PHF12 Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description PHD finger protein 12| (NCBI Entrez Gene Database, 57649)
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Genes

332 genes differentially expressed following the PHF12 gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
SPMIP7 sperm microtubule inner protein 7 3.26067
RNF133 ring finger protein 133 3.26067
FCN3 ficolin (collagen/fibrinogen domain containing) 3 3.26067
IFITM10 interferon induced transmembrane protein 10 3.26067
SPATS1 spermatogenesis associated, serine-rich 1 3.26067
AVP arginine vasopressin 3.26067
MYH13 myosin, heavy chain 13, skeletal muscle 3.26067
GLRA3 glycine receptor, alpha 3 3.26067
CHI3L2 chitinase 3-like 2 3.26067
BSX brain-specific homeobox 3.26067
MUC1 mucin 1, cell surface associated 3.26067
TBC1D26 TBC1 domain family, member 26 3.26067
ASB12 ankyrin repeat and SOCS box containing 12 3.26067
C5AR1 complement component 5a receptor 1 3.26067
SCNN1B sodium channel, non voltage gated 1 beta subunit 3.26067
GDPD3 glycerophosphodiester phosphodiesterase domain containing 3 3.26067
SYT15B synaptotagmin 15B 3.26067
PMP2 peripheral myelin protein 2 3.26067
RAB40A RAB40A, member RAS oncogene family 3.26067
TYR tyrosinase 3.26067
NMBR neuromedin B receptor 3.26067
ASCL1 achaete-scute family bHLH transcription factor 1 3.26067
NLRP3 NLR family, pyrin domain containing 3 3.26067
ADGRE1 adhesion G protein-coupled receptor E1 3.19943
SLC22A11 solute carrier family 22 (organic anion/urate transporter), member 11 3.19943
CCNB3 cyclin B3 3.19943
KLHL35 kelch-like family member 35 3.19943
PDYN prodynorphin 3.19943
CD6 CD6 molecule 3.19943
PGA4 pepsinogen 4, group I (pepsinogen A) 3.19943
KLRK1 killer cell lectin-like receptor subfamily K, member 1 3.19943
COLEC10 collectin sub-family member 10 (C-type lectin) 3.19943
SPOCK2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 3.19943
IGFL2 IGF-like family member 2 3.19943
ROBO4 roundabout, axon guidance receptor, homolog 4 (Drosophila) 3.19943
C8ORF48 chromosome 8 open reading frame 48 3.19943
CES5A carboxylesterase 5A 3.19943
CD3G CD3g molecule, gamma (CD3-TCR complex) 3.19943
SPDEF SAM pointed domain containing ETS transcription factor 3.19943
GPT glutamic-pyruvate transaminase (alanine aminotransferase) 3.19943
MAS1 MAS1 proto-oncogene, G protein-coupled receptor 3.19943
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) 3.19943
RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 3.19943
SSX3 synovial sarcoma, X breakpoint 3 3.19943
CCL5 chemokine (C-C motif) ligand 5 3.19943
MAGED4 melanoma antigen family D4 3.19943
KHDC3L KH domain containing 3-like, subcortical maternal complex member 3.19943
TRIM77 tripartite motif containing 77 3.19943
TRIM74 tripartite motif containing 74 3.19943
NUGGC nuclear GTPase, germinal center associated 3.19943
SSTR4 somatostatin receptor 4 3.19943
PAX3 paired box 3 3.19943
S100A3 S100 calcium binding protein A3 3.19943
AMPD1 adenosine monophosphate deaminase 1 3.19943
TBC1D3I TBC1 domain family member 3I 3.19943
GBP3 guanylate binding protein 3 3.19943
CD300LF CD300 molecule-like family member f 3.19943
GPR35 G protein-coupled receptor 35 3.19943
CADM2 cell adhesion molecule 2 3.19943
MYH6 myosin, heavy chain 6, cardiac muscle, alpha 3.19943
VN1R1 vomeronasal 1 receptor 1 3.19943
VN1R2 vomeronasal 1 receptor 2 3.19943
