PF-06260933_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description PF-06260933 perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the PF-06260933_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HLA-B major histocompatibility complex, class I, B 0.169815
VEGFA vascular endothelial growth factor A 0.14695
TGFBI transforming growth factor, beta-induced, 68kDa 0.0832533
IL6 interleukin 6 0.077406
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0733657
B2M beta-2-microglobulin 0.066924
CD44 CD44 molecule (Indian blood group) 0.0630707
MT2A metallothionein 2A 0.0625434
EGFR epidermal growth factor receptor 0.0617116
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0564386
COL5A1 collagen, type V, alpha 1 0.0534091
EEF2 eukaryotic translation elongation factor 2 0.0529865
PRELID2 PRELI domain containing 2 0.0495092
CALR calreticulin 0.0479267
IGFBP7 insulin-like growth factor binding protein 7 0.0475183
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0469921
GOLGB1 golgin B1 0.04602
AKAP9 A kinase (PRKA) anchor protein 9 0.0432835
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0425962
PRRC2C proline-rich coiled-coil 2C 0.0374282
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0366885
FLNA filamin A, alpha 0.0366274
INTS6 integrator complex subunit 6 0.0354638
LDHA lactate dehydrogenase A 0.0347296
MBNL1 muscleblind-like splicing regulator 1 0.033723
LOXL2 lysyl oxidase-like 2 0.0324883
OPTN optineurin 0.0320056
MBD5 methyl-CpG binding domain protein 5 0.0319017
ACTG1 actin gamma 1 0.0317767
SRRM2 serine/arginine repetitive matrix 2 0.0315346
CST3 cystatin C 0.0310165
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0305338
FTL ferritin, light polypeptide 0.0300747
KYNU kynureninase 0.0294289
ZSWIM6 zinc finger, SWIM-type containing 6 0.0288863
SAMD4A sterile alpha motif domain containing 4A 0.027728
NCOR2 nuclear receptor corepressor 2 0.0277213
FHIT fragile histidine triad 0.0271777
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0269439
BACE2 beta-site APP-cleaving enzyme 2 0.0266516
BPTF bromodomain PHD finger transcription factor 0.0265527
ZBTB20 zinc finger and BTB domain containing 20 0.0265475
EIF4H eukaryotic translation initiation factor 4H 0.0261067
BASP1 brain abundant, membrane attached signal protein 1 0.025839
GSE1 Gse1 coiled-coil protein 0.025701
ENO1 enolase 1, (alpha) 0.0256924
TMED9 transmembrane emp24 protein transport domain containing 9 0.0254646
APLP2 amyloid beta (A4) precursor-like protein 2 0.0251541
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.0250989
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0250145
CALD1 caldesmon 1 0.0249555
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0247322
ANKRD17 ankyrin repeat domain 17 0.0246584
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0245674
MYO10 myosin X 0.0245254
ARID5B AT rich interactive domain 5B (MRF1-like) 0.024477
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0242901
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0242231
MAML2 mastermind-like 2 (Drosophila) 0.0237683
COL6A2 collagen, type VI, alpha 2 0.0237662
ZCCHC7 zinc finger, CCHC domain containing 7 0.0237267
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 0.0235069
ANO6 anoctamin 6 0.0232286
FTO fat mass and obesity associated 0.0231934
HSPA8 heat shock 70kDa protein 8 0.0229155
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0224922
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0223927
ZMIZ1 zinc finger, MIZ-type containing 1 0.0219125
KMT2C lysine (K)-specific methyltransferase 2C 0.0217524
BBS9 Bardet-Biedl syndrome 9 0.0217467
SEC62 SEC62 homolog (S. cerevisiae) 0.0217126
FAM53C family with sequence similarity 53, member C 0.0216849
DKK3 dickkopf WNT signaling pathway inhibitor 3 0.0216802
GBP2 guanylate binding protein 2, interferon-inducible 0.0216497
MTERF1 mitochondrial transcription termination factor 1 0.0216298
EIF5B eukaryotic translation initiation factor 5B 0.0214334
PDIA6 protein disulfide isomerase family A, member 6 0.0212557
SND1 staphylococcal nuclease and tudor domain containing 1 0.0212042
NUCB2 nucleobindin 2 0.0211843
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3 0.0211765
VEGFC vascular endothelial growth factor C 0.0211235
DSCAM Down syndrome cell adhesion molecule 0.0210724
COL7A1 collagen, type VII, alpha 1 0.0210357
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.0209085
MBNL2 muscleblind-like splicing regulator 2 0.0207301
PLEC plectin 0.0206174
FRMD4A FERM domain containing 4A 0.0205077
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0203733
CSF1 colony stimulating factor 1 (macrophage) 0.0203513
ALK anaplastic lymphoma receptor tyrosine kinase 0.0203019
IL6ST interleukin 6 signal transducer 0.0202895
RPS8 ribosomal protein S8 0.0202656
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0201005
USO1 USO1 vesicle transport factor 0.0200239
PGM3 phosphoglucomutase 3 0.0199891
GLS2 glutaminase 2 (liver, mitochondrial) 0.0198423
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0198334
