Oxaliplatin_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Oxaliplatin perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Oxaliplatin_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.16162
NLGN1 neuroligin 1 0.131735
YAP1 Yes-associated protein 1 0.12319
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.112934
RRM2 ribonucleotide reductase M2 0.112293
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.112223
HMGA2 high mobility group AT-hook 2 0.110359
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.105957
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.104344
PCDH7 protocadherin 7 0.103869
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0970108
DST dystonin 0.0939294
HSPA8 heat shock 70kDa protein 8 0.0797309
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0706434
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0691841
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.068432
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0663651
TMSB10 thymosin beta 10 0.0658222
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0610486
LDHA lactate dehydrogenase A 0.0591484
WWOX WW domain containing oxidoreductase 0.0577846
BIRC3 baculoviral IAP repeat containing 3 0.057073
INTS6 integrator complex subunit 6 0.0570218
SMC4 structural maintenance of chromosomes 4 0.0541354
FTL ferritin, light polypeptide 0.0536672
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0514396
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0513817
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0512551
CMIP c-Maf inducing protein 0.0506827
CELF2 CUGBP, Elav-like family member 2 0.0500588
TENM3 teneurin transmembrane protein 3 0.0499794
ASPH aspartate beta-hydroxylase 0.0499279
CALR calreticulin 0.0491956
LOC112694756 uncharaterized LOC112694756 0.0481433
CCN2 cellular communication network factor 2 0.0472359
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0469151
CPNE1 copine I 0.0464884
AREG amphiregulin 0.0462891
CLTC clathrin, heavy chain (Hc) 0.0460745
ADIPOR2 adiponectin receptor 2 0.0459437
TRIO trio Rho guanine nucleotide exchange factor 0.0456889
FUS FUS RNA binding protein 0.0456416
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0448544
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0445271
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0441554
ADGRG6 adhesion G protein-coupled receptor G6 0.043566
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0435169
DENND5A DENN/MADD domain containing 5A 0.043372
ATP11A ATPase, class VI, type 11A 0.043342
LPP LIM domain containing preferred translocation partner in lipoma 0.0432259
LRMDA leucine rich melanocyte differentiation associated 0.042606
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0422691
MACF1 microtubule-actin crosslinking factor 1 0.0421013
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0416456
NONO non-POU domain containing, octamer-binding 0.0415907
EEF2 eukaryotic translation elongation factor 2 0.0415865
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0409354
WNK1 WNK lysine deficient protein kinase 1 0.0405975
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0404288
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.040333
DOCK1 dedicator of cytokinesis 1 0.0398695
MKI67 marker of proliferation Ki-67 0.0397568
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.039665
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0396461
ZSWIM6 zinc finger, SWIM-type containing 6 0.0391237
TPI1 triosephosphate isomerase 1 0.0387473
ZFAND3 zinc finger, AN1-type domain 3 0.0386898
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0383835
USP9X ubiquitin specific peptidase 9, X-linked 0.0378879
EIF4A2 eukaryotic translation initiation factor 4A2 0.0378529
MYH9 myosin, heavy chain 9, non-muscle 0.03736
ERRFI1 ERBB receptor feedback inhibitor 1 0.0369424
STIP1 stress-induced phosphoprotein 1 0.0362358
NUMA1 nuclear mitotic apparatus protein 1 0.0360494
FLNA filamin A, alpha 0.0359065
PRIM2 primase, DNA, polypeptide 2 (58kDa) 0.0358902
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0355388
EXOC4 exocyst complex component 4 0.0352126
TPT1 tumor protein, translationally-controlled 1 0.0351823
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0349251
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0348694
MARCHF4 membrane associated ring-CH-type finger 4 0.0344866
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.0343932
PDGFC platelet derived growth factor C 0.0336729
CANX calnexin 0.0336037
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0332521
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0330827
HELLS helicase, lymphoid-specific 0.0330047
PRKCE protein kinase C, epsilon 0.0329889
SRRM2 serine/arginine repetitive matrix 2 0.03296
MED13L mediator complex subunit 13-like 0.0323196
TEAD4 TEA domain family member 4 0.0321639
RPS19 ribosomal protein S19 0.0320325
RPL31 ribosomal protein L31 0.0319066
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0318226
CCSER1 coiled-coil serine-rich protein 1 0.031739