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 3.19943
SELP selectin P (granule membrane protein 140kDa, antigen CD62) 3.19943
H3-5 H3.5 histone 3.19943
CCN3 cellular communication network factor 3 3.19943
DPEP2NB DPEP2 neighbor 3.19943
LRRC8C-DT LRRC8C divergent transcript 3.19943
TMDD1 transmembrane and death domain 1 3.19943
LHFPL7 LHFPL tetraspan subfamily member 7 3.19943
ARMH2 armadillo like helical domain containing 2 3.19943
TMEM225B transmembrane protein 225B 3.19943
GARIN1A golgi associated RAB2 interactor 1A 3.19943
AJM1 apical junction component 1 homolog 3.19943
ABCC12 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 3.19943
PROZ protein Z, vitamin K-dependent plasma glycoprotein 3.19943
SRPK3 SRSF protein kinase 3 3.19943
MEOX1 mesenchyme homeobox 1 3.19943
ZNF280A zinc finger protein 280A 3.19943
LRTM3 leucine rich repeat transmembrane protein 3 3.19943
H2BC3 H2B clustered histone 3 3.19943
ARL5B ADP-ribosylation factor-like 5B 3.19943
RHOXF2 Rhox homeobox family, member 2 3.19943
OASL 2'-5'-oligoadenylate synthetase-like 3.19943
PCDHA2 protocadherin alpha 2 3.19943
PGC progastricsin (pepsinogen C) 3.19943
CREB3L3 cAMP responsive element binding protein 3-like 3 3.19943
CCR3 chemokine (C-C motif) receptor 3 3.19943
RTL1 retrotransposon-like 1 3.19943
GATA3 GATA binding protein 3 3.19943
RNF183 ring finger protein 183 3.19943
SOAT2 sterol O-acyltransferase 2 3.19943
PTCHD3 patched domain containing 3 3.19943
PGLYRP2 peptidoglycan recognition protein 2 3.19943
TACR2 tachykinin receptor 2 3.19943
CLDN22 claudin 22 3.19943
OR2A1 olfactory receptor, family 2, subfamily A, member 1 3.19943
TCEA3 transcription elongation factor A (SII), 3 3.19943
FCN1 ficolin (collagen/fibrinogen domain containing) 1 3.19943
ZMYND10 zinc finger, MYND-type containing 10 3.19943
RIMS2 regulating synaptic membrane exocytosis 2 3.19943
HUS1B HUS1 checkpoint homolog b (S. pombe) 3.19943
TBC1D21 TBC1 domain family, member 21 3.19943
PRR15L proline rich 15-like 3.19943
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 3.19943
PSKH2 protein serine kinase H2 3.19943
SLC7A4 solute carrier family 7, member 4 3.19943
MAB21L1 mab-21-like 1 (C. elegans) 3.19943
PATE1 prostate and testis expressed 1 3.19943
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle) 3.19943
MSLN mesothelin 3.19943
CLCNKA chloride channel, voltage-sensitive Ka 3.19943
CMTM5 CKLF-like MARVEL transmembrane domain containing 5 3.19943
GLOD5 glyoxalase domain containing 5 3.19943
CNTF ciliary neurotrophic factor 3.19943
KCNK4 potassium channel, two pore domain subfamily K, member 4 3.19943
ERICH4 glutamate-rich 4 3.19943
EDN2 endothelin 2 3.19943
CERKL ceramide kinase-like 3.19943
FNDC9 fibronectin type III domain containing 9 3.19943
ADGRA1 adhesion G protein-coupled receptor A1 3.19943
KLHL1 kelch-like family member 1 3.19943
A3GALT2 alpha 1,3-galactosyltransferase 2 3.19943
ARR3 arrestin 3, retinal (X-arrestin) 3.19943
HHLA2 HERV-H LTR-associating 2 3.19943
CRYBB2 crystallin, beta B2 3.19943
ANKRD66 ankyrin repeat domain 66 3.19943
KCNC2 potassium channel, voltage gated Shaw related subfamily C, member 2 3.19943
FOXN4 forkhead box N4 3.19943
TTC36 tetratricopeptide repeat domain 36 3.19943
TMPRSS15 transmembrane protease, serine 15 3.19943
GPRC5D G protein-coupled receptor, class C, group 5, member D 3.19943
ALDH3A1 aldehyde dehydrogenase 3 family, member A1 3.19943
