PHF23 Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description PHD finger protein 23| (NCBI Entrez Gene Database, 79142)
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Genes

324 genes differentially expressed following the PHF23 gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
DTHD1 death domain containing 1 2.59088
AKR7L aldo-keto reductase family 7-like (gene/pseudogene) 2.59088
ZNF491 zinc finger protein 491 2.59088
GPR52 G protein-coupled receptor 52 2.59088
SLC26A4 solute carrier family 26 (anion exchanger), member 4 2.59088
XAF1 XIAP associated factor 1 2.59088
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 2.59088
SYCP2L synaptonemal complex protein 2-like 2.59088
CD19 CD19 molecule 2.59088
CELA3B chymotrypsin-like elastase family, member 3B 2.59088
CDH5 cadherin 5, type 2 (vascular endothelium) 2.59088
PARP3 poly (ADP-ribose) polymerase family, member 3 2.59088
NOTO notochord homeobox 2.59088
CAPN11 calpain 11 2.59088
LIPK lipase, family member K 2.59088
FPR2 formyl peptide receptor 2 2.59088
FAM153A family with sequence similarity 153, member A 2.59088
RAET1E retinoic acid early transcript 1E 2.59088
OVGP1 oviductal glycoprotein 1, 120kDa 2.59088
NCBP2L nuclear cap binding protein subunit 2-like 2.59088
RNF17 ring finger protein 17 2.59088
ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 2.59088
DGAT2L6 diacylglycerol O-acyltransferase 2-like 6 2.59088
GRXCR2 glutaredoxin, cysteine rich 2 2.59088
RGPD8 RANBP2-like and GRIP domain containing 8 2.59088
F2 coagulation factor II (thrombin) 2.59088
DPPA5 developmental pluripotency associated 5 2.59088
NPIPA7 nuclear pore complex interacting protein family, member A7 2.59088
B3GNT8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 2.59088
FAM216B family with sequence similarity 216, member B 2.59088
TAS2R19 taste receptor, type 2, member 19 2.59088
MPL MPL proto-oncogene, thrombopoietin receptor 2.59088
KLLN killin, p53-regulated DNA replication inhibitor 2.59088
OR1L8 olfactory receptor, family 1, subfamily L, member 8 2.59088
CYP4F12 cytochrome P450, family 4, subfamily F, polypeptide 12 2.59088
RFPL3 ret finger protein-like 3 2.59088
TCHH trichohyalin 2.59088
NOD2 nucleotide-binding oligomerization domain containing 2 2.59088
TMEM191B transmembrane protein 191B 2.59088
LRRC56 leucine rich repeat containing 56 2.59088
CSTL1 cystatin-like 1 2.59088
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 2.59088
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 2.59088
C19ORF67 chromosome 19 open reading frame 67 2.59088
SHCBP1L SHC SH2-domain binding protein 1-like 2.59088
REM2 RAS (RAD and GEM)-like GTP binding 2 2.59088
ARL5C ADP-ribosylation factor-like 5C 2.59088
LOC107986837 uncharacterized LOC107986837 2.59088
PNMA8B PNMA family member 8B 2.59088
TLE7 TLE family member 7 2.59088
H2BC1 H2B clustered histone 1 2.59088
BEND2 BEN domain containing 2 2.59088
SPEM1 spermatid maturation 1 2.59088
TBC1D3L TBC1 domain family, member 3L 2.59088
TNFSF8 tumor necrosis factor (ligand) superfamily, member 8 2.59088
ARMCX5-GPRASP2 ARMCX5-GPRASP2 readthrough 2.59088
SMTNL1 smoothelin-like 1 2.59088
ATP5F1E ATP synthase F1 subunit epsilon 2.59088
DNAI7 dynein axonemal intermediate chain 7 2.59088
TMEM270 transmembrane protein 270 2.59088
SLC33A2 solute carrier family 33 member 2 2.59088
