
ZEB2 zinc finger E-box binding homeobox 2 0.0203145
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0195122
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.019434
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0193886
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 0.0191066
ZNF292 zinc finger protein 292 0.019104
ADGRL3 adhesion G protein-coupled receptor L3 0.0190398
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0189998
LRRC4C leucine rich repeat containing 4C 0.0189767
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0182223
PLPP1 phospholipid phosphatase 1 0.0179525
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0177581
SMYD3 SET and MYND domain containing 3 0.0176471
SLIT2 slit homolog 2 (Drosophila) 0.0174722
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0173649
NCAM2 neural cell adhesion molecule 2 0.01735
MACF1 microtubule-actin crosslinking factor 1 0.017225
COL3A1 collagen, type III, alpha 1 0.0171324
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0171195
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0169223
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0169109
CSMD3 CUB and Sushi multiple domains 3 0.0166204
ANKRD12 ankyrin repeat domain 12 0.0165967
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0161408
TNRC6B trinucleotide repeat containing 6B 0.0157048
UTRN utrophin 0.0156523
IGF1R insulin-like growth factor 1 receptor 0.0155327
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0151637
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0150774
SNX6 sorting nexin 6 0.0149173
ANKRD33B ankyrin repeat domain 33B 0.0148844
SYT1 synaptotagmin I 0.0148341
NEBL nebulette 0.0146005
SPAG9 sperm associated antigen 9 0.0145586
TMSB10 thymosin beta 10 0.0145075
ZFAND3 zinc finger, AN1-type domain 3 0.0142918
MYO10 myosin X 0.0141955
TENM2 teneurin transmembrane protein 2 0.014068
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0140255
DOCK5 dedicator of cytokinesis 5 0.0138457
MAML2 mastermind-like 2 (Drosophila) 0.0137766
PHF3 PHD finger protein 3 0.0137263
ZNF385D zinc finger protein 385D 0.0136947
SRP54 signal recognition particle 54kDa 0.0136168
COL1A2 collagen, type I, alpha 2 0.0135027
SBF2 SET binding factor 2 0.0134773
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0133967
MEIS2 Meis homeobox 2 0.0131887
RAD51B RAD51 paralog B 0.0131845
PDE4D phosphodiesterase 4D, cAMP-specific 0.0131415
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0131284
TTC28 tetratricopeptide repeat domain 28 0.013009
KIF5B kinesin family member 5B 0.0127781
RAB2A RAB2A, member RAS oncogene family 0.0127593
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0126962
PRELID2 PRELI domain containing 2 0.012687
PCDH7 protocadherin 7 0.0125683
SET SET nuclear proto-oncogene 0.0125646
RAI1 retinoic acid induced 1 0.012435
CSDE1 cold shock domain containing E1, RNA-binding 0.0124265
MAP4 microtubule-associated protein 4 0.0123671
AKAP9 A kinase (PRKA) anchor protein 9 0.0123659
PCBP2 poly(rC) binding protein 2 0.012212
STRN3 striatin, calmodulin binding protein 3 0.0121347
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0121306
SRPK2 SRSF protein kinase 2 0.0121261
METAP2 methionyl aminopeptidase 2 0.0120911

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0179317
ATP5F1B ATP synthase F1 subunit beta -0.0103137
POTEF POTE ankyrin domain family, member F -0.00956489
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.00924388
ELF2 E74-like factor 2 (ets domain transcription factor) -0.00791716
RPLP1 ribosomal protein, large, P1 -0.00773027
ATP6V0C ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c -0.00765467
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.00725198
RPL39 ribosomal protein L39 -0.0068544
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.00631454
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.00611611
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.00611606
KDM5B lysine (K)-specific demethylase 5B -0.0059255
RPS20 ribosomal protein S20 -0.0058942
PER1 period circadian clock 1 -0.00581354
MDK midkine (neurite growth-promoting factor 2) -0.00576884
RPS15 ribosomal protein S15 -0.00562435
ADGRG6 adhesion G protein-coupled receptor G6 -0.00547766
CKAP2 cytoskeleton associated protein 2 -0.00542859
