Oxaliplatin_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Oxaliplatin perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Oxaliplatin_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KRT17 keratin 17, type I 0.156613
EGFR epidermal growth factor receptor 0.124429
DSCAM Down syndrome cell adhesion molecule 0.121598
IGF1R insulin-like growth factor 1 receptor 0.114078
EEF2 eukaryotic translation elongation factor 2 0.109875
MYO5B myosin VB 0.107993
MYO1E myosin IE 0.107218
BACE2 beta-site APP-cleaving enzyme 2 0.106081
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.105475
LMO7 LIM domain 7 0.104708
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0995793
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0957553
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0936162
KYNU kynureninase 0.0926633
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0887285
AKAP9 A kinase (PRKA) anchor protein 9 0.0816851
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.081537
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0808482
MUC16 mucin 16, cell surface associated 0.0761069
TXNRD1 thioredoxin reductase 1 0.0760782
ANXA2 annexin A2 0.0752858
SPAG9 sperm associated antigen 9 0.0739839
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0729797
MCL1 myeloid cell leukemia 1 0.0727476
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0711841
RSAD2 radical S-adenosyl methionine domain containing 2 0.0694241
LDHA lactate dehydrogenase A 0.0678428
SMOC1 SPARC related modular calcium binding 1 0.0659681
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0656548
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0654841
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0648666
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0646776
ATXN1 ataxin 1 0.0644944
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0642747
RPL31 ribosomal protein L31 0.0632223
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.062703
DOCK4 dedicator of cytokinesis 4 0.0615162
SRRM2 serine/arginine repetitive matrix 2 0.0614608
AKAP13 A kinase (PRKA) anchor protein 13 0.0610175
LAMC2 laminin, gamma 2 0.060999
EIF1 eukaryotic translation initiation factor 1 0.0605298
OASL 2'-5'-oligoadenylate synthetase-like 0.0603368
GRB10 growth factor receptor-bound protein 10 0.0592954
CLIP1 CAP-GLY domain containing linker protein 1 0.058286
FAT1 FAT atypical cadherin 1 0.0581968
EZR ezrin 0.0572044
PDE4D phosphodiesterase 4D, cAMP-specific 0.0563775
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0562863
MSN moesin 0.05494
FOXO3 forkhead box O3 0.0532899
TNIP1 TNFAIP3 interacting protein 1 0.0532841
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0516261
KDM6A lysine (K)-specific demethylase 6A 0.0514196
NKD1 naked cuticle homolog 1 (Drosophila) 0.0513775
RPL23 ribosomal protein L23 0.0503537
HSPA8 heat shock 70kDa protein 8 0.0494988
CMIP c-Maf inducing protein 0.0487874
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0485167
BPTF bromodomain PHD finger transcription factor 0.0473545
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0465653
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0464969
NIPBL Nipped-B homolog (Drosophila) 0.0463067
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0463038
CAMTA1 calmodulin binding transcription activator 1 0.046216
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0456755
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0447639
AFF4 AF4/FMR2 family, member 4 0.0447579
GSK3B glycogen synthase kinase 3 beta 0.044657
ABHD3 abhydrolase domain containing 3 0.0431237
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0430442
IFIH1 interferon induced with helicase C domain 1 0.0427045
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0426182
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0424267
NCOA3 nuclear receptor coactivator 3 0.0423708
MPRIP myosin phosphatase Rho interacting protein 0.0418439
NCOR2 nuclear receptor corepressor 2 0.041812
USP9X ubiquitin specific peptidase 9, X-linked 0.0415909
RPL35A ribosomal protein L35a 0.0411469
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.0408673
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.040845
FMNL2 formin-like 2 0.0407888
BRD4 bromodomain containing 4 0.0406844
FGF13 fibroblast growth factor 13 0.0401225
RPL15 ribosomal protein L15 0.0400212
FRMD4A FERM domain containing 4A 0.0399661
RPS13 ribosomal protein S13 0.0399502
GPBP1 GC-rich promoter binding protein 1 0.0397704
VEGFA vascular endothelial growth factor A 0.039762
LAMB3 laminin, beta 3 0.0395306
TJP1 tight junction protein 1 0.0390888
SET SET nuclear proto-oncogene 0.0390685
DSTN destrin (actin depolymerizing factor) 0.0378994
ANKRD17 ankyrin repeat domain 17 0.0374037
CFLAR CASP8 and FADD-like apoptosis regulator 0.0370777
USP53 ubiquitin specific peptidase 53 0.03697
SIK3 SIK family kinase 3 0.0369404
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0362994
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K 0.0359537
RPS25 ribosomal protein S25 0.035895
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0355829