SCPPPQ1 secretory calcium-binding phosphoprotein proline-glutamine rich 1 2.59088
FAM90A11 family with sequence similarity 90 member A11 2.59088
FAM240A family with sequence similarity 240 member A 2.59088
CIMAP1B ciliary microtubule associated protein 1B 2.59088
LOC124906010 uncharacterized LOC124906010 2.59088
PVALEF parvalbumin like EF-hand containing 2.59088
CFAP276 cilia and flagella associated protein 276 2.59088
DNAAF6 dynein axonemal assembly factor 6 2.59088
C4ORF50 chromosome 4 open reading frame 50 2.59088
MROH5 maestro heat-like repeat family member 5 2.59088
TBX3 T-box 3 2.59088
DMBX1 diencephalon/mesencephalon homeobox 1 2.59088
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3 2.59088
MSX1 msh homeobox 1 2.59088
LOC124900192 uncharacterized LOC124900192 2.59088
FAM43B family with sequence similarity 43, member B 2.59088
ERVFRD-1 endogenous retrovirus group FRD, member 1 2.59088
NXPE1 neurexophilin and PC-esterase domain family, member 1 2.59088
CLDN9 claudin 9 2.59088
FAM186B family with sequence similarity 186, member B 2.59088
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3 2.59088
CNTFR ciliary neurotrophic factor receptor 2.59088
LTF lactotransferrin 2.59088
LTB lymphotoxin beta (TNF superfamily, member 3) 2.59088
MOV10L1 Mov10 RISC complex RNA helicase like 1 2.59088
GDF6 growth differentiation factor 6 2.59088
GPR83 G protein-coupled receptor 83 2.59088
LRRC73 leucine rich repeat containing 73 2.59088
GPR132 G protein-coupled receptor 132 2.59088
IL7R interleukin 7 receptor 2.59088
OOSP1 oocyte secreted protein 1, pseudogene 2.59088
DEFB1 defensin, beta 1 2.59088
EGR3 early growth response 3 2.59088
TPPP3 tubulin polymerization-promoting protein family member 3 2.59088
CDH17 cadherin 17, LI cadherin (liver-intestine) 2.59088
GPR62 G protein-coupled receptor 62 2.59088
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20 2.59088
OR3A3 olfactory receptor, family 3, subfamily A, member 3 2.59088
IBSP integrin-binding sialoprotein 2.59088
ZMYND12 zinc finger, MYND-type containing 12 2.59088
AGRP agouti related neuropeptide 2.59088
FNDC8 fibronectin type III domain containing 8 2.59088
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22 2.59088
C17ORF107 chromosome 17 open reading frame 107 2.59088
ALOX15B arachidonate 15-lipoxygenase, type B 2.59088
FAM25C family with sequence similarity 25, member C 2.59088
ADIRF adipogenesis regulatory factor 2.59088
PSORS1C1 psoriasis susceptibility 1 candidate 1 2.59088
POTEF POTE ankyrin domain family, member F 2.59088
APOH apolipoprotein H (beta-2-glycoprotein I) 2.59088
SUPT20HL1 suppressor of Ty 20 homolog (S. cerevisiae)-like 1 2.59088
COL9A2 collagen, type IX, alpha 2 2.59088
THBD thrombomodulin 2.59088
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 2.59088
WNT7B wingless-type MMTV integration site family, member 7B 2.59088
C20ORF144 chromosome 20 open reading frame 144 2.59088
URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase 2.59088
SIRPG signal-regulatory protein gamma 2.59088
HUS1B HUS1 checkpoint homolog b (S. pombe) 2.59088
CLEC4D C-type lectin domain family 4, member D 2.59088
AARD alanine and arginine rich domain containing protein 2.59088
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2.59088
PLET1 placenta expressed transcript 1 2.59088
