PF-06260933_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description PF-06260933 perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the PF-06260933_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.151997
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0988526
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0982336
SAMD4A sterile alpha motif domain containing 4A 0.0925994
IGF2 insulin-like growth factor 2 0.0872794
GPC6 glypican 6 0.0731666
FN1 fibronectin 1 0.0596177
FAT1 FAT atypical cadherin 1 0.0577646
C3 complement component 3 0.0570376
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0535338
LRMDA leucine rich melanocyte differentiation associated 0.0531507
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0510169
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0503893
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0499941
MRTFA myocardin related transcription factor A 0.0492058
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0451051
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0429644
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0424358
MAML2 mastermind-like 2 (Drosophila) 0.0405284
SVIL supervillin 0.0405143
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0403093
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0389754
FOXP1 forkhead box P1 0.0384994
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0376181
IQSEC1 IQ motif and Sec7 domain 1 0.0359583
RAD51B RAD51 paralog B 0.0354501
YAP1 Yes-associated protein 1 0.0352218
JAG1 jagged 1 0.0346971
ASPH aspartate beta-hydroxylase 0.0339804
ARHGAP9 Rho GTPase activating protein 9 0.0337523
ITGB5 integrin, beta 5 0.032584
BCL2L1 BCL2-like 1 0.0322493
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0320411
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0310834
LCOR ligand dependent nuclear receptor corepressor 0.0306613
NKD1 naked cuticle homolog 1 (Drosophila) 0.0299648
VCL vinculin 0.0296351
TNS1 tensin 1 0.0296326
FILIP1L filamin A interacting protein 1-like 0.0291159
MALRD1 MAM and LDL receptor class A domain containing 1 0.0286434
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0278774
NPAS2 neuronal PAS domain protein 2 0.0267264
EIF4B eukaryotic translation initiation factor 4B 0.0259709
FKTN fukutin 0.0255819
GSE1 Gse1 coiled-coil protein 0.0254972
GRB10 growth factor receptor-bound protein 10 0.0254003
ABTB3 ankyrin repeat and BTB domain containing 3 0.0250677
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0249705
ANXA5 annexin A5 0.0243714
FRK fyn-related Src family tyrosine kinase 0.0240289
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0239453
TRIM24 tripartite motif containing 24 0.023764
TNS3 tensin 3 0.023608
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0232507
FAM107B family with sequence similarity 107, member B 0.0231942
LPP LIM domain containing preferred translocation partner in lipoma 0.0229629
PLSCR1 phospholipid scramblase 1 0.0229127
PPARD peroxisome proliferator-activated receptor delta 0.022701
FOXO1 forkhead box O1 0.0226503
SOX5 SRY (sex determining region Y)-box 5 0.0225395
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.0221478
PDLIM5 PDZ and LIM domain 5 0.0217431
RIGI RNA sensor RIG-I 0.0212869
CEMIP2 cell migration inducing hyaluronidase 2 0.020954
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0208508
FNIP1 folliculin interacting protein 1 0.0204423
FHIT fragile histidine triad 0.0203589
TTC28 tetratricopeptide repeat domain 28 0.0202442
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0202113
ZBTB20 zinc finger and BTB domain containing 20 0.0201882
NABP1 nucleic acid binding protein 1 0.020188
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0199891
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0198819
SMAD3 SMAD family member 3 0.019809
NACA nascent polypeptide-associated complex alpha subunit 0.0196388
MYO1E myosin IE 0.0195883
N4BP1 NEDD4 binding protein 1 0.0195817
DOCK4 dedicator of cytokinesis 4 0.0194168
APLP2 amyloid beta (A4) precursor-like protein 2 0.0193885
MTSS1 metastasis suppressor 1 0.0192953
CRLS1 cardiolipin synthase 1 0.0192821
KDM4C lysine (K)-specific demethylase 4C 0.0192641
TBCK TBC1 domain containing kinase 0.0191484
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0191286
DNAH17 dynein, axonemal, heavy chain 17 0.0190604
ALPK2 alpha-kinase 2 0.0190126
KIAA1217 KIAA1217 0.0188885
ZMIZ1 zinc finger, MIZ-type containing 1 0.0182216
ZEB1 zinc finger E-box binding homeobox 1 0.0181408
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0180942
SP3 Sp3 transcription factor 0.018045
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0179235
KYNU kynureninase 0.0177646
BRD2 bromodomain containing 2 0.0177627
BBX bobby sox homolog (Drosophila) 0.0177294
ZNRF3 zinc and ring finger 3 0.0176414
FOXN3 forkhead box N3 0.0175949
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0175754
ZNF518A zinc finger protein 518A 0.0175113
