Omeprazole_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Omeprazole perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Omeprazole_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.242388
IGFBP3 insulin-like growth factor binding protein 3 0.21622
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.119777
FN1 fibronectin 1 0.11176
F3 coagulation factor III (thromboplastin, tissue factor) 0.0738902
VIM vimentin 0.0666086
B2M beta-2-microglobulin 0.06338
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0609912
PDIA3 protein disulfide isomerase family A, member 3 0.0593307
ERRFI1 ERBB receptor feedback inhibitor 1 0.0584135
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0580827
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.057379
STC1 stanniocalcin 1 0.0559815
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0557477
MYH9 myosin, heavy chain 9, non-muscle 0.0543374
TIMP3 TIMP metallopeptidase inhibitor 3 0.0527781
CALR calreticulin 0.0523739
ANXA2 annexin A2 0.0514216
MAP1B microtubule-associated protein 1B 0.0507196
ARRDC3 arrestin domain containing 3 0.0492906
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0486759
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0480669
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0466608
CXCL8 chemokine (C-X-C motif) ligand 8 0.0457879
ANXA5 annexin A5 0.0443674
NDRG1 N-myc downstream regulated 1 0.0440434
CD44 CD44 molecule (Indian blood group) 0.0436165
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0426847
FNDC3B fibronectin type III domain containing 3B 0.0420704
VEGFA vascular endothelial growth factor A 0.0419752
ELL2 elongation factor, RNA polymerase II, 2 0.0418573
CALU calumenin 0.0404206
LOXL2 lysyl oxidase-like 2 0.0396132
ENO1 enolase 1, (alpha) 0.039473
COL5A1 collagen, type V, alpha 1 0.0389547
PDIA6 protein disulfide isomerase family A, member 6 0.0372204
SEC31A SEC31 homolog A (S. cerevisiae) 0.0370139
TRA2A transformer 2 alpha homolog (Drosophila) 0.0357577
VEGFC vascular endothelial growth factor C 0.0352889
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.03465
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0343169
TENT5A terminal nucleotidyltransferase 5A 0.0342625
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0341386
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0336687
PDIA4 protein disulfide isomerase family A, member 4 0.0336024
NRXN3 neurexin 3 0.0331431
LDHA lactate dehydrogenase A 0.0328414
PRSS23 protease, serine, 23 0.0326686
GOLGA4 golgin A4 0.032588
PRKCA protein kinase C, alpha 0.0319402
LOX lysyl oxidase 0.0318848
AKAP9 A kinase (PRKA) anchor protein 9 0.0315347
NAMPT nicotinamide phosphoribosyltransferase 0.031142
CANX calnexin 0.0303904
TMEM158 transmembrane protein 158 (gene/pseudogene) 0.0300951
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0299854
HOOK2 hook microtubule-tethering protein 2 0.0295707
TNS3 tensin 3 0.0295453
LMAN1 lectin, mannose-binding, 1 0.0291083
PRELID2 PRELI domain containing 2 0.028167
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0281611
HILPDA hypoxia inducible lipid droplet-associated 0.028117
HDLBP high density lipoprotein binding protein 0.0277469
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.027698
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0274704
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0274087
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0271291
PGK1 phosphoglycerate kinase 1 0.027045
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0268666
UBC ubiquitin C 0.0265771
PKM pyruvate kinase, muscle 0.0265268
ANXA1 annexin A1 0.026388
TRIO trio Rho guanine nucleotide exchange factor 0.026231
EGFR epidermal growth factor receptor 0.0261835
NAV1 neuron navigator 1 0.0257974
HLA-C major histocompatibility complex, class I, C 0.0257859
XPO1 exportin 1 0.0253891
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0253431
CALD1 caldesmon 1 0.0252847
COL7A1 collagen, type VII, alpha 1 0.0250166
FMNL2 formin-like 2 0.0248624
PTGES2 prostaglandin E synthase 2 0.0244901
ADM adrenomedullin 0.0242067
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0241716
TGFBI transforming growth factor, beta-induced, 68kDa 0.0238945
ZSWIM6 zinc finger, SWIM-type containing 6 0.0238778
ZNF395 zinc finger protein 395 0.0237556
SEPTIN9 septin 9 0.0237375
VCL vinculin 0.0232727
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.0230239
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0226687
CLTC clathrin, heavy chain (Hc) 0.0226218
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0224344
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.022384
NBAS neuroblastoma amplified sequence 0.0223794
SND1 staphylococcal nuclease and tudor domain containing 1 0.0223072
PSD3 pleckstrin and Sec7 domain containing 3 0.0221571
TNIP1 TNFAIP3 interacting protein 1 0.0218762