SLC52A1 solute carrier family 52 (riboflavin transporter), member 1 2.59088
AQP8 aquaporin 8 2.59088
DQX1 DEAQ box RNA-dependent ATPase 1 2.59088
POF1B premature ovarian failure, 1B 2.59088
ZNF541 zinc finger protein 541 2.59088
PXT1 peroxisomal, testis specific 1 2.59088
NKX6-3 NK6 homeobox 3 2.59088
GOLGA8R golgin A8 family, member R 2.59088
SLX1B SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) 2.59088
PCDHAC2 protocadherin alpha subfamily C, 2 2.59088
GOLGA8N golgin A8 family, member N 2.59088
ASCL5 achaete-scute family bHLH transcription factor 5 2.59088
C1ORF185 chromosome 1 open reading frame 185 2.59088
SHISA3 shisa family member 3 2.59088
GLRA1 glycine receptor, alpha 1 2.59088
ASCL2 achaete-scute family bHLH transcription factor 2 2.59088
MEPE matrix extracellular phosphoglycoprotein 2.59088
CDCP2 CUB domain containing protein 2 2.59088
TEX35 testis expressed 35 2.59088
TMPRSS13 transmembrane protease, serine 13 2.59088
CCDC177 coiled-coil domain containing 177 2.59088
RAB27A RAB27A, member RAS oncogene family 2.59088
ORM2 orosomucoid 2 2.59088
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene) 2.59088
IL18R1 interleukin 18 receptor 1 2.59088
EPHB3 EPH receptor B3 2.59088
OR6J1 olfactory receptor, family 6, subfamily J, member 1 (gene/pseudogene) 2.59088
RNF224 ring finger protein 224 2.59088
C11ORF42 chromosome 11 open reading frame 42 2.59088
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 2.59088
LAMP3 lysosomal-associated membrane protein 3 2.59088
CD8A CD8a molecule 2.59088
OTP orthopedia homeobox 2.59088
RABL2A RAB, member of RAS oncogene family-like 2A 2.57132
ARL6 ADP-ribosylation factor-like 6 2.54262
BCAP29 B-cell receptor-associated protein 29 2.53795
CFAP70 cilia and flagella associated protein 70 2.50759
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 2.50759
TNS2 tensin 2 2.50759
RBMS1 RNA binding motif, single stranded interacting protein 1 2.49658
CHAF1B chromatin assembly factor 1, subunit B (p60) 2.44689
TIPE3 TNF alpha induced protein 8 like 3 2.39606
STAB1 stabilin 1 2.39339
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 2.39339
RPS27A ribosomal protein S27a 2.39339
CHIT1 chitinase 1 (chitotriosidase) 2.39339
TBCB tubulin folding cofactor B 2.39339
CLASP2 cytoplasmic linker associated protein 2 2.38712
PARG poly (ADP-ribose) glycohydrolase 2.38712
DHPS deoxyhypusine synthase 2.38712
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 2.38712
CD24 CD24 molecule 2.38712
ACTB actin, beta 2.38712
CCDC47 coiled-coil domain containing 47 2.38712
ZNF626 zinc finger protein 626 2.38712
MMP10 matrix metallopeptidase 10 2.3496
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 2.34198
PRDX6 peroxiredoxin 6 2.33311
PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like 2.32926
SLC35C1 solute carrier family 35 (GDP-fucose transporter), member C1 2.3289
MAP7D2 MAP7 domain containing 2 2.32701
ZNF721 zinc finger protein 721 2.32084
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 2.2985
PLEKHM3 pleckstrin homology domain containing, family M, member 3 2.29547
FSCN1 fascin actin-bundling protein 1 2.2881
CD320 CD320 molecule 2.26357
FEN1 flap structure-specific endonuclease 1 2.26357
RPL36A ribosomal protein L36a 2.24883
RAB11FIP3 RAB11 family interacting protein 3 (class II) 2.23901
SAYSD1 SAYSVFN motif domain containing 1 2.23371
