PF-06260933_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description PF-06260933 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the PF-06260933_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VEGFA vascular endothelial growth factor A 0.12001
HLA-B major histocompatibility complex, class I, B 0.0953581
CD44 CD44 molecule (Indian blood group) 0.0842193
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0604127
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0578351
FTL ferritin, light polypeptide 0.0505505
LDHA lactate dehydrogenase A 0.0488833
MT2A metallothionein 2A 0.0485096
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0485034
AKAP12 A kinase (PRKA) anchor protein 12 0.0478472
FTH1 ferritin, heavy polypeptide 1 0.0444249
NAMPT nicotinamide phosphoribosyltransferase 0.0444005
HLA-A major histocompatibility complex, class I, A 0.0426261
FN1 fibronectin 1 0.0369185
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0362422
SFTPA2 surfactant protein A2 0.0348487
HDAC9 histone deacetylase 9 0.0335589
SMAD3 SMAD family member 3 0.0331779
MKI67 marker of proliferation Ki-67 0.032313
EXT1 exostosin glycosyltransferase 1 0.0321818
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0320124
KYNU kynureninase 0.0316514
IFI6 interferon, alpha-inducible protein 6 0.0309283
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.030362
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0292006
C3 complement component 3 0.0287601
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.02856
CTSB cathepsin B 0.0280017
HSPA1A heat shock 70kDa protein 1A 0.0275457
STC1 stanniocalcin 1 0.0270769
BASP1 brain abundant, membrane attached signal protein 1 0.0266064
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0261398
EGR1 early growth response 1 0.026057
ZBTB38 zinc finger and BTB domain containing 38 0.0255682
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0253835
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0252556
HSPA8 heat shock 70kDa protein 8 0.0245888
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0243813
RPS6 ribosomal protein S6 0.0236617
ZFP36L1 ZFP36 ring finger protein-like 1 0.0230395
RPS3 ribosomal protein S3 0.0228079
EIF1 eukaryotic translation initiation factor 1 0.0227336
IFITM3 interferon induced transmembrane protein 3 0.022476
SRRM2 serine/arginine repetitive matrix 2 0.0224444
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0223511
B2M beta-2-microglobulin 0.0221285
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.021327
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0212307
SP100 SP100 nuclear antigen 0.0209609
PMP22 peripheral myelin protein 22 0.0202764
OSMR oncostatin M receptor 0.0200822
CENPF centromere protein F, 350/400kDa 0.0198633
PLIN2 perilipin 2 0.0196117
RPS10 ribosomal protein S10 0.0191736
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0188978
RND3 Rho family GTPase 3 0.0188174
IFI16 interferon, gamma-inducible protein 16 0.018759
CDCP1 CUB domain containing protein 1 0.0180963
KIAA1217 KIAA1217 0.0179446
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0179079
ZMYND8 zinc finger, MYND-type containing 8 0.0175277
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0171254
RPL37A ribosomal protein L37a 0.0167984
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0167229
RNF213 ring finger protein 213 0.0166165
NACA nascent polypeptide-associated complex alpha subunit 0.0164591
MBNL1 muscleblind-like splicing regulator 1 0.015903
BTG1 B-cell translocation gene 1, anti-proliferative 0.0158145
ICAM1 intercellular adhesion molecule 1 0.0157878
SOX9 SRY (sex determining region Y)-box 9 0.0157665
OPTN optineurin 0.0156575
IL1RAP interleukin 1 receptor accessory protein 0.0154676
ANKRD28 ankyrin repeat domain 28 0.0154579
BICC1 BicC family RNA binding protein 1 0.0152749
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.015172
RPL9 ribosomal protein L9 0.0150978
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0147806
IGFBP7 insulin-like growth factor binding protein 7 0.0145364
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0144563
MARCKS myristoylated alanine-rich protein kinase C substrate 0.014387
MX1 MX dynamin-like GTPase 1 0.014352
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 0.0140329
TMSB4X thymosin beta 4, X-linked 0.0139815
MAP1B microtubule-associated protein 1B 0.0138261
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0136
IGFBP3 insulin-like growth factor binding protein 3 0.0133374
RPL7A ribosomal protein L7a 0.0133133
INHBA inhibin, beta A 0.0132556
RIGI RNA sensor RIG-I 0.0131374
CUL4B cullin 4B 0.0130694
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0130225
SYNJ2 synaptojanin 2 0.013014
SLC38A1 solute carrier family 38, member 1 0.0127652
RPL36 ribosomal protein L36 0.0127596
SAMD9 sterile alpha motif domain containing 9 0.0126108
ARRDC3 arrestin domain containing 3 0.0125759
CST3 cystatin C 0.0124467
MBNL2 muscleblind-like splicing regulator 2 0.012341
CD68 CD68 molecule 0.0121713
