PF-06260933_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description PF-06260933 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the PF-06260933_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MUC6 mucin 6, oligomeric mucus/gel-forming 0.184281
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.146246
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.123578
TNS4 tensin 4 0.102829
VEGFA vascular endothelial growth factor A 0.0947929
NDRG1 N-myc downstream regulated 1 0.079709
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0729095
EREG epiregulin 0.0686977
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0659761
ABHD2 abhydrolase domain containing 2 0.062483
CD46 CD46 molecule, complement regulatory protein 0.0618819
KLF3 Kruppel-like factor 3 (basic) 0.0609715
LDHA lactate dehydrogenase A 0.0597284
AREG amphiregulin 0.0589876
FAM13A family with sequence similarity 13, member A 0.0554583
TXNIP thioredoxin interacting protein 0.0542405
FAT1 FAT atypical cadherin 1 0.0516659
TPM4 tropomyosin 4 0.0505839
PLAUR plasminogen activator, urokinase receptor 0.0497316
RPS12 ribosomal protein S12 0.0473909
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0468864
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0441864
B2M beta-2-microglobulin 0.0398429
RPS6 ribosomal protein S6 0.038673
FOSL1 FOS-like antigen 1 0.0386368
KDM7A lysine (K)-specific demethylase 7A 0.0378549
SRRM2 serine/arginine repetitive matrix 2 0.0376445
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0364394
N4BP2L2 NEDD4 binding protein 2-like 2 0.0360836
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 0.0345228
PPARG peroxisome proliferator-activated receptor gamma 0.0343455
RPL9 ribosomal protein L9 0.0338653
MACF1 microtubule-actin crosslinking factor 1 0.0337453
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0335359
ITPRID2 ITPR interacting domain containing 2 0.0335065
GCC2 GRIP and coiled-coil domain containing 2 0.0330971
ABHD17C abhydrolase domain containing 17C 0.0326313
HSPA8 heat shock 70kDa protein 8 0.0321209
CDH17 cadherin 17, LI cadherin (liver-intestine) 0.0314352
EIF4B eukaryotic translation initiation factor 4B 0.0314322
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.0308664
RNF43 ring finger protein 43 0.0303662
RIGI RNA sensor RIG-I 0.0299503
CDCP1 CUB domain containing protein 1 0.0296524
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0294554
PRSS3 protease, serine, 3 0.0293801
ONECUT3 one cut homeobox 3 0.0290511
PTBP3 polypyrimidine tract binding protein 3 0.0286283
AVL9 AVL9 homolog (S. cerevisiase) 0.0285112
PTEN phosphatase and tensin homolog 0.0284452
CALB1 calbindin 1, 28kDa 0.0278778
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0265837
TMF1 TATA element modulatory factor 1 0.026159
ATXN1 ataxin 1 0.0253753
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0253322
RPL37A ribosomal protein L37a 0.0253213
UBA6 ubiquitin-like modifier activating enzyme 6 0.0250039
NEBL nebulette 0.0247939
ADD3 adducin 3 (gamma) 0.0247138
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.024707
RPS17 ribosomal protein S17 0.0246162
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0245465
RPS3 ribosomal protein S3 0.0243422
PTPRR protein tyrosine phosphatase, receptor type, R 0.0242333
RHOA ras homolog family member A 0.0242006
UBE2H ubiquitin-conjugating enzyme E2H 0.0241682
KIF5B kinesin family member 5B 0.0241529
TMEM165 transmembrane protein 165 0.0240243
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0239098
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.023353
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0233515
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.023171
PERP PERP, TP53 apoptosis effector 0.0228615
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0228492
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 0.0224475
SSR1 signal sequence receptor, alpha 0.0222994
TMEM45B transmembrane protein 45B 0.022288
PRRC2C proline-rich coiled-coil 2C 0.0221689
SCFD1 sec1 family domain containing 1 0.0219098
EEF2 eukaryotic translation elongation factor 2 0.0216927
SPRED1 sprouty-related, EVH1 domain containing 1 0.021409
ITGAV integrin, alpha V 0.0210872
AKAP9 A kinase (PRKA) anchor protein 9 0.0210434
BMP4 bone morphogenetic protein 4 0.0210383
ZNF292 zinc finger protein 292 0.0209322
SHB Src homology 2 domain containing adaptor protein B 0.0204839
SNX13 sorting nexin 13 0.0203724
CAB39 calcium binding protein 39 0.0203469
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0203274
PLS1 plastin 1 0.0202653
GOLGA4 golgin A4 0.020251
FHL2 four and a half LIM domains 2 0.0201607
ESYT2 extended synaptotagmin-like protein 2 0.0200967
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0200831
ZFP36L2 ZFP36 ring finger protein-like 2 0.0199004
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0198233
SLK STE20-like kinase 0.0198083
CDK19 cyclin-dependent kinase 19 0.0195943
UBXN4 UBX domain protein 4 0.019583
CLDN4 claudin 4 0.0195828

