PF-06260933_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description PF-06260933 perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the PF-06260933_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LSAMP limbic system-associated membrane protein 0.0592992
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0564142
TLE4 transducin-like enhancer of split 4 0.0476969
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0409838
FMN1 formin 1 0.0407163
PLAT plasminogen activator, tissue 0.0376166
TRIO trio Rho guanine nucleotide exchange factor 0.0320109
DSCAM Down syndrome cell adhesion molecule 0.0301468
ITPRID2 ITPR interacting domain containing 2 0.028585
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0284522
ZBTB20 zinc finger and BTB domain containing 20 0.0268787
DST dystonin 0.0260318
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0255706
SOS1 son of sevenless homolog 1 (Drosophila) 0.0243139
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0231634
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0218577
ZSWIM6 zinc finger, SWIM-type containing 6 0.0217444
PTPRD protein tyrosine phosphatase, receptor type, D 0.0217325
VMP1 vacuole membrane protein 1 0.0216709
NRG1 neuregulin 1 0.0215452
LINGO2 leucine rich repeat and Ig domain containing 2 0.0212664
EXT1 exostosin glycosyltransferase 1 0.0211789
RNF213 ring finger protein 213 0.0211429
LIMCH1 LIM and calponin homology domains 1 0.0211014
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0208164
YEATS2 YEATS domain containing 2 0.019763
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0191265
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0188748
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0188659
BPTF bromodomain PHD finger transcription factor 0.0185722
AHR aryl hydrocarbon receptor 0.0184551
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0180913
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0179394
DPH6 diphthamine biosynthesis 6 0.0175342
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0173701
AKAP12 A kinase (PRKA) anchor protein 12 0.0169994
CALD1 caldesmon 1 0.0167505
CHD9 chromodomain helicase DNA binding protein 9 0.0165771
PRKD1 protein kinase D1 0.016412
MEF2A myocyte enhancer factor 2A 0.0163302
ZNF638 zinc finger protein 638 0.0162756
MTUS1 microtubule associated tumor suppressor 1 0.0160245
VCL vinculin 0.015974
ANTXR1 anthrax toxin receptor 1 0.0159648
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0156455
PHF3 PHD finger protein 3 0.0156218
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0152922
SYT1 synaptotagmin I 0.0152738
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0152246
FAM13A family with sequence similarity 13, member A 0.0151979
ZMIZ1 zinc finger, MIZ-type containing 1 0.0149405
MACF1 microtubule-actin crosslinking factor 1 0.0148482
INTS6 integrator complex subunit 6 0.014797
FER fer (fps/fes related) tyrosine kinase 0.0146738
SMAD3 SMAD family member 3 0.0144033
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0142185
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0141195
NRIP1 nuclear receptor interacting protein 1 0.0139916
NPAS2 neuronal PAS domain protein 2 0.0139305
FAM107B family with sequence similarity 107, member B 0.0138804
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0135088
RUNX1 runt-related transcription factor 1 0.0134613
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0133303
RAD51B RAD51 paralog B 0.0132337
RABGAP1L RAB GTPase activating protein 1-like 0.013112
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0130618
ATM ATM serine/threonine kinase 0.0129413
RALYL RALY RNA binding protein-like 0.0127262
ADGRB3 adhesion G protein-coupled receptor B3 0.0124703
ANTXR2 anthrax toxin receptor 2 0.0122524
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 0.0121886
MKI67 marker of proliferation Ki-67 0.0121144
PDGFRB platelet-derived growth factor receptor, beta polypeptide 0.0121131
GPC5 glypican 5 0.0120995
ADARB1 adenosine deaminase, RNA-specific, B1 0.012073
PBX1 pre-B-cell leukemia homeobox 1 0.0120453
VEGFA vascular endothelial growth factor A 0.0120254
TCF12 transcription factor 12 0.0119734
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0115183
BCAS3 breast carcinoma amplified sequence 3 0.0113683
MAML2 mastermind-like 2 (Drosophila) 0.0113358
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0113085
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0112225
NALF1 NALCN channel auxiliary factor 1 0.0111811
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0110705
MTREX Mtr4 exosome RNA helicase 0.0110545
KDM4B lysine (K)-specific demethylase 4B 0.0110489
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0109568
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0108869
GPATCH2L G patch domain containing 2-like 0.0107922
PCNX1 pecanex 1 0.0107501
ZFC3H1 zinc finger, C3H1-type containing 0.010722
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0105635
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0105612