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.119037
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.107106
FNDC3B fibronectin type III domain containing 3B -0.104595
NALF1 NALCN channel auxiliary factor 1 -0.0991519
ADGRB3 adhesion G protein-coupled receptor B3 -0.0966287
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0964156
VIM vimentin -0.0878327
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0870367
CD44 CD44 molecule (Indian blood group) -0.083879
MMP1 matrix metallopeptidase 1 -0.0808525
MT2A metallothionein 2A -0.0806252
NDRG1 N-myc downstream regulated 1 -0.0797386
EXT1 exostosin glycosyltransferase 1 -0.0752147
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.074623
LOXL2 lysyl oxidase-like 2 -0.0733731
METTL15 methyltransferase like 15 -0.072959
TM4SF1 transmembrane 4 L six family member 1 -0.0720681
OGA O-GlcNAcase -0.0698773
PRKCA protein kinase C, alpha -0.0696631
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0696582
AK1 adenylate kinase 1 -0.0657488
ABI3BP ABI family, member 3 (NESH) binding protein -0.0635242
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0628973
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0626099
MAN2A1 mannosidase, alpha, class 2A, member 1 -0.0622438
BAIAP2L1 BAI1-associated protein 2-like 1 -0.061835
MAP4 microtubule-associated protein 4 -0.0617053
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0603791
TAS2R14 taste receptor, type 2, member 14 -0.0580853
ESYT2 extended synaptotagmin-like protein 2 -0.0580512
RASA2 RAS p21 protein activator 2 -0.0575719
PDIA3 protein disulfide isomerase family A, member 3 -0.0572078
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0572074
ASPH aspartate beta-hydroxylase -0.0571706
SEPTIN10 septin 10 -0.0571287
CEMIP cell migration inducing protein, hyaluronan binding -0.0568854
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0563947
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0562601
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0560406
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0558258
GLS2 glutaminase 2 (liver, mitochondrial) -0.0557022
JMJD1C jumonji domain containing 1C -0.055684
KLF6 Kruppel-like factor 6 -0.0553104
STAU1 staufen double-stranded RNA binding protein 1 -0.0537813
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1 -0.0536507
FTL ferritin, light polypeptide -0.0536293
NAP1L1 nucleosome assembly protein 1-like 1 -0.0536255
RAB7A RAB7A, member RAS oncogene family -0.0533109
HPCAL1 hippocalcin-like 1 -0.0529914
ZNF638 zinc finger protein 638 -0.0526225
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0524107
RPS19 ribosomal protein S19 -0.0523073
SEC31A SEC31 homolog A (S. cerevisiae) -0.0522054
COL6A3 collagen, type VI, alpha 3 -0.0506327
FRMD5 FERM domain containing 5 -0.0505451
SHB Src homology 2 domain containing adaptor protein B -0.0503613
MBNL1 muscleblind-like splicing regulator 1 -0.0497793
RORA RAR-related orphan receptor A -0.049415
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0493749
ZMYND8 zinc finger, MYND-type containing 8 -0.0485349
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0484753
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0481703
FLNB filamin B, beta -0.0474607
FER fer (fps/fes related) tyrosine kinase -0.0466251
GLIS3 GLIS family zinc finger 3 -0.046292
APP amyloid beta (A4) precursor protein -0.0459094
CA12 carbonic anhydrase XII -0.0456247
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0452334
KMT2A lysine (K)-specific methyltransferase 2A -0.0447684
C1D C1D nuclear receptor corepressor -0.0444773
GNAS GNAS complex locus -0.0440434
TMEM165 transmembrane protein 165 -0.0437689
TBC1D22A TBC1 domain family, member 22A -0.0432051
ATP13A3 ATPase type 13A3 -0.0428012
PKM pyruvate kinase, muscle -0.0427825
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.042485
ZBTB20 zinc finger and BTB domain containing 20 -0.0422707
FAM13A family with sequence similarity 13, member A -0.0420606
CDK17 cyclin-dependent kinase 17 -0.0420596
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0419818
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0418971
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0417978
RBM47 RNA binding motif protein 47 -0.0413883
MAML2 mastermind-like 2 (Drosophila) -0.0411521
ARHGAP26 Rho GTPase activating protein 26 -0.0411285
ARHGAP12 Rho GTPase activating protein 12 -0.0411176
TENT5A terminal nucleotidyltransferase 5A -0.0410301
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0409937
RSF1 remodeling and spacing factor 1 -0.0406837
NF1 neurofibromin 1 -0.0406047
EHBP1 EH domain binding protein 1 -0.0399984
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0397762
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0396595
RPS11 ribosomal protein S11 -0.0392748
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0390437
UBE2H ubiquitin-conjugating enzyme E2H -0.0386785
SQSTM1 sequestosome 1 -0.038472
RTN4 reticulon 4 -0.0382838
ZFC3H1 zinc finger, C3H1-type containing -0.0382614
SMYD3 SET and MYND domain containing 3 -0.0377523