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.369444
NPSR1 neuropeptide S receptor 1 -0.167
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.14766
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.105901
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0987217
NALF1 NALCN channel auxiliary factor 1 -0.09176
AHNAK AHNAK nucleoprotein -0.0844565
PTPRK protein tyrosine phosphatase, receptor type, K -0.0643111
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.064172
VCL vinculin -0.0612874
TMSB10 thymosin beta 10 -0.0550395
LAMA4 laminin, alpha 4 -0.0520812
LOC112694756 uncharaterized LOC112694756 -0.0502201
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0496466
GMDS GDP-mannose 4,6-dehydratase -0.0481692
SLC35F3 solute carrier family 35, member F3 -0.0466191
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0462511
FTH1 ferritin, heavy polypeptide 1 -0.0457248
H1-0 H1.0 linker histone -0.0454207
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0448368
EHBP1 EH domain binding protein 1 -0.0429238
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0428122
PDIA4 protein disulfide isomerase family A, member 4 -0.0425671
FHIT fragile histidine triad -0.042409
GDF15 growth differentiation factor 15 -0.0420475
RAB1A RAB1A, member RAS oncogene family -0.0417023
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0394733
GPHN gephyrin -0.0392035
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0391444
TRIO trio Rho guanine nucleotide exchange factor -0.03828
SBF2 SET binding factor 2 -0.0378591
POF1B premature ovarian failure, 1B -0.0378384
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0377867
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0375922
PUM2 pumilio RNA-binding family member 2 -0.0367031
HDLBP high density lipoprotein binding protein -0.036657
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0365195
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0360647
CANX calnexin -0.0355808
KDM3A lysine (K)-specific demethylase 3A -0.0354561
ACTG1 actin gamma 1 -0.035389
RRBP1 ribosome binding protein 1 -0.0350033
RPLP1 ribosomal protein, large, P1 -0.0349416
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) -0.0343445
TAS2R14 taste receptor, type 2, member 14 -0.0342094
GREB1L growth regulation by estrogen in breast cancer-like -0.0339901
EXOC4 exocyst complex component 4 -0.0339136
DIAPH3 diaphanous-related formin 3 -0.0334745
HMGB1 high mobility group box 1 -0.0329972
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0326751
ARF1 ADP-ribosylation factor 1 -0.0319785
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.031866
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0316145
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0315492
RIN2 Ras and Rab interactor 2 -0.0315151
AGR2 anterior gradient 2 -0.0314814
DENND1A DENN/MADD domain containing 1A -0.0312581
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0304667
THSD4 thrombospondin, type I, domain containing 4 -0.0298686
YBX1 Y box binding protein 1 -0.0291641
ECT2 epithelial cell transforming 2 -0.0290633
RAD51B RAD51 paralog B -0.0289289
NOP58 NOP58 ribonucleoprotein -0.0286274
UBAP2 ubiquitin associated protein 2 -0.0285829
IARS1 isoleucyl-tRNA synthetase 1 -0.028453
ZNF207 zinc finger protein 207 -0.0283815
SVIL supervillin -0.0282517
LSAMP limbic system-associated membrane protein -0.0282189
MSI2 musashi RNA-binding protein 2 -0.0279553
SERINC5 serine incorporator 5 -0.0278835
PSD3 pleckstrin and Sec7 domain containing 3 -0.027774
TPT1 tumor protein, translationally-controlled 1 -0.0277643
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0277474
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0277304
CLTC clathrin, heavy chain (Hc) -0.0274781
FBXO11 F-box protein 11 -0.0273725
HMGB2 high mobility group box 2 -0.0272944
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0272679
HMGA1 high mobility group AT-hook 1 -0.0272023
FUS FUS RNA binding protein -0.027039
CTBP2 C-terminal binding protein 2 -0.0268737
HDAC2 histone deacetylase 2 -0.0268118
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0264101
MAML2 mastermind-like 2 (Drosophila) -0.0263439
PTPRB protein tyrosine phosphatase, receptor type, B -0.0262381
FMNL2 formin-like 2 -0.0261489
PKP4 plakophilin 4 -0.0260584
RAB10 RAB10, member RAS oncogene family -0.0260508
NSD2 nuclear receptor binding SET domain protein 2 -0.0257498
ANKRD10 ankyrin repeat domain 10 -0.025653
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0256231
PRRC1 proline-rich coiled-coil 1 -0.0253029
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0252742
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 -0.025086
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0250069
TRA2A transformer 2 alpha homolog (Drosophila) -0.0248973
PNISR PNN-interacting serine/arginine-rich protein -0.0248366
VWA8 von Willebrand factor A domain containing 8 -0.024727
LMNA lamin A/C -0.0247078
PPP4R3A protein phosphatase 4 regulatory subunit 3A -0.0246552