PELI1 pellino E3 ubiquitin protein ligase 1 0.0105596
EIF1 eukaryotic translation initiation factor 1 0.0105095
SMYD3 SET and MYND domain containing 3 0.0105018
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0103282
FOXP1 forkhead box P1 0.0102784
KDM5A lysine (K)-specific demethylase 5A 0.0102439

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.311032
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.120607
VIM vimentin -0.0829043
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.067213
PTMA prothymosin, alpha -0.0543012
RPS6 ribosomal protein S6 -0.0474387
HILPDA hypoxia inducible lipid droplet-associated -0.045203
RPLP1 ribosomal protein, large, P1 -0.0393741
WDR45B WD repeat domain 45B -0.0381617
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0380415
GNAS GNAS complex locus -0.0311335
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0307225
LPIN1 lipin 1 -0.027754
CANX calnexin -0.0271605
IGF2 insulin-like growth factor 2 -0.0265235
RPL35A ribosomal protein L35a -0.0259006
RPS19 ribosomal protein S19 -0.0257186
TMSB10 thymosin beta 10 -0.025249
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0250306
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0238887
FTL ferritin, light polypeptide -0.0233401
NDRG1 N-myc downstream regulated 1 -0.0231813
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0231184
RPL34 ribosomal protein L34 -0.0231058
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0230021
PDIA3 protein disulfide isomerase family A, member 3 -0.0223854
KTN1 kinectin 1 (kinesin receptor) -0.0220108
POTEF POTE ankyrin domain family, member F -0.0219656
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0216972
DSTN destrin (actin depolymerizing factor) -0.0216808
GLG1 golgi glycoprotein 1 -0.0214696
RPS12 ribosomal protein S12 -0.0214408
RPL12 ribosomal protein L12 -0.0211291
RPL26 ribosomal protein L26 -0.0208602
RPS16 ribosomal protein S16 -0.0208494
SCG2 secretogranin II -0.0203666
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.020364
RPL32 ribosomal protein L32 -0.0197856
RAB6A RAB6A, member RAS oncogene family -0.0194293
KMT2E lysine (K)-specific methyltransferase 2E -0.0193165
RPS24 ribosomal protein S24 -0.019271
RPLP0 ribosomal protein, large, P0 -0.0190589
LMAN1 lectin, mannose-binding, 1 -0.0189505
PTK2 protein tyrosine kinase 2 -0.0186633
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0185375
NPEPPS aminopeptidase puromycin sensitive -0.0181274
ASPH aspartate beta-hydroxylase -0.0180499
TPT1 tumor protein, translationally-controlled 1 -0.0180491
S100A9 S100 calcium binding protein A9 -0.0174641
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0173842
RPL23 ribosomal protein L23 -0.0171433
GATAD2B GATA zinc finger domain containing 2B -0.0169962
WSB1 WD repeat and SOCS box containing 1 -0.01676
PFN1 profilin 1 -0.01658
MAP1B microtubule-associated protein 1B -0.0164626
RPL37 ribosomal protein L37 -0.0163972
RPS25 ribosomal protein S25 -0.0160207
KDM2A lysine (K)-specific demethylase 2A -0.0160074
OGA O-GlcNAcase -0.0158945
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0158082
VDAC1 voltage-dependent anion channel 1 -0.015443
RPS14 ribosomal protein S14 -0.0153948
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0151231
USP3 ubiquitin specific peptidase 3 -0.015117
RPS3 ribosomal protein S3 -0.015051
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0148544
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) -0.0148197
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0147513
RAD21 RAD21 homolog (S. pombe) -0.0146924
ANXA2 annexin A2 -0.0146734
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0146291
UBC ubiquitin C -0.0145771
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0144521
RPL13A ribosomal protein L13a -0.0143999
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0143819
RYBP RING1 and YY1 binding protein -0.014219
SERF2 small EDRK-rich factor 2 -0.0139422
RPL28 ribosomal protein L28 -0.0137646
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0136611
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0136338
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0136243
RPL31 ribosomal protein L31 -0.0136219
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0135469
DACH2 dachshund family transcription factor 2 -0.0134508
B2M beta-2-microglobulin -0.0134489
USP34 ubiquitin specific peptidase 34 -0.0134324
RAB1A RAB1A, member RAS oncogene family -0.0131434
TMEM123 transmembrane protein 123 -0.0130419
RLF rearranged L-myc fusion -0.0129845
CCND1 cyclin D1 -0.0129843
GOLGA4 golgin A4 -0.0129665
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0129577
YBX1 Y box binding protein 1 -0.0128777
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 -0.012869
ACBD3 acyl-CoA binding domain containing 3 -0.0127021
COPA coatomer protein complex, subunit alpha -0.0126356
KPNB1 karyopherin (importin) beta 1 -0.0126001
KLHL24 kelch-like family member 24 -0.0124838
WIPF2 WAS/WASL interacting protein family, member 2 -0.0124809
RPL35 ribosomal protein L35 -0.0124728