Oxaliplatin_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Oxaliplatin perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Oxaliplatin_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ACTG1 actin gamma 1 0.182153
MYH9 myosin, heavy chain 9, non-muscle 0.149597
SAMD4A sterile alpha motif domain containing 4A 0.126485
PLEC plectin 0.113366
NDRG1 N-myc downstream regulated 1 0.0903774
EEF2 eukaryotic translation elongation factor 2 0.0818023
TRIO trio Rho guanine nucleotide exchange factor 0.0791303
LAMC2 laminin, gamma 2 0.0759257
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0711733
EXT1 exostosin glycosyltransferase 1 0.0708698
LOC112694756 uncharaterized LOC112694756 0.0689567
TMSB4X thymosin beta 4, X-linked 0.0684122
RPL37 ribosomal protein L37 0.0682378
IGFBP3 insulin-like growth factor binding protein 3 0.0680746
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0642787
HLA-B major histocompatibility complex, class I, B 0.0631776
RPL35A ribosomal protein L35a 0.0616076
SMAD3 SMAD family member 3 0.0559854
FTH1 ferritin, heavy polypeptide 1 0.055754
EFNA5 ephrin-A5 0.0549178
DSPP dentin sialophosphoprotein 0.0543798
HSPA8 heat shock 70kDa protein 8 0.0539827
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0532501
EEF1G eukaryotic translation elongation factor 1 gamma 0.0512935
FTL ferritin, light polypeptide 0.051229
RPL23 ribosomal protein L23 0.0485883
NAV2 neuron navigator 2 0.0485721
SDC4 syndecan 4 0.047878
VEGFA vascular endothelial growth factor A 0.0466434
NONO non-POU domain containing, octamer-binding 0.0455261
AHNAK2 AHNAK nucleoprotein 2 0.0447215
KRT8 keratin 8, type II 0.0446514
BHLHE40 basic helix-loop-helix family, member e40 0.0443372
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0417589
RPL3 ribosomal protein L3 0.0415221
MSN moesin 0.0392668
HLA-A major histocompatibility complex, class I, A 0.0388277
APLP2 amyloid beta (A4) precursor-like protein 2 0.0377632
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.037465
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.036315
ISG15 ISG15 ubiquitin-like modifier 0.0362487
MYO5B myosin VB 0.0359733
TNIP1 TNFAIP3 interacting protein 1 0.0355136
LMO7 LIM domain 7 0.035451
LAMB3 laminin, beta 3 0.0353417
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.034839
RPL9 ribosomal protein L9 0.0348202
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.034516
ATXN1 ataxin 1 0.0343438
EGFR epidermal growth factor receptor 0.0342299
LPP LIM domain containing preferred translocation partner in lipoma 0.0340454
FLNA filamin A, alpha 0.033197
FBXO32 F-box protein 32 0.0320692
NUMA1 nuclear mitotic apparatus protein 1 0.0319065
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0309601
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0307546
RNF213 ring finger protein 213 0.0302231
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0301259
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0297963
SON SON DNA binding protein 0.029579
RPL11 ribosomal protein L11 0.0294981
AKAP13 A kinase (PRKA) anchor protein 13 0.0294396
MACF1 microtubule-actin crosslinking factor 1 0.0294181
LIMCH1 LIM and calponin homology domains 1 0.0293957
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0292675
INTS6 integrator complex subunit 6 0.0291741
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0287209
SVIL supervillin 0.0286699
PGBD5 piggyBac transposable element derived 5 0.0285365
MT2A metallothionein 2A 0.0285352
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0281859
DBN1 drebrin 1 0.0274698
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0264487
KRT18 keratin 18, type I 0.0264218
ANO6 anoctamin 6 0.0264154
IFI27 interferon, alpha-inducible protein 27 0.0263781
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 0.0262905
ZSWIM6 zinc finger, SWIM-type containing 6 0.026133
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0255318
RPL13A ribosomal protein L13a 0.0254159
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0251007
LDHA lactate dehydrogenase A 0.0246649
GRB10 growth factor receptor-bound protein 10 0.0242192
RPS27 ribosomal protein S27 0.0241088
IFITM3 interferon induced transmembrane protein 3 0.0239798
ATP11A ATPase, class VI, type 11A 0.0239756
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 0.0238171
BRD2 bromodomain containing 2 0.0236404
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0235137
MX1 MX dynamin-like GTPase 1 0.0234844
RPS17 ribosomal protein S17 0.0234247
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0230412
HDAC9 histone deacetylase 9 0.0229862
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0229781
ARHGAP5 Rho GTPase activating protein 5 0.0228781
DST dystonin 0.022822
GOLGA3 golgin A3 0.0227563
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0226117
SRRM2 serine/arginine repetitive matrix 2 0.0225773
DOCK5 dedicator of cytokinesis 5 0.022522