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0309595
ETV6 ets variant 6 0.0309353
TRAPPC9 trafficking protein particle complex 9 0.0308808
RAD51B RAD51 paralog B 0.0306446

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.101349
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0652944
HMGA1 high mobility group AT-hook 1 -0.0381216
EHBP1 EH domain binding protein 1 -0.0369865
PTMS parathymosin -0.0352258
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0334808
DPYD dihydropyrimidine dehydrogenase -0.0258161
ZBTB20 zinc finger and BTB domain containing 20 -0.0235337
RBM25 RNA binding motif protein 25 -0.0218491
KLHL24 kelch-like family member 24 -0.021371
CLDN1 claudin 1 -0.02095
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 -0.0207559
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.020423
MMP12 matrix metallopeptidase 12 -0.0200647
ANKRD12 ankyrin repeat domain 12 -0.0198783
BCHE butyrylcholinesterase -0.0198489
CARD16 caspase recruitment domain family, member 16 -0.0197855
VIM vimentin -0.0197178
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0195287
SLC38A2 solute carrier family 38, member 2 -0.019016
WDR43 WD repeat domain 43 -0.018806
HSPB1 heat shock 27kDa protein 1 -0.018646
TSPAN5 tetraspanin 5 -0.018645
GARS1 glycyl-tRNA synthetase 1 -0.0185901
ZFR zinc finger RNA binding protein -0.0183131
WASF2 WAS protein family, member 2 -0.01829
LARP1 La ribonucleoprotein domain family, member 1 -0.018114
SBF2 SET binding factor 2 -0.01724
FBXO11 F-box protein 11 -0.0170349
STRN3 striatin, calmodulin binding protein 3 -0.0168421
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0167602
UGCG UDP-glucose ceramide glucosyltransferase -0.0163934
ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 -0.0163876
RSL1D1 ribosomal L1 domain containing 1 -0.0161814
TMEM123 transmembrane protein 123 -0.0160767
IFIH1 interferon induced with helicase C domain 1 -0.015956
PATJ PATJ crumbs cell polarity complex component -0.0158345
ARHGAP12 Rho GTPase activating protein 12 -0.0157353
S100A6 S100 calcium binding protein A6 -0.0157304
THOC2 THO complex 2 -0.0156906
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha -0.0156358
FBXL2 F-box and leucine-rich repeat protein 2 -0.0156132
PRR11 proline rich 11 -0.0153769
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0151425
JMJD1C jumonji domain containing 1C -0.0148852
RAD23A RAD23 homolog A (S. cerevisiae) -0.0148206
NABP1 nucleic acid binding protein 1 -0.0146131
NIPSNAP2 nipsnap homolog 2 -0.0145451
FBXL20 F-box and leucine-rich repeat protein 20 -0.0145163
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0143641
TSC22D2 TSC22 domain family, member 2 -0.0143582
CCNL1 cyclin L1 -0.0143512
RPS2 ribosomal protein S2 -0.0141678
RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1 -0.0141092
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0140477
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0140073
NUP58 nucleoporin 58 -0.0138957
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0136778
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0136709
MGAT4C MGAT4 family, member C -0.0136609
U2SURP U2 snRNP-associated SURP domain containing -0.0136265
PREPL prolyl endopeptidase-like -0.0136091
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0134276
ZDHHC17 zinc finger, DHHC-type containing 17 -0.0133994
PTMA prothymosin, alpha -0.0132171
PRKCI protein kinase C, iota -0.0131319
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.0130833
DTNA dystrobrevin, alpha -0.012922
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.012773
ADAM9 ADAM metallopeptidase domain 9 -0.0126286
RBMS2 RNA binding motif, single stranded interacting protein 2 -0.0126209
SESN2 sestrin 2 -0.0126156
ARL5B ADP-ribosylation factor-like 5B -0.0126075
LMO7 LIM domain 7 -0.012578
SLC38A1 solute carrier family 38, member 1 -0.0125499
S100A10 S100 calcium binding protein A10 -0.0124804
CSNK1A1 casein kinase 1, alpha 1 -0.0123481
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0122091
LOC102724023 ES1 protein homolog, mitochondrial -0.0121484
MAP4 microtubule-associated protein 4 -0.0120934
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0120347
RPL8 ribosomal protein L8 -0.0120054
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0119583
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0119284
MARCHF7 membrane associated ring-CH-type finger 7 -0.011844
MYADM myeloid-associated differentiation marker -0.0118064
GGNBP2 gametogenetin binding protein 2 -0.0116377
FNBP4 formin binding protein 4 -0.0116291
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.011554
CCNI cyclin I -0.0114278
MTREX Mtr4 exosome RNA helicase -0.0113037
FOXK2 forkhead box K2 -0.0111615
KIF18B kinesin family member 18B -0.0111247
PUM2 pumilio RNA-binding family member 2 -0.0111166
BIRC6 baculoviral IAP repeat containing 6 -0.0110579
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0110186
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0109891
WDR75 WD repeat domain 75 -0.0109186
LARS1 leucyl-tRNA synthetase 1 -0.0108462
ZNF652 zinc finger protein 652 -0.0107828