P12ICHIKAWA Gene Set

Dataset CCLE Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description Human T cell leukemia; established from the peripheral blood of a 7-year-old boy with acute lymphoblastic leukemia (ALL). (BRENDA Tissue and Enzyme Source Ontology, BTO_0002839)
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Genes

364 genes with high or low copy number in P12ICHIKAWA relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
DUX4L4 double homeobox 4 like 4 3.2803
OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2.88614
MACROD2 MACRO domain containing 2 2.83668
EYS eyes shut homolog (Drosophila) 2.7222
NEFH neurofilament, heavy polypeptide 2.28802
KRTAP5-5 keratin associated protein 5-5 2.1327
MIR4751 microRNA 4751 2.08835
ATF5 activating transcription factor 5 2.08642
FAM131C family with sequence similarity 131, member C 2.02608
CLCNKB chloride channel, voltage-sensitive Kb 2.02597
HSPB7 heat shock 27kDa protein family, member 7 (cardiovascular) 2.02596
CLCNKA chloride channel, voltage-sensitive Ka 2.02576
MED26 mediator complex subunit 26 2.00706
MIR4750 microRNA 4750 1.99879
TBC1D17 TBC1 domain family, member 17 1.99879
AKT1S1 AKT1 substrate 1 (proline-rich) 1.99879
NUP62 nucleoporin 62kDa 1.99692
IL4I1 interleukin 4 induced 1 1.98767
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 1.90965
MIR548AI microRNA 548ai 1.87259
TRIO trio Rho guanine nucleotide exchange factor 1.8037
RERE arginine-glutamic acid dipeptide (RE) repeats 1.79738
FYB FYN binding protein 1.78359
KIR3DL3 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3 1.75303
RRN3P3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 3 1.74917
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) 1.74008
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase) 1.74005
NPIPB5 nuclear pore complex interacting protein family, member B5 1.72389
SMG1P1 SMG1 pseudogene 1 1.72381
LOC653786 otoancorin pseudogene 1.71454
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 1.70962
LOC100132352 FSHD region gene 1 pseudogene 1.64632
SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 1.61989
MOB2 MOB kinase activator 2 1.60004
VN1R1 vomeronasal 1 receptor 1 1.58185
ZNF749 zinc finger protein 749 1.58185
ZNF17 zinc finger protein 17 1.58185
ZNF547 zinc finger protein 547 1.56873
TRAPPC2P1 1.56873
ZNF543 zinc finger protein 543 1.56873
ZNF548 zinc finger protein 548 1.56873
ZNF304 zinc finger protein 304 1.56873
ZNF460 zinc finger protein 460 1.55978
ZNF417 zinc finger protein 417 1.55484
ZNF586 zinc finger protein 586 1.55441
ZNF416 zinc finger protein 416 1.55434
ZIK1 zinc finger protein interacting with K protein 1 1.55434
ZNF530 zinc finger protein 530 1.55428
ZNF134 zinc finger protein 134 1.55428
ZNF773 zinc finger protein 773 1.55359
ZNF550 zinc finger protein 550 1.55356
ZNF154 zinc finger protein 154 1.55351
ZNF551 zinc finger protein 551 1.55338
ZNF671 zinc finger protein 671 1.55338
ZNF776 zinc finger protein 776 1.55324
ZNF419 zinc finger protein 419 1.54041
ZNF772 zinc finger protein 772 1.53995
ZNF805 zinc finger protein 805 1.52942
AURKC aurora kinase C 1.52942
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1 1.52807
ZNF587 zinc finger protein 587 1.52795
ZNF587B zinc finger protein 587B 1.52795
ZNF814 zinc finger protein 814 1.5279
ZNF211 zinc finger protein 211 1.52674
ZSCAN4 zinc finger and SCAN domain containing 4 1.52607
NLRP9 NLR family, pyrin domain containing 9 1.51994
ZNF552 zinc finger protein 552 1.51813
ZSCAN1 zinc finger and SCAN domain containing 1 1.5163
ZIM3 zinc finger, imprinted 3 1.51618
DUXA double homeobox A 1.51618
ZNF544 zinc finger protein 544 1.516