CYB5R3 cytochrome b5 reductase 3 -0.00538614
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.00537645
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) -0.00536227
ZFP36 ZFP36 ring finger protein -0.00497903
TSC22D2 TSC22 domain family, member 2 -0.00497311
ASTN2 astrotactin 2 -0.00494539
RPL35 ribosomal protein L35 -0.00489205
RPS5 ribosomal protein S5 -0.00488995
H1-10 H1.10 linker histone -0.00485732
YBX1 Y box binding protein 1 -0.00482158
RNASEH2A ribonuclease H2, subunit A -0.00470506
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme -0.00468566
SNX3 sorting nexin 3 -0.00465219
CDC20 cell division cycle 20 -0.00461838
ACTN4 actinin, alpha 4 -0.00457452
RPL32 ribosomal protein L32 -0.00446822
BTG3 BTG family, member 3 -0.00446815
RBM3 RNA binding motif (RNP1, RRM) protein 3 -0.00446697
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 -0.0043241
GPX1 glutathione peroxidase 1 -0.00431077
RNF149 ring finger protein 149 -0.0043044
MRE11 MRE11 homolog, double strand break repair nuclease -0.00429832
MKI67 marker of proliferation Ki-67 -0.00421095
RIGI RNA sensor RIG-I -0.0041822
RNPS1 RNA binding protein S1, serine-rich domain -0.00418185
BRPF3 bromodomain and PHD finger containing, 3 -0.00417941
PLP2 proteolipid protein 2 (colonic epithelium-enriched) -0.00413764
RPL34 ribosomal protein L34 -0.00412242
H2BC5 H2B clustered histone 5 -0.0041194
GABARAP GABA(A) receptor-associated protein -0.00411785
HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 -0.0041025
DROSHA drosha, ribonuclease type III -0.00408114
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans) -0.00408097
NGFR nerve growth factor receptor -0.00408013
EIF3D eukaryotic translation initiation factor 3, subunit D -0.004071
TCERG1 transcription elongation regulator 1 -0.00406425
UBB ubiquitin B -0.00405539
TUBB2A tubulin, beta 2A class IIa -0.00400614
ZFP36L1 ZFP36 ring finger protein-like 1 -0.00397458
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0039698
DKC1 dyskeratosis congenita 1, dyskerin -0.00396439
PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2 -0.00395255
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like -0.00394363
ACTN1 actinin, alpha 1 -0.00392769
ZNF106 zinc finger protein 106 -0.00391312
GPN3 GPN-loop GTPase 3 -0.00388498
KIF21A kinesin family member 21A -0.00386691
COX5A cytochrome c oxidase subunit Va -0.00386584
ASXL2 additional sex combs like transcriptional regulator 2 -0.00386571
QPRT quinolinate phosphoribosyltransferase -0.00384894
KLHL24 kelch-like family member 24 -0.00383329
OSR2 odd-skipped related transciption factor 2 -0.00381587
PHB2 prohibitin 2 -0.00380986
TARS1 threonyl-tRNA synthetase 1 -0.00380983
VBP1 von Hippel-Lindau binding protein 1 -0.00380234
CDK17 cyclin-dependent kinase 17 -0.00379922
RPLP0 ribosomal protein, large, P0 -0.00379554
MFGE8 milk fat globule-EGF factor 8 protein -0.00378096
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.00375944
MARCKS myristoylated alanine-rich protein kinase C substrate -0.00375488
RPL38 ribosomal protein L38 -0.00371258
FSCN1 fascin actin-bundling protein 1 -0.00369622
CFAP20 cilia and flagella associated protein 20 -0.00368022
NELFA negative elongation factor complex member A -0.00367015
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase -0.00363039
GADD45B growth arrest and DNA-damage-inducible, beta -0.00362406
SVIL supervillin -0.00362043
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.00361313
PELP1 proline, glutamate and leucine rich protein 1 -0.00360203
CKB creatine kinase, brain -0.00359769
COQ10B coenzyme Q10 homolog B (S. cerevisiae) -0.003596
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like -0.0035955
TMEM230 transmembrane protein 230 -0.00359536
PTBP1 polypyrimidine tract binding protein 1 -0.00358376
AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 -0.00357925
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 -0.00357774
PIGT phosphatidylinositol glycan anchor biosynthesis, class T -0.00347904
MRPS24 mitochondrial ribosomal protein S24 -0.00346718
HDIP1 HDAC and MIER1 interacting protein 1 -0.0034602
NHEJ1 nonhomologous end-joining factor 1 -0.0034535
LDLRAD4 low density lipoprotein receptor class A domain containing 4 -0.00344814