PEX16 Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description peroxisomal biogenesis factor 16|The protein encoded by this gene is an integral peroxisomal membrane protein. An inactivating nonsense mutation localized to this gene was observed in a patient with Zellweger syndrome of the complementation group CGD/CG9. Expression of this gene product morphologically and biochemically restores the formation of new peroxisomes, suggesting a role in peroxisome organization and biogenesis. Alternative splicing has been observed for this gene and two variants have been described. [provided by RefSeq, Jul 2008] (NCBI Entrez Gene Database, 9409)
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Genes

312 genes differentially expressed following the PEX16 gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
CD226 CD226 molecule 3.55428
LYZL6 lysozyme-like 6 3.55428
SLC39A5 solute carrier family 39 (zinc transporter), member 5 3.55428
CXCL2 chemokine (C-X-C motif) ligand 2 3.55428
DEFB124 defensin, beta 124 3.55428
C9ORF152 chromosome 9 open reading frame 152 3.55428
MEIKIN meiotic kinetochore factor 3.55428
ANKK1 ankyrin repeat and kinase domain containing 1 3.55428
SPDYE11 speedy/RINGO cell cycle regulator family member E11 3.55428
PBOV1 prostate and breast cancer overexpressed 1 3.55428
FABP2 fatty acid binding protein 2, intestinal 3.55428
HYAL4 hyaluronoglucosaminidase 4 3.55428
TCHH trichohyalin 3.55428
SIRPB2 signal-regulatory protein beta 2 3.55428
ADTRP androgen-dependent TFPI-regulating protein 3.55428
SKOR1 SKI family transcriptional corepressor 1 3.55428
FOXR1 forkhead box R1 3.55428
PAX9 paired box 9 3.55428
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 3.55428
LRRIQ4 leucine-rich repeats and IQ motif containing 4 3.55428
NPIPA8 nuclear pore complex interacting protein family, member A8 3.55428
ATAD3C ATPase family, AAA domain containing 3C 3.55428
EMCN endomucin 3.55428
TPRX1 tetra-peptide repeat homeobox 1 3.55428
BTBD16 BTB (POZ) domain containing 16 3.55428
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 3.55428
CD3E CD3e molecule, epsilon (CD3-TCR complex) 3.55428
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 3.55428
ANKRD30B ankyrin repeat domain 30B 3.55428
STAP1 signal transducing adaptor family member 1 3.55428
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal) 3.55428
MISP mitotic spindle positioning 3.55428
RASSF6 Ras association (RalGDS/AF-6) domain family member 6 3.55428
MYO16 myosin XVI 3.55428
MRC1 mannose receptor, C type 1 3.55428
CSNK2A3 casein kinase 2, alpha 3 polypeptide 3.55428
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 3.55428
ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 3.55428
THEMIS thymocyte selection associated 3.55428
OR2B6 olfactory receptor, family 2, subfamily B, member 6 3.55428
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 3.55428
SOX18 SRY (sex determining region Y)-box 18 3.55428
ERVW-1 endogenous retrovirus group W, member 1 3.55428
HBG1 hemoglobin, gamma A 3.55428
ZNF726 zinc finger protein 726 3.55428
MYH6 myosin, heavy chain 6, cardiac muscle, alpha 3.55428
PDC phosducin 3.55428
LMNTD1 lamin tail domain containing 1 3.55428
TNFSF8 tumor necrosis factor (ligand) superfamily, member 8 3.55428
GDF9 growth differentiation factor 9 3.55428
GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 3.55428
CCDC187 coiled-coil domain containing 187 3.55428
LRRC8C-DT LRRC8C divergent transcript 3.55428
H3C13 H3 clustered histone 13 3.55428
H4C15 H4 clustered histone 15 3.55428
GREP1 glycine rich extracellular protein 1 3.55428
SERTM2 serine rich and transmembrane domain containing 2 3.55428
CPHXL cytoplasmic polyadenylated homeobox like 3.55428
CFAP206 cilia and flagella associated protein 206 3.55428
TMEM273 transmembrane protein 273 3.55428
HAL histidine ammonia-lyase 3.55428
CELA2A chymotrypsin-like elastase family, member 2A 3.55428
COL19A1 collagen, type XIX, alpha 1 3.55428
SIX2 SIX homeobox 2 3.55428
ELF5 E74-like factor 5 (ets domain transcription factor) 3.55428