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.319932
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.137662
PTMA prothymosin, alpha -0.124289
POTEF POTE ankyrin domain family, member F -0.117282
FN1 fibronectin 1 -0.105693
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0961593
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.084637
UBC ubiquitin C -0.0770957
HMGA1 high mobility group AT-hook 1 -0.074565
NAMPT nicotinamide phosphoribosyltransferase -0.0701947
S100A10 S100 calcium binding protein A10 -0.0675928
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0661143
RPL8 ribosomal protein L8 -0.0643733
RPS23 ribosomal protein S23 -0.0639707
TM4SF1 transmembrane 4 L six family member 1 -0.0612596
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.05862
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0583366
TFG TRK-fused gene -0.0581237
KMT2E lysine (K)-specific methyltransferase 2E -0.0575471
GOLGA4 golgin A4 -0.0529326
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0526116
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0497817
NPEPPS aminopeptidase puromycin sensitive -0.0488482
FNDC3B fibronectin type III domain containing 3B -0.0477048
TSC22D2 TSC22 domain family, member 2 -0.0472771
KDM5B lysine (K)-specific demethylase 5B -0.046123
TOP1 topoisomerase (DNA) I -0.0450236
CCND1 cyclin D1 -0.0436945
DEK DEK proto-oncogene -0.0434174
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0430614
ZNF292 zinc finger protein 292 -0.0418214
GARS1 glycyl-tRNA synthetase 1 -0.0408359
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0402538
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0401013
RNF145 ring finger protein 145 -0.039951
MDK midkine (neurite growth-promoting factor 2) -0.0395004
TMEM123 transmembrane protein 123 -0.0393122
GPBP1 GC-rich promoter binding protein 1 -0.038517
GNAS GNAS complex locus -0.0383219
WASF2 WAS protein family, member 2 -0.0380916
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0377403
WAC WW domain containing adaptor with coiled-coil -0.0375164
CCNL1 cyclin L1 -0.0366229
CCNI cyclin I -0.036213
CD2AP CD2-associated protein -0.035688
ADAM9 ADAM metallopeptidase domain 9 -0.0350969
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0347917
RAB1A RAB1A, member RAS oncogene family -0.0344609
USP3 ubiquitin specific peptidase 3 -0.0343184
RLF rearranged L-myc fusion -0.0341943
MARCHF6 membrane associated ring-CH-type finger 6 -0.0340142
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.033528
RBM39 RNA binding motif protein 39 -0.033409
SLMAP sarcolemma associated protein -0.0332119
RBM25 RNA binding motif protein 25 -0.0323911
DSTN destrin (actin depolymerizing factor) -0.032211
FAM13A family with sequence similarity 13, member A -0.0320857
SETD5 SET domain containing 5 -0.0314561
CDC73 cell division cycle 73 -0.0313956
RPL32 ribosomal protein L32 -0.0312658
ZNF207 zinc finger protein 207 -0.0310026
HSPB1 heat shock 27kDa protein 1 -0.0306319
RAB7A RAB7A, member RAS oncogene family -0.0305605
PDIA3 protein disulfide isomerase family A, member 3 -0.0301063
ZFAND3 zinc finger, AN1-type domain 3 -0.0299106
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0298699
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0297381
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0293309
TMEM263 transmembrane protein 263 -0.0291041
CERT1 ceramide transporter 1 -0.0286756
RPS15 ribosomal protein S15 -0.0285981
LMAN1 lectin, mannose-binding, 1 -0.0284046
LY6E lymphocyte antigen 6 complex, locus E -0.0283655
PHLDA2 pleckstrin homology-like domain, family A, member 2 -0.0280164
MEF2A myocyte enhancer factor 2A -0.0278074
MIS18BP1 MIS18 binding protein 1 -0.0276111
RIOK3 RIO kinase 3 -0.0272369
UPP1 uridine phosphorylase 1 -0.0272067
RPS8 ribosomal protein S8 -0.0272032
MAP4 microtubule-associated protein 4 -0.0269559
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0269545
LYN LYN proto-oncogene, Src family tyrosine kinase -0.0265629
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0261524
QKI QKI, KH domain containing, RNA binding -0.0258987
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0254813
PRRC1 proline-rich coiled-coil 1 -0.0254298
HMGB1 high mobility group box 1 -0.0252117
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.025203
KLHL24 kelch-like family member 24 -0.0251003
CDK17 cyclin-dependent kinase 17 -0.0244747
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0243719
CSDE1 cold shock domain containing E1, RNA-binding -0.0242081
SSBP2 single-stranded DNA binding protein 2 -0.0240597
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0239041
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0237884
NOP58 NOP58 ribonucleoprotein -0.0235112
AREG amphiregulin -0.023509
TRA2A transformer 2 alpha homolog (Drosophila) -0.0233207
SPAG9 sperm associated antigen 9 -0.022858
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0226085