PPIA peptidylprolyl isomerase A (cyclophilin A) 2.21399
IVNS1ABP influenza virus NS1A binding protein 2.18299
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 2.18232
HAP1 huntingtin-associated protein 1 2.18232
ALDH1L2 aldehyde dehydrogenase 1 family, member L2 2.18232
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 2.17763
STARD4 StAR-related lipid transfer (START) domain containing 4 2.16995
POLR3G polymerase (RNA) III (DNA directed) polypeptide G (32kD) 2.15724
SNRPF small nuclear ribonucleoprotein polypeptide F 2.14869
COX15 cytochrome c oxidase assembly homolog 15 (yeast) 2.14869
RPL24 ribosomal protein L24 2.12715
CNBP CCHC-type zinc finger, nucleic acid binding protein 2.12294
GRM5 glutamate receptor, metabotropic 5 2.11851
AMD1 adenosylmethionine decarboxylase 1 2.09274
PFN2 profilin 2 2.09274
TMEM200C transmembrane protein 200C 2.09056
ECT2L epithelial cell transforming 2 like 2.09056
SYCP1 synaptonemal complex protein 1 2.09056
ABHD3 abhydrolase domain containing 3 2.07711
PRMT7 protein arginine methyltransferase 7 2.07604
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1 2.05864
GAA glucosidase, alpha; acid 2.04926
BEX3 brain expressed X-linked 3 2.03385
PANK2 pantothenate kinase 2 2.01055
PEX1 peroxisomal biogenesis factor 1 2.00443
SEC61A2 Sec61 alpha 2 subunit (S. cerevisiae) 2.00259

decreased expression

Symbol Name Standardized Value
PLAAT3 phospholipase A and acyltransferase 3 -2.59088
CAMK2G calcium/calmodulin-dependent protein kinase II gamma -2.59088
ZNF230 zinc finger protein 230 -2.59088
PCYT2 phosphate cytidylyltransferase 2, ethanolamine -2.59088
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -2.59088
MMP21 matrix metallopeptidase 21 -2.59088
AASDH aminoadipate-semialdehyde dehydrogenase -2.59088
KLHDC8B kelch domain containing 8B -2.59088
TCEAL1 transcription elongation factor A (SII)-like 1 -2.59088
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2 -2.59088
ELMOD1 ELMO/CED-12 domain containing 1 -2.59088
GLB1L galactosidase, beta 1-like -2.59088
THUMPD2 THUMP domain containing 2 -2.59088
C11ORF52 chromosome 11 open reading frame 52 -2.59088
PALM2AKAP2 PALM2 and AKAP2 fusion -2.59088
KLHL14 kelch-like family member 14 -2.59088
ZNG1A Zn regulated GTPase metalloprotein activator 1A -2.59088
CUX1 cut-like homeobox 1 -2.58846
GPALPP1 GPALPP motifs containing 1 -2.50759
RNF43 ring finger protein 43 -2.44974
WDR11 WD repeat domain 11 -2.4364
CHRNA9 cholinergic receptor, nicotinic, alpha 9 (neuronal) -2.42763
BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3 -2.41202
CARD9 caspase recruitment domain family, member 9 -2.38712
FGF9 fibroblast growth factor 9 -2.38712
FAM161B family with sequence similarity 161, member B -2.38712
ALG10B ALG10B, alpha-1,2-glucosyltransferase -2.38712
RBP4 retinol binding protein 4, plasma -2.38712
FXYD2 FXYD domain containing ion transport regulator 2 -2.38712
ASB12 ankyrin repeat and SOCS box containing 12 -2.38712
GAD1 glutamate decarboxylase 1 (brain, 67kDa) -2.38712
WASF1 WAS protein family, member 1 -2.38712
KLHL35 kelch-like family member 35 -2.38712
HGF hepatocyte growth factor (hepapoietin A; scatter factor) -2.38712
RHOXF2 Rhox homeobox family, member 2 -2.38712
HEPHL1 hephaestin-like 1 -2.38712
WNT3A wingless-type MMTV integration site family, member 3A -2.38712