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18 3.55428
LY86 lymphocyte antigen 86 3.55428
LRRD1 leucine-rich repeats and death domain containing 1 3.55428
ROBO4 roundabout, axon guidance receptor, homolog 4 (Drosophila) 3.55428
NANOS3 nanos homolog 3 (Drosophila) 3.55428
RNF151 ring finger protein 151 3.55428
SLC22A10 solute carrier family 22, member 10 3.55428
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 3.55428
CCR8 chemokine (C-C motif) receptor 8 3.55428
LSP1 lymphocyte-specific protein 1 3.55428
RNF113B ring finger protein 113B 3.55428
CATSPER3 cation channel, sperm associated 3 3.55428
CBLN2 cerebellin 2 precursor 3.55428
DAO D-amino-acid oxidase 3.55428
PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit 3.55428
SMIM42 small integral membrane protein 42 3.55428
TAS2R50 taste receptor, type 2, member 50 3.55428
MAB21L2 mab-21-like 2 (C. elegans) 3.55428
WNT7B wingless-type MMTV integration site family, member 7B 3.55428
GBA3 glucosidase, beta, acid 3 (gene/pseudogene) 3.55428
KRT17 keratin 17, type I 3.55428
KRT14 keratin 14, type I 3.55428
LMOD2 leiomodin 2 (cardiac) 3.55428
TEX12 testis expressed 12 3.55428
SVOP SV2 related protein homolog (rat) 3.55428
HSPB9 heat shock protein, alpha-crystallin-related, B9 3.55428
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 3.55428
FZD1 frizzled class receptor 1 3.55428
ALDH3B2 aldehyde dehydrogenase 3 family, member B2 3.55428
FNDC8 fibronectin type III domain containing 8 3.55428
DGCR6 DiGeorge syndrome critical region gene 6 3.55428
KLHL41 kelch-like family member 41 3.55428
KAZALD1 Kazal-type serine peptidase inhibitor domain 1 3.55428
AQP6 aquaporin 6, kidney specific 3.55428
GOLGA6B golgin A6 family, member B 3.55428
UTS2R urotensin 2 receptor 3.55428
RESP18 regulated endocrine-specific protein 18 3.55428
C16ORF78 chromosome 16 open reading frame 78 3.55428
EFCAB3 EF-hand calcium binding domain 3 3.55428
APOC2 apolipoprotein C-II 3.55428
KCNK9 potassium channel, two pore domain subfamily K, member 9 3.55428
TBC1D28 TBC1 domain family, member 28 3.55428
C9ORF57 chromosome 9 open reading frame 57 3.55428
ERP27 endoplasmic reticulum protein 27 3.55428
RNF222 ring finger protein 222 3.55428
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5 3.55428
ZBED6 zinc finger, BED-type containing 6 3.55428
CNR2 cannabinoid receptor 2 (macrophage) 3.55428
EOMES eomesodermin 3.55428
C22ORF31 chromosome 22 open reading frame 31 3.55428
DRC7 dynein regulatory complex subunit 7 3.55428
ADRA1B adrenoceptor alpha 1B 3.55428
CCL1 chemokine (C-C motif) ligand 1 3.55428
ZNF648 zinc finger protein 648 3.55428
PLA2G2D phospholipase A2, group IID 3.55428
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 3.55428
PASD1 PAS domain containing 1 3.55428
PPEF2 protein phosphatase, EF-hand calcium binding domain 2 3.55428
FITM1 fat storage-inducing transmembrane protein 1 3.55428
POTEJ POTE ankyrin domain family, member J 3.55428
EPO erythropoietin 3.55428
POTEI POTE ankyrin domain family, member I 3.55428
ITGB7 integrin, beta 7 3.55428
GPR50 G protein-coupled receptor 50 3.55428
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 3.55428
CCNI2 cyclin I family, member 2 3.55428
C1ORF105 chromosome 1 open reading frame 105 3.55428
ANKRD55 ankyrin repeat domain 55 3.55428
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 3.47041
DENND2D DENN/MADD domain containing 2D 3.45123
AKAP12 A kinase (PRKA) anchor protein 12 3.33986
SKAP1 src kinase associated phosphoprotein 1 3.32922
CTBS chitobiase, di-N-acetyl- 3.14175
BTK Bruton agammaglobulinemia tyrosine kinase 2.95896
CLDN11 claudin 11 2.9395
UQCC3 ubiquinol-cytochrome c reductase complex assembly factor 3 2.9395
MEOX2 mesenchyme homeobox 2 2.93278
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2 2.93065
MT1H metallothionein 1H 2.9123
MATN3 matrilin 3 2.89355
OSBPL2 oxysterol binding protein-like 2 2.86003
ZFYVE9 zinc finger, FYVE domain containing 9 2.75664
MND1 meiotic nuclear divisions 1 homolog (S. cerevisiae) 2.74044
HES1 hes family bHLH transcription factor 1 2.71619