RAB7B RAB7B, member RAS oncogene family 3.19943
LY6G6D lymphocyte antigen 6 complex, locus G6D 3.19943
LPA lipoprotein, Lp(a) 3.19943
ADCY4 adenylate cyclase 4 3.19943
LMX1B LIM homeobox transcription factor 1, beta 3.19943
MUC7 mucin 7, secreted 3.19943
SLC17A2 solute carrier family 17, member 2 3.19943
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 3.19943
HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 3.19943
C5ORF46 chromosome 5 open reading frame 46 3.19943
DRD5 dopamine receptor D5 3.19943
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 3.19943
AKR7A3 aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) 3.19943
KISS1 KiSS-1 metastasis-suppressor 3.19943
IFITM5 interferon induced transmembrane protein 5 3.19943
PTPN20 protein tyrosine phosphatase, non-receptor type 20 3.19943
PPP1R3G protein phosphatase 1, regulatory subunit 3G 3.19943
TGM3 transglutaminase 3 3.19943
C8ORF89 chromosome 8 open reading frame 89 3.19943
PADI6 peptidyl arginine deiminase, type VI 3.19943
P2RX2 purinergic receptor P2X, ligand gated ion channel, 2 3.19943
CA9 carbonic anhydrase IX 3.15218
AQP5 aquaporin 5 3.05256
HYKK hydroxylysine kinase 3.05256
IL3RA interleukin 3 receptor, alpha (low affinity) 3.05256
TIMELESS timeless circadian clock 3.0372
CALCB calcitonin-related polypeptide beta 2.91677
RNFT1 ring finger protein, transmembrane 1 2.87013
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 2.83716
B3GALT4 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 2.8317
RNF145 ring finger protein 145 2.81011
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 2.73762
SCN9A sodium channel, voltage gated, type IX alpha subunit 2.73762
GBE1 glucan (1,4-alpha-), branching enzyme 1 2.73382
HARBI1 harbinger transposase derived 1 2.68061
STX18 syntaxin 18 2.6769
NPEPPS aminopeptidase puromycin sensitive 2.61355
NUCLEOLIN nucleolin multifunctional protein 2.57088
ZNF770 zinc finger protein 770 2.54929
KIRREL3 kin of IRRE like 3 (Drosophila) 2.53283
FXR2 fragile X mental retardation, autosomal homolog 2 2.51485
GALC galactosylceramidase 2.50364
SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 2.48637
CUEDC1 CUE domain containing 1 2.45584
ADAM20 ADAM metallopeptidase domain 20 2.45162
SENP5 SUMO1/sentrin specific peptidase 5 2.36975
POLR3K polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa 2.36361
NELFCD negative elongation factor complex member C/D 2.36361
PTGER3 prostaglandin E receptor 3 (subtype EP3) 2.36361
TMEM82 transmembrane protein 82 2.36361
ENPEP glutamyl aminopeptidase (aminopeptidase A) 2.34079
ZMAT5 zinc finger, matrin-type 5 2.33327
MCMBP minichromosome maintenance complex binding protein 2.30275
KLF8 Kruppel-like factor 8 2.30275
STX19 syntaxin 19 2.29234
ZNF804A zinc finger protein 804A 2.29234
PCP4L1 Purkinje cell protein 4 like 1 2.29234
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 2.29234
ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 2.29234
RAD9B RAD9 homolog B (S. pombe) 2.29234
CFAP47 cilia and flagella associated protein 47 2.29234
ZNF92 zinc finger protein 92 2.28779
ZBTB2 zinc finger and BTB domain containing 2 2.2714
FERMT1 fermitin family member 1 2.25228
LARP4 La ribonucleoprotein domain family, member 4 2.23201
SNED1 sushi, nidogen and EGF-like domains 1 2.22035
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 2.22035
LIG3 ligase III, DNA, ATP-dependent 2.21449