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0174478

decreased expression

Symbol Name Standardized Value
TPT1 tumor protein, translationally-controlled 1 -0.192892
FBF1 Fas (TNFRSF6) binding factor 1 -0.159232
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.152652
ENO1 enolase 1, (alpha) -0.123083
GPC3 glypican 3 -0.122385
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.111309
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.10089
TM4SF1 transmembrane 4 L six family member 1 -0.10048
APOB apolipoprotein B -0.097374
FTL ferritin, light polypeptide -0.0953702
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0947745
APOA2 apolipoprotein A-II -0.09043
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0864403
RPS6 ribosomal protein S6 -0.08502
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0771318
RPLP0 ribosomal protein, large, P0 -0.0762316
TRIM26 tripartite motif containing 26 -0.0732943
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0729467
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0728356
TMEM123 transmembrane protein 123 -0.0710195
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0689779
PEG3 paternally expressed 3 -0.0686978
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0670561
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0638118
RPL12 ribosomal protein L12 -0.0625896
KDM3A lysine (K)-specific demethylase 3A -0.0594121
STAU1 staufen double-stranded RNA binding protein 1 -0.0592487
RPS24 ribosomal protein S24 -0.0590022
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0587723
H1-0 H1.0 linker histone -0.0564764
RPS8 ribosomal protein S8 -0.054529
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0543455
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0539239
CCL20 chemokine (C-C motif) ligand 20 -0.0539167
LYZ lysozyme -0.0524342
CP ceruloplasmin (ferroxidase) -0.0517374
AKAP12 A kinase (PRKA) anchor protein 12 -0.0514793
DDIT4 DNA-damage-inducible transcript 4 -0.0511733
RPLP1 ribosomal protein, large, P1 -0.0492268
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0484226
A2M alpha-2-macroglobulin -0.0472858
FMNL2 formin-like 2 -0.0465228
AHSG alpha-2-HS-glycoprotein -0.0464798
DSPP dentin sialophosphoprotein -0.0456812
RPS27A ribosomal protein S27a -0.0449843
RPL32 ribosomal protein L32 -0.0448088
PERP PERP, TP53 apoptosis effector -0.0432922
WDR45B WD repeat domain 45B -0.0425227
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0405736
RPL11 ribosomal protein L11 -0.0404333
RPL34 ribosomal protein L34 -0.038778
RPL35A ribosomal protein L35a -0.0387554
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0385992
PDIA3 protein disulfide isomerase family A, member 3 -0.0384149
GNAS GNAS complex locus -0.0384091
SDC4 syndecan 4 -0.0378937
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0375159
PTPRF protein tyrosine phosphatase, receptor type, F -0.0369536
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0367063
APOE apolipoprotein E -0.0365896
NPR2 natriuretic peptide receptor 2 -0.0358706
NPEPPS aminopeptidase puromycin sensitive -0.0356582
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0355176
GDF15 growth differentiation factor 15 -0.0353836
LDHA lactate dehydrogenase A -0.03525
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0351221
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0349199
IER3 immediate early response 3 -0.0346051
RPS19 ribosomal protein S19 -0.0341519
HDLBP high density lipoprotein binding protein -0.0337221
NIPBL Nipped-B homolog (Drosophila) -0.0336548
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0336413
RAD21 RAD21 homolog (S. pombe) -0.0334245
SELENOP selenoprotein P -0.0331696
KIF5B kinesin family member 5B -0.032964
PGK1 phosphoglycerate kinase 1 -0.0319944
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0318511
CANX calnexin -0.0317491
RRBP1 ribosome binding protein 1 -0.0317381
RPS23 ribosomal protein S23 -0.031603
KRT18 keratin 18, type I -0.0315554
CALR calreticulin -0.0312138
VDAC1 voltage-dependent anion channel 1 -0.0310789
MATR3 matrin 3 -0.0307136
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.030395
ARHGAP21 Rho GTPase activating protein 21 -0.0301312
FAM162A family with sequence similarity 162, member A -0.0298929
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0294344
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0292633
QKI QKI, KH domain containing, RNA binding -0.0292517
TF transferrin -0.0290821
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.028982
NAMPT nicotinamide phosphoribosyltransferase -0.0288079
BHLHE40 basic helix-loop-helix family, member e40 -0.0285348
APOC1 apolipoprotein C-I -0.0285264
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0282514
NAP1L1 nucleosome assembly protein 1-like 1 -0.0279846
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0279667
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0278449
WAC WW domain containing adaptor with coiled-coil -0.027783