CREB5 cAMP responsive element binding protein 5 0.0121512

decreased expression

Symbol Name Standardized Value
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.143393
SOD2 superoxide dismutase 2, mitochondrial -0.130115
FRMD4A FERM domain containing 4A -0.091564
TRIO trio Rho guanine nucleotide exchange factor -0.0661017
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0653864
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0650816
CANX calnexin -0.062524
PDE10A phosphodiesterase 10A -0.0603478
FRMPD4 FERM and PDZ domain containing 4 -0.0580158
AHNAK AHNAK nucleoprotein -0.0543327
CADM1 cell adhesion molecule 1 -0.0541162
MYH9 myosin, heavy chain 9, non-muscle -0.0536986
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0491526
PCBP2 poly(rC) binding protein 2 -0.0476139
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0475452
ZFAND3 zinc finger, AN1-type domain 3 -0.0465492
CDH13 cadherin 13 -0.0453312
AFF3 AF4/FMR2 family, member 3 -0.0431919
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0389353
OGA O-GlcNAcase -0.0386107
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0379125
TSC22D2 TSC22 domain family, member 2 -0.037876
QKI QKI, KH domain containing, RNA binding -0.03736
KDM3A lysine (K)-specific demethylase 3A -0.0368275
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.036696
SPAG9 sperm associated antigen 9 -0.0354076
FNDC3B fibronectin type III domain containing 3B -0.035057
HELZ helicase with zinc finger -0.0334345
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0320779
UBC ubiquitin C -0.0319111
ZNF292 zinc finger protein 292 -0.0316663
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0311712
GOLGA4 golgin A4 -0.0310904
RPS27A ribosomal protein S27a -0.0307345
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0302664
NAP1L1 nucleosome assembly protein 1-like 1 -0.0302453
VIM vimentin -0.0293722
DIAPH2 diaphanous-related formin 2 -0.0289652
NT5C2 5'-nucleotidase, cytosolic II -0.0285453
SDK1 sidekick cell adhesion molecule 1 -0.0280796
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0279058
DST dystonin -0.0278166
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0264263
COL5A1 collagen, type V, alpha 1 -0.0263236
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0262779
INTS6 integrator complex subunit 6 -0.0259738
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0258647
AFF4 AF4/FMR2 family, member 4 -0.0257742
LCORL ligand dependent nuclear receptor corepressor-like -0.0255942
HMGA2 high mobility group AT-hook 2 -0.0255363
FLNA filamin A, alpha -0.0253843
ZNF207 zinc finger protein 207 -0.0251678
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0250502
SPDYA speedy/RINGO cell cycle regulator family member A -0.0250041
IARS1 isoleucyl-tRNA synthetase 1 -0.0247474
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0245796
WSB1 WD repeat and SOCS box containing 1 -0.0241933
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0232714
MORF4L2 mortality factor 4 like 2 -0.0227502
ERBIN erbb2 interacting protein -0.0227201
TTC3 tetratricopeptide repeat domain 3 -0.0224823
PTMA prothymosin, alpha -0.0218463
RAB1A RAB1A, member RAS oncogene family -0.0216843
MYOF myoferlin -0.021551
RYBP RING1 and YY1 binding protein -0.0215399
FOXO3 forkhead box O3 -0.0215136
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0213794
RBM39 RNA binding motif protein 39 -0.0213435
MMP12 matrix metallopeptidase 12 -0.021158
TMSB10 thymosin beta 10 -0.0210958
ARF4 ADP-ribosylation factor 4 -0.0207086
FAM20C family with sequence similarity 20, member C -0.0205861
ZFC3H1 zinc finger, C3H1-type containing -0.0204165
DLG1 discs, large homolog 1 (Drosophila) -0.0201675
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0201226
RPS24 ribosomal protein S24 -0.0197223
FBXO11 F-box protein 11 -0.0196592
KIF13A kinesin family member 13A -0.0195211
ZCCHC7 zinc finger, CCHC domain containing 7 -0.019455
GARS1 glycyl-tRNA synthetase 1 -0.0193997
PICALM phosphatidylinositol binding clathrin assembly protein -0.0193872
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.0193691
STAG2 stromal antigen 2 -0.0192768
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0190617
MED13 mediator complex subunit 13 -0.0190264
PTPRJ protein tyrosine phosphatase, receptor type, J -0.018986
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -0.0188157
TAOK1 TAO kinase 1 -0.0185605
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0185364
GNAS GNAS complex locus -0.018331
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.018303
PTEN phosphatase and tensin homolog -0.0182785
USP34 ubiquitin specific peptidase 34 -0.018267
KDM4B lysine (K)-specific demethylase 4B -0.0181651
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0179979
KMT2C lysine (K)-specific methyltransferase 2C -0.0179161
PRR16 proline rich 16 -0.0178708
CCBE1 collagen and calcium binding EGF domains 1 -0.017859
IER3 immediate early response 3 -0.0178032
TRA2A transformer 2 alpha homolog (Drosophila) -0.017736