RRBP1 ribosome binding protein 1 0.021787
ANKRD17 ankyrin repeat domain 17 0.0217041

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.0543292
PTMA prothymosin, alpha -0.0276181
TPT1 tumor protein, translationally-controlled 1 -0.0261103
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0245589
RPL37A ribosomal protein L37a -0.0244271
RPS3 ribosomal protein S3 -0.02229
RPS17 ribosomal protein S17 -0.0222094
RPL19 ribosomal protein L19 -0.0218223
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.021397
RPL34 ribosomal protein L34 -0.0202292
S100A6 S100 calcium binding protein A6 -0.0194136
RPS5 ribosomal protein S5 -0.0169582
RACK1 receptor for activated C kinase 1 -0.0166874
LOC102724023 ES1 protein homolog, mitochondrial -0.0162625
RPS13 ribosomal protein S13 -0.016208
RPL26 ribosomal protein L26 -0.0160008
RPS25 ribosomal protein S25 -0.0159976
RPS12 ribosomal protein S12 -0.0159714
RPL5 ribosomal protein L5 -0.0155408
NKD1 naked cuticle homolog 1 (Drosophila) -0.0154273
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0147045
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0145575
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0142967
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0142843
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0141315
CTR9 CTR9, Paf1/RNA polymerase II complex component -0.0141175
GNAS GNAS complex locus -0.0138089
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0137926
GMDS GDP-mannose 4,6-dehydratase -0.013597
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.013483
ADGRL2 adhesion G protein-coupled receptor L2 -0.013465
ZC3H15 zinc finger CCCH-type containing 15 -0.0132743
RPLP2 ribosomal protein, large, P2 -0.0132516
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0130991
CLU clusterin -0.0130563
IER3 immediate early response 3 -0.0129697
TAS2R14 taste receptor, type 2, member 14 -0.0129478
KBTBD2 kelch repeat and BTB (POZ) domain containing 2 -0.0129095
ZC3H13 zinc finger CCCH-type containing 13 -0.0128692
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -0.0127702
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0126762
RFX7 regulatory factor X, 7 -0.0126339
NRG1 neuregulin 1 -0.0125966
HPCAL1 hippocalcin-like 1 -0.0124567
EGR1 early growth response 1 -0.0124391
SIK3 SIK family kinase 3 -0.0124148
NALF1 NALCN channel auxiliary factor 1 -0.0123158
RPS29 ribosomal protein S29 -0.0122261
RPL23 ribosomal protein L23 -0.0122253
LIMCH1 LIM and calponin homology domains 1 -0.0122016
RPS15 ribosomal protein S15 -0.012191
OLA1 Obg-like ATPase 1 -0.0121803
IRS2 insulin receptor substrate 2 -0.0121516
RPL27A ribosomal protein L27a -0.0121384
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -0.0121333
RPL35A ribosomal protein L35a -0.0120421
WTAP Wilms tumor 1 associated protein -0.0119888
PPP4R3A protein phosphatase 4 regulatory subunit 3A -0.0119266
TMEM263 transmembrane protein 263 -0.0119126
GALK2 galactokinase 2 -0.0118376
LCOR ligand dependent nuclear receptor corepressor -0.0117984
RPS10 ribosomal protein S10 -0.0117562
SLMAP sarcolemma associated protein -0.0117541
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0116707
FRMD5 FERM domain containing 5 -0.0116616
RPL7A ribosomal protein L7a -0.0115871
RPS27A ribosomal protein S27a -0.0115422
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0115374
EEF1G eukaryotic translation elongation factor 1 gamma -0.0115297
UVRAG UV radiation resistance associated -0.0115109
SMG7 SMG7 nonsense mediated mRNA decay factor -0.0115002
EXOC1 exocyst complex component 1 -0.0114776
PNISR PNN-interacting serine/arginine-rich protein -0.0112879
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.011196
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) -0.0111856
SEC61B Sec61 beta subunit -0.0110711
FAM168A family with sequence similarity 168, member A -0.0110433
PDE10A phosphodiesterase 10A -0.0110376
FLNB filamin B, beta -0.0110143
ZNF652 zinc finger protein 652 -0.0110081
BCL3 B-cell CLL/lymphoma 3 -0.0109885
C2ORF42 chromosome 2 open reading frame 42 -0.0109806
RPL37 ribosomal protein L37 -0.0109777
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0108693
GPX4 glutathione peroxidase 4 -0.010821
UBE2R2 ubiquitin-conjugating enzyme E2R 2 -0.0108071
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0107625
RPL8 ribosomal protein L8 -0.0106846
RPL10A ribosomal protein L10a -0.0106738
INTS6L integrator complex subunit 6 like -0.0106718
TIPRL TOR signaling pathway regulator -0.0106349
FYN FYN proto-oncogene, Src family tyrosine kinase -0.0106168
ATXN3 ataxin 3 -0.0105969
BTN3A3 butyrophilin, subfamily 3, member A3 -0.0105757
TENT4B terminal nucleotidyltransferase 4B -0.0105724
CTSC cathepsin C -0.010532
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0105247
KRT8 keratin 8, type II -0.0104918
ZFHX3 zinc finger homeobox 3 -0.01042
RBM6 RNA binding motif protein 6 -0.0104055