ZNF135 zinc finger protein 135 1.51318
ZNF8 zinc finger protein 8 1.50984
ZNF264 zinc finger protein 264 1.50606
LOC100128398 uncharacterized LOC100128398 1.50448
ZNF418 zinc finger protein 418 1.50441
USP29 ubiquitin specific peptidase 29 1.50085
ZNF549 zinc finger protein 549 1.50031
ZNF329 zinc finger protein 329 1.49213
ZSCAN22 zinc finger and SCAN domain containing 22 1.48894
ZNF274 zinc finger protein 274 1.48859
MIR4754 microRNA 4754 1.48051
ZNF256 zinc finger protein 256 1.48037
C19ORF18 chromosome 19 open reading frame 18 1.48029
ZNF497 zinc finger protein 497 1.48021
A1BG-AS1 A1BG antisense RNA 1 1.48021
A1BG alpha-1-B glycoprotein 1.48021
ZNF606 zinc finger protein 606 1.4801
ZNF837 zinc finger protein 837 1.48001
CCR7 chemokine (C-C motif) receptor 7 1.47354
ZSCAN18 zinc finger and SCAN domain containing 18 1.47059
CCL4 chemokine (C-C motif) ligand 4 1.45399
CROCCP3 ciliary rootlet coiled-coil, rootletin pseudogene 3 1.44781
CROCCP2 ciliary rootlet coiled-coil, rootletin pseudogene 2 1.42386
KLK3 kallikrein-related peptidase 3 1.38924
KLKP1 kallikrein pseudogene 1 1.38921
KLK2 kallikrein-related peptidase 2 1.3888
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 1.38444
LINC00982 long intergenic non-protein coding RNA 982 1.37071
ACTRT2 actin-related protein T2 1.37062
MIR4251 microRNA 4251 1.36978
NBPF1 neuroblastoma breakpoint family, member 1 1.35673
KLK15 kallikrein-related peptidase 15 1.339

low copy number

Symbol Name Standardized Value
NPSR1-AS1 NPSR1 antisense RNA 1 -3.21049
TBC1D14 TBC1 domain family, member 14 -3.21049
C7 complement component 7 -3.21047
WDR25 WD repeat domain 25 -3.20555
WARS tryptophanyl-tRNA synthetase -3.20528
FAM101B family with sequence similarity 101, member B -2.96619
MSL1 male-specific lethal 1 homolog (Drosophila) -2.81329
CASC3 cancer susceptibility candidate 3 -2.81279
EFCAB6-AS1 EFCAB6 antisense RNA 1 -2.68095
LEF1 lymphoid enhancer-binding factor 1 -2.59447
LDLRAD3 low density lipoprotein receptor class A domain containing 3 -2.59447
WDR44 WD repeat domain 44 -2.3514
STAU1 staufen double-stranded RNA binding protein 1 -2.30409
PVT1 Pvt1 oncogene (non-protein coding) -2.22201
LTBP1 latent transforming growth factor beta binding protein 1 -2.2219
ARHGAP22 Rho GTPase activating protein 22 -2.19857
GLI3 GLI family zinc finger 3 -2.09165
LYPD6B LY6/PLAUR domain containing 6B -2.04712
CSRNP3 cysteine-serine-rich nuclear protein 3 -2.02465
MIR3973 microRNA 3973 -2.00727
FJX1 four jointed box 1 (Drosophila) -2.00692
FBXO31 F-box protein 31 -2.00168
EFCAB6 EF-hand calcium binding domain 6 -1.95966
PKIB protein kinase (cAMP-dependent, catalytic) inhibitor beta -1.92896
OR13C5 olfactory receptor, family 13, subfamily C, member 5 -1.92896
OR13C2 olfactory receptor, family 13, subfamily C, member 2 -1.92896
MIR1343 microRNA 1343 -1.90364
ELF5 E74-like factor 5 (ets domain transcription factor) -1.90354
CAT catalase -1.9033
TRIM44 tripartite motif containing 44 -1.90232
NAT10 N-acetyltransferase 10 (GCN5-related) -1.84787
CAPRIN1 cell cycle associated protein 1 -1.84785
KRTAP2-1 keratin associated protein 2-1 -1.84733
LMO2 LIM domain only 2 (rhombotin-like 1) -1.84677
CD44 CD44 molecule (Indian blood group) -1.8264
FOCAD focadhesin -1.79909
OCRL oculocerebrorenal syndrome of Lowe -1.79345
TRAF6 TNF receptor-associated factor 6, E3 ubiquitin protein ligase -1.79129
RAG2 recombination activating gene 2 -1.79128
RAG1 recombination activating gene 1 -1.79126
APIP APAF1 interacting protein -1.79109
PAMR1 peptidase domain containing associated with muscle regeneration 1 -1.75681
JAK2 Janus kinase 2 -1.74993
EHF ets homologous factor -1.74387
ANKMY1 ankyrin repeat and MYND domain containing 1 -1.71735