MRPL16 mitochondrial ribosomal protein L16 2.18378
NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) 2.18345
SP3 Sp3 transcription factor 2.17116
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2 2.16796
MRPS28 mitochondrial ribosomal protein S28 2.15175
ADGRB3 adhesion G protein-coupled receptor B3 2.14304
CXORF38 chromosome X open reading frame 38 2.14304
HDAC5 histone deacetylase 5 2.14178
CPSF3 cleavage and polyadenylation specific factor 3, 73kDa 2.14135
RLIM ring finger protein, LIM domain interacting 2.13403
CSPG4 chondroitin sulfate proteoglycan 4 2.12429
THOC1 THO complex 1 2.11972
NKAIN3 Na+/K+ transporting ATPase interacting 3 2.11972
BCAR1 breast cancer anti-estrogen resistance 1 2.11617
TNS3 tensin 3 2.11617
KBTBD11 kelch repeat and BTB (POZ) domain containing 11 2.09398
GPX8 glutathione peroxidase 8 (putative) 2.08776
NLRP12 NLR family, pyrin domain containing 12 2.07375
ATL3 atlastin GTPase 3 2.06555
EPHB2 EPH receptor B2 2.04575
ACTR3B ARP3 actin-related protein 3 homolog B (yeast) 2.03372
TCF7 transcription factor 7 (T-cell specific, HMG-box) 2.01934
ZNF214 zinc finger protein 214 2.00521
ANGPT2 angiopoietin 2 2.00521

decreased expression

Symbol Name Standardized Value
IFI16 interferon, gamma-inducible protein 16 -3.26067
ZSCAN22 zinc finger and SCAN domain containing 22 -3.26067
CHST13 carbohydrate (chondroitin 4) sulfotransferase 13 -3.19943
KLK13 kallikrein-related peptidase 13 -3.19943
ABCG4 ATP-binding cassette, sub-family G (WHITE), member 4 -3.19943
CLIC2 chloride intracellular channel 2 -3.19943
PTX3 pentraxin 3, long -3.19943
CATSPERD catsper channel auxiliary subunit delta -3.19943
TACSTD2 tumor-associated calcium signal transducer 2 -3.19943
SPATA12 spermatogenesis associated 12 -3.19943
RPL12 ribosomal protein L12 -3.19943
REP15 RAB15 effector protein -3.19943
B4GALT6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 -3.18081
SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A -3.12648
RAMP3 receptor (G protein-coupled) activity modifying protein 3 -3.05256
ALDH8A1 aldehyde dehydrogenase 8 family, member A1 -3.05256
PODN podocan -3.05256
APOL1 apolipoprotein L, 1 -3.05256
TAFA3 TAFA chemokine like family member 3 -3.05256
IER5L immediate early response 5-like -3.05256
GNA15 guanine nucleotide binding protein (G protein), alpha 15 (Gq class) -3.05256
LOC105378220 macrophage receptor MARCO-like -3.05256
CEP295NL CEP295 N-terminal like -3.05256
LRRC61 leucine rich repeat containing 61 -3.05256
TMEM121 transmembrane protein 121 -3.05256
ODAD1 outer dynein arm docking complex subunit 1 -3.05256
XKR3 XK, Kell blood group complex subunit-related family, member 3 -3.05256
ACE2 angiotensin I converting enzyme 2 -3.05256
PCDHA7 protocadherin alpha 7 -3.05256
KLHL31 kelch-like family member 31 -3.05256
TENT5D terminal nucleotidyltransferase 5D -3.05256
LRRC56 leucine rich repeat containing 56 -3.05256
OR56A1 olfactory receptor, family 56, subfamily A, member 1 -3.05256
CNGB3 cyclic nucleotide gated channel beta 3 -3.05256
DAPL1 death associated protein-like 1 -3.05256
TG thyroglobulin -3.05256
CAMK2B calcium/calmodulin-dependent protein kinase II beta -3.05256
C11ORF16 chromosome 11 open reading frame 16 -3.05256
OR52N2 olfactory receptor, family 52, subfamily N, member 2 -3.05256
BHMT betaine--homocysteine S-methyltransferase -3.05256