TSPYL1 TSPY-like 1 2.71371
MTRF1 mitochondrial translational release factor 1 2.71371
SNURF SNRPN upstream reading frame 2.70027
NKTR natural killer cell triggering receptor 2.64737
WDR53 WD repeat domain 53 2.51823
ZMAT4 zinc finger, matrin-type 4 2.51822
EPHA5 EPH receptor A5 2.42936
ZNF225 zinc finger protein 225 2.42936
GTSF1 gametocyte specific factor 1 2.42936
TARS1 threonyl-tRNA synthetase 1 2.42936
MYO1A myosin IA 2.42936
TMEM31 transmembrane protein 31 2.42936
INTS6L integrator complex subunit 6 like 2.42936
ELMOD1 ELMO/CED-12 domain containing 1 2.42936
RAD9B RAD9 homolog B (S. pombe) 2.42936
IL18R1 interleukin 18 receptor 1 2.42936
SRBD1 S1 RNA binding domain 1 2.42936
GABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 1 2.42936
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3 2.42936
GLTP glycolipid transfer protein 2.42936
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 2.39878
TTC23L tetratricopeptide repeat domain 23-like 2.35041
FUT2 fucosyltransferase 2 (secretor status included) 2.35041
RBFA ribosome binding factor A (putative) 2.33844
CFAP99 cilia and flagella associated protein 99 2.30724
RHOXF2 Rhox homeobox family, member 2 2.30724
RASGEF1A RasGEF domain family, member 1A 2.27528
KLK5 kallikrein-related peptidase 5 2.27528
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G 2.27528
ZCCHC9 zinc finger, CCHC domain containing 9 2.27361
IL17D interleukin 17D 2.27142
CATIP ciliogenesis associated TTC17 interacting protein 2.24916
PJVK pejvakin 2.22788
GNB1L guanine nucleotide binding protein (G protein), beta polypeptide 1-like 2.20225
GGCT gamma-glutamylcyclotransferase 2.20183
NABP2 nucleic acid binding protein 2 2.19657
ASXL3 additional sex combs like transcriptional regulator 3 2.18896
ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 2.18896
ZNF723 zinc finger protein 723 2.1768
RNF166 ring finger protein 166 2.16598
EMC2 ER membrane protein complex subunit 2 2.1583
WDR45B WD repeat domain 45B 2.15436
MPC1 mitochondrial pyruvate carrier 1 2.15038
EMSY EMSY transcriptional repressor, BRCA2 interacting 2.15038
NCOA5 nuclear receptor coactivator 5 2.13657
CDH24 cadherin 24, type 2 2.12449
RGMB repulsive guidance molecule family member b 2.12045
PEX11G peroxisomal biogenesis factor 11 gamma 2.09474
ATRAID all-trans retinoic acid-induced differentiation factor 2.08418
MKX mohawk homeobox 2.08418
STRBP spermatid perinuclear RNA binding protein 2.07126
NRXN2 neurexin 2 2.03756
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 2.03088
NCKIPSD NCK interacting protein with SH3 domain 2.03088
CCZ1 CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae) 2.01991
MT1G metallothionein 1G 2.0192
LRIG3 leucine-rich repeats and immunoglobulin-like domains 3 2.01307
ST7 suppression of tumorigenicity 7 2.01307
PARVB parvin, beta 2.01307
ATP5PD ATP synthase peripheral stalk subunit d 2.01307

decreased expression

Symbol Name Standardized Value
CRYGN crystallin, gamma N -3.55428
LAMP3 lysosomal-associated membrane protein 3 -3.55428
KLRK1 killer cell lectin-like receptor subfamily K, member 1 -3.55428
ADGRE3 adhesion G protein-coupled receptor E3 -3.55428
SLC5A8 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 -3.55428
DUSP8 dual specificity phosphatase 8 -3.55428
DNAI2 dynein, axonemal, intermediate chain 2 -3.55428
MAGEB17 melanoma antigen family B17 -3.55428
CNTNAP4 contactin associated protein-like 4 -3.55428
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -3.55428
EPN3 epsin 3 -3.55428
ZNF316 zinc finger protein 316 -3.55428
ADAM29 ADAM metallopeptidase domain 29 -3.55428
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 -3.55428
DLX4 distal-less homeobox 4 -3.55428
ABCG4 ATP-binding cassette, sub-family G (WHITE), member 4 -3.55428
SUSD2 sushi domain containing 2 -3.55428
OSR2 odd-skipped related transciption factor 2 -3.55428
EPPIN epididymal peptidase inhibitor -3.55428
CLNK cytokine-dependent hematopoietic cell linker -3.55428
IFITM10 interferon induced transmembrane protein 10 -3.55428