PDHX pyruvate dehydrogenase complex, component X -1.70676
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 -1.69461
C11ORF74 chromosome 11 open reading frame 74 -1.639
COMMD9 COMM domain containing 9 -1.63358
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -1.63018
LRRTM3 leucine rich repeat transmembrane neuronal 3 -1.6106
ASUN asunder spermatogenesis regulator -1.56399
ERGIC2 ERGIC and golgi 2 -1.54894
FAR2 fatty acyl CoA reductase 2 -1.54894
FGFR1OP2 FGFR1 oncogene partner 2 -1.53902
GOLT1B golgi transport 1B -1.53741
LYRM5 LYR motif containing 5 -1.5345
BHLHE41 basic helix-loop-helix family, member e41 -1.53135
SSPN sarcospan -1.53133
RASSF8-AS1 RASSF8 atnisense RNA 1 -1.53131
MIR4302 microRNA 4302 -1.53129
MANSC4 MANSC domain containing 4 -1.51225
MRPS35 mitochondrial ribosomal protein S35 -1.51225
REP15 RAB15 effector protein -1.51225
TM7SF3 transmembrane 7 superfamily member 3 -1.51201
MED21 mediator complex subunit 21 -1.51201
C12ORF71 chromosome 12 open reading frame 71 -1.512
SPX spexin hormone -1.51084
LDHB lactate dehydrogenase B -1.5105
RECQL RecQ helicase-like -1.51037
LRMP lymphoid-restricted membrane protein -1.50954
C12ORF77 chromosome 12 open reading frame 77 -1.50942
ETNK1 ethanolamine kinase 1 -1.5037
C2CD5 C2 calcium-dependent domain containing 5 -1.5032
ARNTL2 aryl hydrocarbon receptor nuclear translocator-like 2 -1.50263
CACNA1C-IT3 CACNA1C intronic transcript 3 -1.50104
CACNA1C-AS4 CACNA1C antisense RNA 4 -1.5007
DCP1B decapping mRNA 1B -1.49604
OVCH1 ovochymase 1 -1.49602
LINC00940 long intergenic non-protein coding RNA 940 -1.49556
FAM90A1 family with sequence similarity 90, member A1 -1.49321
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase -1.48494
PYROXD1 pyridine nucleotide-disulphide oxidoreductase domain 1 -1.48477
CASC1 cancer susceptibility candidate 1 -1.48231
LOC100507424 uncharacterized LOC100507424 -1.48086
RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 -1.48083
CACNA1C-AS1 CACNA1C antisense RNA 1 -1.48078
TULP3 tubby like protein 3 -1.48076
FKBP4 FK506 binding protein 4, 59kDa -1.48075
LOC283440 uncharacterized LOC283440 -1.48075
ITFG2 integrin alpha FG-GAP repeat containing 2 -1.48075
NRIP2 nuclear receptor interacting protein 2 -1.48075
LINC00477 long intergenic non-protein coding RNA 477 -1.47958
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -1.47939
FAM86FP family with sequence similarity 86, member A pseudogene -1.47932
IAPP islet amyloid polypeptide -1.47739
ZNF705A zinc finger protein 705A -1.47478
FAM66C family with sequence similarity 66, member C -1.47063
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8 -1.46872
KLHL42 kelch-like family member 42 -1.46228
STK38L serine/threonine kinase 38 like -1.46185
FOXM1 forkhead box M1 -1.46071
PRR5L proline rich 5 like -1.4602
PTHLH parathyroid hormone-like hormone -1.45979
SPSB2 splA/ryanodine receptor domain and SOCS box containing 2 -1.4566
IFFO1 intermediate filament family orphan 1 -1.45658
GAPDH glyceraldehyde-3-phosphate dehydrogenase -1.45658
ATN1 atrophin 1 -1.45657
C12ORF57 chromosome 12 open reading frame 57 -1.45657
MRPL51 mitochondrial ribosomal protein L51 -1.45655
SCARNA10 small Cajal body-specific RNA 10 -1.45655
NCAPD2 non-SMC condensin I complex, subunit D2 -1.45655
VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1) -1.45636
MIR200C microRNA 200c -1.45624
CD27-AS1 CD27 antisense RNA 1 -1.45624
TAPBPL TAP binding protein-like -1.45624
MIR141 microRNA 141 -1.45624
CD27 CD27 molecule -1.45624
PTPN6 protein tyrosine phosphatase, non-receptor type 6 -1.45624
RPL13P5 ribosomal protein L13 pseudogene 5 -1.45619