FPR3 formyl peptide receptor 3 -2.38712
OR2A12 olfactory receptor, family 2, subfamily A, member 12 -2.38712
SFTPB surfactant protein B -2.38712
RNF39 ring finger protein 39 -2.38712
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) -2.38712
SLCO2B1 solute carrier organic anion transporter family, member 2B1 -2.38712
ALAS2 5'-aminolevulinate synthase 2 -2.38712
TMEM190 transmembrane protein 190 -2.38712
LMNTD2 lamin tail domain containing 2 -2.38712
OTOA otoancorin -2.38712
PAGE4 P antigen family, member 4 (prostate associated) -2.38712
ANKRD65 ankyrin repeat domain 65 -2.38712
TSPAN8 tetraspanin 8 -2.38712
CFAP52 cilia and flagella associated protein 52 -2.38712
SLC38A3 solute carrier family 38, member 3 -2.38712
CLNK cytokine-dependent hematopoietic cell linker -2.38712
TSPAN16 tetraspanin 16 -2.38712
RSPH14 radial spoke head 14 homolog (Chlamydomonas) -2.38712
MCAM melanoma cell adhesion molecule -2.38712
C7ORF57 chromosome 7 open reading frame 57 -2.38712
TRPM3 transient receptor potential cation channel, subfamily M, member 3 -2.38712
PSORS1C2 psoriasis susceptibility 1 candidate 2 -2.38712
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 -2.37709
MZT1 mitotic spindle organizing protein 1 -2.36369
SYNPO2L synaptopodin 2-like -2.3496
SERF1B small EDRK-rich factor 1B (centromeric) -2.3496
PARD3B par-3 family cell polarity regulator beta -2.3496
SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A -2.3496
PPID peptidylprolyl isomerase D -2.31373
ZNF740 zinc finger protein 740 -2.27614
FSD1L fibronectin type III and SPRY domain containing 1-like -2.27614
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) -2.26125
CLIP1 CAP-GLY domain containing linker protein 1 -2.22683
CSRNP1 cysteine-serine-rich nuclear protein 1 -2.22074
NHLH2 nescient helix loop helix 2 -2.22074
VPS9D1 VPS9 domain containing 1 -2.2047
GRHL1 grainyhead-like 1 (Drosophila) -2.2047
ZNF8 zinc finger protein 8 -2.20126
SHISA9 shisa family member 9 -2.20019
FAM110D family with sequence similarity 110, member D -2.19702
ANK2 ankyrin 2, neuronal -2.19702
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 -2.19702
TRAK2 trafficking protein, kinesin binding 2 -2.14869
ARHGAP27 Rho GTPase activating protein 27 -2.14869
JHY junctional cadherin complex regulator -2.14869
PCSK7 proprotein convertase subtilisin/kexin type 7 -2.14588
HUNK hormonally up-regulated Neu-associated kinase -2.13729
MSL2 male-specific lethal 2 homolog (Drosophila) -2.13729
BMAL2 basic helix-loop-helix ARNT like 2 -2.13729
IRAK3 interleukin-1 receptor-associated kinase 3 -2.12715
CLDN3 claudin 3 -2.10157
MORN2 MORN repeat containing 2 -2.09274
SPNS1 spinster homolog 1 (Drosophila) -2.08765
FXN frataxin -2.08566
S1PR5 sphingosine-1-phosphate receptor 5 -2.04926
PARD3 par-3 family cell polarity regulator -2.04114
NLGN1 neuroligin 1 -2.03829
ESRRA estrogen-related receptor alpha -2.03829
PYROXD1 pyridine nucleotide-disulphide oxidoreductase domain 1 -2.03767
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -2.03767
ZNF391 zinc finger protein 391 -2.03767
ZNF292 zinc finger protein 292 -2.0351
DEDD death effector domain containing -2.03457
SIGMAR1 sigma non-opioid intracellular receptor 1 -2.02944
OTUD7A OTU deubiquitinase 7A -2.02038
LYRM2 LYR motif containing 2 -2.01395
RAB39B RAB39B, member RAS oncogene family -2.00823