CSNK1A1 casein kinase 1, alpha 1 0.0197927
JPH2 junctophilin 2 0.0196849
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0196441

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.126842
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0818618
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0779292
COL1A1 collagen, type I, alpha 1 -0.0757772
COL1A2 collagen, type I, alpha 2 -0.071276
LOC112694756 uncharaterized LOC112694756 -0.067923
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0676417
POTEF POTE ankyrin domain family, member F -0.0666697
KMT2E lysine (K)-specific methyltransferase 2E -0.0585548
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0579475
MAP1B microtubule-associated protein 1B -0.0546221
FN1 fibronectin 1 -0.0531306
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0518936
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0511798
NDRG1 N-myc downstream regulated 1 -0.0502132
VIM vimentin -0.0497086
F3 coagulation factor III (thromboplastin, tissue factor) -0.0484988
NAMPT nicotinamide phosphoribosyltransferase -0.0478549
HIP1 huntingtin interacting protein 1 -0.0474094
LOX lysyl oxidase -0.0464247
PGK1 phosphoglycerate kinase 1 -0.0450631
ASPH aspartate beta-hydroxylase -0.0446153
PKM pyruvate kinase, muscle -0.0415855
AHNAK AHNAK nucleoprotein -0.040686
PTMA prothymosin, alpha -0.0402498
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0393153
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0389363
ANLN anillin, actin binding protein -0.0371444
ZNF292 zinc finger protein 292 -0.0364637
SEPTIN7 septin 7 -0.0354312
ANXA2 annexin A2 -0.0349776
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0345232
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0337638
MEF2A myocyte enhancer factor 2A -0.0335583
RYBP RING1 and YY1 binding protein -0.0330808
PFN1 profilin 1 -0.0327709
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.032766
MED13L mediator complex subunit 13-like -0.0327219
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0324397
RBM39 RNA binding motif protein 39 -0.0316673
SPAG9 sperm associated antigen 9 -0.0316667
ATP13A3 ATPase type 13A3 -0.0310529
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0302378
ELL2 elongation factor, RNA polymerase II, 2 -0.0302278
RNF145 ring finger protein 145 -0.0291352
CAV1 caveolin 1, caveolae protein, 22kDa -0.0290976
ITM2B integral membrane protein 2B -0.0289674
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0289155
S100A10 S100 calcium binding protein A10 -0.0288523
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0288037
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.028498
RLF rearranged L-myc fusion -0.0282963
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0280121
NUP58 nucleoporin 58 -0.027998
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0279648
TPM1 tropomyosin 1 (alpha) -0.0279293
CENPF centromere protein F, 350/400kDa -0.027734
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0274398
PRSS23 protease, serine, 23 -0.0271629
RTN4 reticulon 4 -0.0269123
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0268834
WDR45B WD repeat domain 45B -0.0265829
ANKRD11 ankyrin repeat domain 11 -0.0264866
ANXA5 annexin A5 -0.0258972
JMJD1C jumonji domain containing 1C -0.0253551
TRIO trio Rho guanine nucleotide exchange factor -0.0251863
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0241225
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0240398
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0239
TMEM123 transmembrane protein 123 -0.0237984
ACBD3 acyl-CoA binding domain containing 3 -0.0237811
CD109 CD109 molecule -0.0234557
PTBP2 polypyrimidine tract binding protein 2 -0.0226409
ANKRD37 ankyrin repeat domain 37 -0.0222555
XPO1 exportin 1 -0.0222365
RSRC2 arginine/serine-rich coiled-coil 2 -0.022221
GLG1 golgi glycoprotein 1 -0.0222087
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0219953
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0219225
MARCHF6 membrane associated ring-CH-type finger 6 -0.0218166
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0217095
UGCG UDP-glucose ceramide glucosyltransferase -0.0217049
PRRC1 proline-rich coiled-coil 1 -0.021481
CDC27 cell division cycle 27 -0.021376
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0213492
WDFY2 WD repeat and FYVE domain containing 2 -0.0212692
KDM3A lysine (K)-specific demethylase 3A -0.021042
ZNF395 zinc finger protein 395 -0.0208476
KPNB1 karyopherin (importin) beta 1 -0.0207127
PRKCA protein kinase C, alpha -0.0206565
SMC4 structural maintenance of chromosomes 4 -0.0205437
GNAS GNAS complex locus -0.0203503
TFG TRK-fused gene -0.0202328
TAGLN2 transgelin 2 -0.0200989
STRN3 striatin, calmodulin binding protein 3 -0.0200954
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.020023
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0199901
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0199709
PHIP pleckstrin homology domain interacting protein -0.0198869
FAF1 Fas (TNFRSF6) associated factor 1 -0.0197214