DSTNP2 destrin (actin depolymerizing factor) pseudogene 2 -1.45619
SCARNA12 small Cajal body-specific RNA 12 -1.45613
PHB2 prohibitin 2 -1.45613
ENO2 enolase 2 (gamma, neuronal) -1.45609
EMG1 EMG1 N1-specific pseudouridine methyltransferase -1.45603
SLCO1A2 solute carrier organic anion transporter family, member 1A2 -1.45328
MIR920 microRNA 920 -1.45163
MIR3649 microRNA 3649 -1.44753
LRTM2 leucine-rich repeats and transmembrane domains 2 -1.44724
FBXL14 F-box and leucine-rich repeat protein 14 -1.44689
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 -1.44536
SLC25A21 solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 -1.43428
ING4 inhibitor of growth family, member 4 -1.43423
ACRBP acrosin binding protein -1.4341
TPI1 triosephosphate isomerase 1 -1.43402
SCARNA11 small Cajal body-specific RNA 11 -1.43385
NOP2 NOP2 nucleolar protein -1.43385
CHD4 chromodomain helicase DNA binding protein 4 -1.43385
LPAR5 lysophosphatidic acid receptor 5 -1.43385
NANOG Nanog homeobox -1.43374
NANOGNB NANOG neighbor homeobox -1.43374
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 -1.43359
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A -1.43359
CLSTN3 calsyntenin 3 -1.43357
CD163 CD163 molecule -1.43357
C1RL complement component 1, r subcomponent-like -1.43357
RBP5 retinol binding protein 5, cellular -1.43357
C1R complement component 1, r subcomponent -1.43357
C1RL-AS1 C1RL antisense RNA 1 -1.43357
C1S complement component 1, s subcomponent -1.43356
SCNN1A sodium channel, non voltage gated 1 alpha subunit -1.43356
LPCAT3 lysophosphatidylcholine acyltransferase 3 -1.43355
APOBEC1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 -1.43352
DPPA3 developmental pluripotency associated 3 -1.43352
GDF3 growth differentiation factor 3 -1.43352
LRRC23 leucine rich repeat containing 23 -1.43351
PTMS parathymosin -1.43198
LAG3 lymphocyte-activation gene 3 -1.43198
PIANP PILR alpha associated neural protein -1.43185
MLF2 myeloid leukemia factor 2 -1.43149
C3AR1 complement component 3a receptor 1 -1.43132
FOXJ2 forkhead box J2 -1.43132
POU5F1P3 POU class 5 homeobox 1 pseudogene 3 -1.43128
CLEC4A C-type lectin domain family 4, member A -1.43128
NECAP1 NECAP endocytosis associated 1 -1.43119
ADIPOR2 adiponectin receptor 2 -1.42535
LINC00942 long intergenic non-protein coding RNA 942 -1.42523
CCDC91 coiled-coil domain containing 91 -1.42159
PEX5 peroxisomal biogenesis factor 5 -1.42066
ACSM4 acyl-CoA synthetase medium-chain family member 4 -1.42063
CD4 CD4 molecule -1.41708
GYS2 glycogen synthase 2 (liver) -1.41637
CLEC4C C-type lectin domain family 4, member C -1.41457
ZNF384 zinc finger protein 384 -1.41311
P3H3 prolyl 3-hydroxylase 3 -1.41299
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3 -1.41299
GPR162 G protein-coupled receptor 162 -1.41299
RAD52 RAD52 homolog (S. cerevisiae) -1.40693
ACTR3BP5 ACTR3B pseudogene 5 -1.40321
CD163L1 CD163 molecule-like 1 -1.40089
USP5 ubiquitin specific peptidase 5 (isopeptidase T) -1.39999
CDCA3 cell division cycle associated 3 -1.39999
SLCO1C1 solute carrier organic anion transporter family, member 1C1 -1.3989
CD9 CD9 molecule -1.39277
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3) -1.39236
COPS7A COP9 signalosome subunit 7A -1.39057
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -1.38801
LINC00999 long intergenic non-protein coding RNA 999 -1.38777
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5 -1.38402
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -1.37809
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1 -1.37556
TIGAR TP53 induced glycolysis regulatory phosphatase -1.37545
TARP TCR gamma alternate reading frame protein -1.37467