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha -3.05256
IP6K3 inositol hexakisphosphate kinase 3 -3.05256
ARL9 ADP-ribosylation factor-like 9 -3.03956
TMED2 transmembrane emp24 domain trafficking protein 2 -2.92224
ZNF671 zinc finger protein 671 -2.85769
SPCS1 signal peptidase complex subunit 1 homolog (S. cerevisiae) -2.82833
PLD6 phospholipase D family, member 6 -2.7523
ZNF324 zinc finger protein 324 -2.70523
PODNL1 podocan-like 1 -2.70523
MIPEP mitochondrial intermediate peptidase -2.66424
PDK1 pyruvate dehydrogenase kinase, isozyme 1 -2.64456
CFAP20DC CFAP20 domain containing -2.64456
RTTN rotatin -2.63024
KIFC2 kinesin family member C2 -2.59074
RNF146 ring finger protein 146 -2.58458
SYNDIG1L synapse differentiation inducing 1-like -2.56896
MRPL12 mitochondrial ribosomal protein L12 -2.54505
TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa -2.53802
ARF4 ADP-ribosylation factor 4 -2.5306
PDLIM1 PDZ and LIM domain 1 -2.48637
ATP5PF ATP synthase peripheral stalk subunit F6 -2.47748
CFAP69 cilia and flagella associated protein 69 -2.45162
C1ORF53 chromosome 1 open reading frame 53 -2.45162
PRRT1 proline-rich transmembrane protein 1 -2.45162
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4 -2.41974
PIERCE2 piercer of microtubule wall 2 -2.41974
TDRD7 tudor domain containing 7 -2.41974
BAZ1A bromodomain adjacent to zinc finger domain, 1A -2.37032
CABYR calcium binding tyrosine-(Y)-phosphorylation regulated -2.36676
USHBP1 Usher syndrome 1C binding protein 1 -2.35693
HAUS4 HAUS augmin-like complex, subunit 4 -2.3342
MIEF1 mitochondrial elongation factor 1 -2.33327
EVA1C eva-1 homolog C (C. elegans) -2.32284
LIG4 ligase IV, DNA, ATP-dependent -2.29234
NYNRIN NYN domain and retroviral integrase containing -2.29188
DNAJC24 DnaJ (Hsp40) homolog, subfamily C, member 24 -2.28779
SAMD10 sterile alpha motif domain containing 10 -2.28144
CRIP3 cysteine-rich protein 3 -2.27236
WNT5B wingless-type MMTV integration site family, member 5B -2.2587
C1ORF210 chromosome 1 open reading frame 210 -2.25228
CCNI cyclin I -2.21957
SYNGR2 synaptogyrin 2 -2.20834
GPNMB glycoprotein (transmembrane) nmb -2.20698
RPUSD2 RNA pseudouridylate synthase domain containing 2 -2.19199
UGCG UDP-glucose ceramide glucosyltransferase -2.17508
VDAC3 voltage-dependent anion channel 3 -2.17378
MIA2 melanoma inhibitory activity 2 -2.17116
DSCAML1 Down syndrome cell adhesion molecule like 1 -2.17116
CHMP7 charged multivesicular body protein 7 -2.16215
MEX3D mex-3 RNA binding family member D -2.14851
AMT aminomethyltransferase -2.14337
ZDHHC11B zinc finger, DHHC-type containing 11B -2.14135
ICAM1 intercellular adhesion molecule 1 -2.14135
CISH cytokine inducible SH2-containing protein -2.14135
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -2.13551
CPT1A carnitine palmitoyltransferase 1A (liver) -2.12051
CAV2 caveolin 2 -2.11972
STAT2 signal transducer and activator of transcription 2, 113kDa -2.11972
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase -2.11617
IGF2R insulin-like growth factor 2 receptor -2.09215
HYAL1 hyaluronoglucosaminidase 1 -2.09215
CLASRP CLK4-associating serine/arginine rich protein -2.05398
MIX23 mitochondrial matrix import factor 23 -2.04494
GPR27 G protein-coupled receptor 27 -2.03595
TIMP1 TIMP metallopeptidase inhibitor 1 -2.03069
CFAP418 cilia and flagella associated protein 418 -2.02813
TMEM250 transmembrane protein 250 -2.00905