DCAF4L1 DDB1 and CUL4 associated factor 4-like 1 -3.55428
SLC22A25 solute carrier family 22, member 25 -3.55428
AKR1B15 aldo-keto reductase family 1, member B15 -3.55428
TREH trehalase (brush-border membrane glycoprotein) -3.55428
CAPN9 calpain 9 -3.55428
CLDN14 claudin 14 -3.55428
LAIR1 leukocyte-associated immunoglobulin-like receptor 1 -3.55428
SLC47A2 solute carrier family 47 (multidrug and toxin extrusion), member 2 -3.55428
CLEC20A C-type lectin domain containing 20A -3.55428
LY6L lymphocyte antigen 6 family member L -3.55428
CAMK2B calcium/calmodulin-dependent protein kinase II beta -3.55428
TMEM272 transmembrane protein 272 -3.55428
KRT222 keratin 222, type II -3.55428
OR13G1 olfactory receptor, family 13, subfamily G, member 1 -3.55428
HS3ST6 heparan sulfate (glucosamine) 3-O-sulfotransferase 6 -3.55428
TRIM7 tripartite motif containing 7 -3.55428
CST1 cystatin SN -3.55428
GPR12 G protein-coupled receptor 12 -3.55428
HSD17B13 hydroxysteroid (17-beta) dehydrogenase 13 -3.55428
KLHL6 kelch-like family member 6 -3.55428
VWA3B von Willebrand factor A domain containing 3B -3.55428
RBM6 RNA binding motif protein 6 -3.42875
PTRHD1 peptidyl-tRNA hydrolase domain containing 1 -3.1657
WBP1 WW domain binding protein 1 -3.15008
ZNF165 zinc finger protein 165 -3.00016
DGAT2 diacylglycerol O-acyltransferase 2 -2.99217
DNAH17 dynein, axonemal, heavy chain 17 -2.99217
IQSEC3 IQ motif and Sec7 domain 3 -2.86851
WFDC10B WAP four-disulfide core domain 10B -2.79752
HIF3A hypoxia inducible factor 3, alpha subunit -2.71619
SMIM18 small integral membrane protein 18 -2.71006
COQ10B coenzyme Q10 homolog B (S. cerevisiae) -2.70512
CCDC88B coiled-coil domain containing 88B -2.70073
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) -2.65891
ZNF699 zinc finger protein 699 -2.60484
TEKTIP1 tektin bundle interacting protein 1 -2.60031
LOC124904542 uncharacterized LOC124904542 -2.60031
RERGL RERG/RAS-like -2.60031
CD38 CD38 molecule -2.60031
CCDC7 coiled-coil domain containing 7 -2.5502
TMEM135 transmembrane protein 135 -2.51714
CDKL4 cyclin-dependent kinase-like 4 -2.50998
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -2.49069
CDC37L1 cell division cycle 37-like 1 -2.46645
ZNF286A zinc finger protein 286A -2.42936
KIF20A kinesin family member 20A -2.42936
GRIP2 glutamate receptor interacting protein 2 -2.40217
TACC2 transforming, acidic coiled-coil containing protein 2 -2.37666
CLDN19 claudin 19 -2.36504
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -2.35881
TMOD2 tropomodulin 2 (neuronal) -2.34458
OVCH2 ovochymase 2 (gene/pseudogene) -2.34189
CCDC152 coiled-coil domain containing 152 -2.34189
HSPB6 heat shock protein, alpha-crystallin-related, B6 -2.34189
SCARF1 scavenger receptor class F, member 1 -2.34189
SYNPO2L synaptopodin 2-like -2.34189
SPOPL speckle-type POZ protein-like -2.3373
TAS2R31 taste receptor, type 2, member 31 -2.30724
PLAC8 placenta-specific 8 -2.30724
SAP30 Sin3A-associated protein, 30kDa -2.28258
CFAP70 cilia and flagella associated protein 70 -2.28215
ENTREP3 endosomal transmembrane epsin interactor 3 -2.25273
SPATA5L1 spermatogenesis associated 5-like 1 -2.20869
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 -2.20183
DBNL drebrin-like -2.20183
CHIC2 cysteine-rich hydrophobic domain 2 -2.18896
ACOT7 acyl-CoA thioesterase 7 -2.18896
CDC42SE1 CDC42 small effector 1 -2.18012
LEPROTL1 leptin receptor overlapping transcript-like 1 -2.14963
RPL36A ribosomal protein L36a -2.14794
ZNF385B zinc finger protein 385B -2.11256
CCDC6 coiled-coil domain containing 6 -2.10131
SH3GLB1 SH3-domain GRB2-like endophilin B1 -2.0974
THAP2 THAP domain containing, apoptosis associated protein 2 -2.09433
FOXO1 forkhead box O1 -2.04801
HSPB1 heat shock 27kDa protein 1 -2.0388
CAND1 cullin-associated and neddylation-dissociated 1 -2.0341
MINDY3 MINDY lysine 48 deubiquitinase 3 -2.01991
LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) -2.01307
MXD3 MAX dimerization protein 3 -2.01307
NRCAM neuronal cell adhesion molecule -2.00816
SSH3 slingshot protein phosphatase 3 -2.00062