PRMT8 protein arginine methyltransferase 8 -1.37368
PARP11 poly (ADP-ribose) polymerase family, member 11 -1.37333
SEPT7P9 septin 7 pseudogene 9 -1.37016
GOLGA8B golgin A8 family, member B -1.36687
KDM5A lysine (K)-specific demethylase 5A -1.36685
TMTC1 transmembrane and tetratricopeptide repeat containing 1 -1.36536
LOC441666 zinc finger protein 91 pseudogene -1.36332
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -1.36254
SLCO1B7 solute carrier organic anion transporter family, member 1B7 (non-functional) -1.36236
LINC00937 long intergenic non-protein coding RNA 937 -1.36071
FGF23 fibroblast growth factor 23 -1.35724
GALNT8 polypeptide N-acetylgalactosaminyltransferase 8 -1.35722
RAD51AP1 RAD51 associated protein 1 -1.35722
C12ORF4 chromosome 12 open reading frame 4 -1.35722
NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa -1.35722
KCNA6 potassium channel, voltage gated shaker related subfamily A, member 6 -1.35722
DYRK4 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 -1.3572
FGF6 fibroblast growth factor 6 -1.35718
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 -1.35549
LINC00842 long intergenic non-protein coding RNA 842 -1.3545
ZNF33B zinc finger protein 33B -1.35176
BMS1 BMS1 ribosome biogenesis factor -1.35172
RERGL RERG/RAS-like -1.35017
LINC00317 long intergenic non-protein coding RNA 317 -1.3499
GRIK1 glutamate receptor, ionotropic, kainate 1 -1.34987
KRAS Kirsten rat sarcoma viral oncogene homolog -1.34931
CCDC77 coiled-coil domain containing 77 -1.34899
SLC6A13 solute carrier family 6 (neurotransmitter transporter), member 13 -1.34815
ERP27 endoplasmic reticulum protein 27 -1.34282
MIR3974 microRNA 3974 -1.34216
CAPZA3 capping protein (actin filament) muscle Z-line, alpha 3 -1.34127
PLCZ1 phospholipase C, zeta 1 -1.34117
AKAP3 A kinase (PRKA) anchor protein 3 -1.33953
MIR4294 microRNA 4294 -1.33947
RPL13AP5 ribosomal protein L13a pseudogene 5 -1.33945
LRRC18 leucine rich repeat containing 18 -1.33945
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -1.33844
MIR5100 microRNA 5100 -1.33641
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2 -1.3358
LINC00839 long intergenic non-protein coding RNA 839 -1.33495
ZNF37BP zinc finger protein 37B, pseudogene -1.33427
SKP1P2 S-phase kinase-associated protein 1 pseudogene 2 -1.3332
HLA-H major histocompatibility complex, class I, H (pseudogene) -1.33198
SMCO3 single-pass membrane protein with coiled-coil domains 3 -1.33187
WBP11 WW domain binding protein 11 -1.33184
H2AFJ H2A histone family, member J -1.33184
HIST4H4 histone cluster 4, H4 -1.33184
DERA deoxyribose-phosphate aldolase (putative) -1.33172
CLEC1A C-type lectin domain family 1, member A -1.33076
CLEC7A C-type lectin domain family 7, member A -1.33076
C10ORF128 chromosome 10 open reading frame 128 -1.33058
FAM170B family with sequence similarity 170, member B -1.33057
KLRC4 killer cell lectin-like receptor subfamily C, member 4 -1.33052
VSTM4 V-set and transmembrane domain containing 4 -1.33052
NTF3 neurotrophin 3 -1.33003
KLRC3 killer cell lectin-like receptor subfamily C, member 3 -1.32931
LINC00308 long intergenic non-protein coding RNA 308 -1.32688
ARHGDIB Rho GDP dissociation inhibitor (GDI) beta -1.32632
CLEC2D C-type lectin domain family 2, member D -1.32607
ART4 ADP-ribosyltransferase 4 (Dombrock blood group) -1.32592
ZNF239 zinc finger protein 239 -1.32269
ZNF485 zinc finger protein 485 -1.32266
ZNF32-AS3 ZNF32 antisense RNA 3 -1.32266
ZNF32 zinc finger protein 32 -1.32266
ZNF32-AS1 ZNF32 antisense RNA 1 -1.32266
ZNF32-AS2 ZNF32 antisense RNA 2 -1.32266
ZNF487 zinc finger protein 487 -1.32258
CLEC6A C-type lectin domain family 6, member A -1.32115