Paclitaxel_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Paclitaxel perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Paclitaxel_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.182528
AREG amphiregulin 0.157774
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.144096
NLGN1 neuroligin 1 0.0925595
PCDH7 protocadherin 7 0.0839482
DST dystonin 0.0835391
BIRC3 baculoviral IAP repeat containing 3 0.0810686
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0655758
HMGA2 high mobility group AT-hook 2 0.0610838
PCBP2 poly(rC) binding protein 2 0.0594926
RTN4 reticulon 4 0.0583249
FTL ferritin, light polypeptide 0.0532012
DENND5A DENN/MADD domain containing 5A 0.0524394
TUBA1B tubulin, alpha 1b 0.0513058
POTEF POTE ankyrin domain family, member F 0.0484133
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0478882
MARCHF4 membrane associated ring-CH-type finger 4 0.0474922
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0464702
TMCC1 transmembrane and coiled-coil domain family 1 0.045171
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0439475
HSPA8 heat shock 70kDa protein 8 0.0434893
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.043143
BRD2 bromodomain containing 2 0.0430537
L3MBTL4 l(3)mbt-like 4 (Drosophila) 0.0427955
DDR2 discoidin domain receptor tyrosine kinase 2 0.0418423
INTS6 integrator complex subunit 6 0.041483
RPS12 ribosomal protein S12 0.040977
CCN2 cellular communication network factor 2 0.0406284
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0403982
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0400907
MACF1 microtubule-actin crosslinking factor 1 0.0395695
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0391808
GJA1 gap junction protein, alpha 1, 43kDa 0.0391739
CELF2 CUGBP, Elav-like family member 2 0.0391681
PPP1R9A protein phosphatase 1, regulatory subunit 9A 0.0390958
PDIA6 protein disulfide isomerase family A, member 6 0.0388873
USP53 ubiquitin specific peptidase 53 0.0387184
MATR3 matrin 3 0.038592
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0381494
YAP1 Yes-associated protein 1 0.0380771
RPL37A ribosomal protein L37a 0.0376913
CPOX coproporphyrinogen oxidase 0.0375996
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0371813
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0370606
DPYD dihydropyrimidine dehydrogenase 0.0367627
SAMD4A sterile alpha motif domain containing 4A 0.036477
RPL9 ribosomal protein L9 0.0362928
KDM2A lysine (K)-specific demethylase 2A 0.0354481
EEF2 eukaryotic translation elongation factor 2 0.0352589
TXNRD1 thioredoxin reductase 1 0.0350748
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0349032
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0344658
CANX calnexin 0.0343636
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0336844
ZSWIM6 zinc finger, SWIM-type containing 6 0.0336089
IPO7 importin 7 0.0333396
EXOC6B exocyst complex component 6B 0.0322622
TUBA1A tubulin, alpha 1a 0.0320593
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0319686
CALR calreticulin 0.0316406
SPATS2 spermatogenesis associated, serine-rich 2 0.0316262
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0313021
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0310165
DTNA dystrobrevin, alpha 0.0307334
RCC1 regulator of chromosome condensation 1 0.0307268
HLA-A major histocompatibility complex, class I, A 0.0301542
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0295504
CCSER1 coiled-coil serine-rich protein 1 0.0294836
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0294202
EDN1 endothelin 1 0.0293551
ZNF407 zinc finger protein 407 0.0290925
XPOT exportin, tRNA 0.0281154
TUBB6 tubulin, beta 6 class V 0.0279858
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0279641
TRIO trio Rho guanine nucleotide exchange factor 0.0276068
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0275932
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0270126
MSRB3 methionine sulfoxide reductase B3 0.0261555
LDHB lactate dehydrogenase B 0.0255622
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0255469
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0254539
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0252681
RPL3 ribosomal protein L3 0.0252035
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0250362
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0248524
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.024817
AHRR aryl-hydrocarbon receptor repressor 0.0247835
RLF rearranged L-myc fusion 0.024673
EIF5 eukaryotic translation initiation factor 5 0.0246608
PICALM phosphatidylinositol binding clathrin assembly protein 0.0246451
SLC39A11 solute carrier family 39, member 11 0.0246045
DENND5B DENN/MADD domain containing 5B 0.0244463
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0241568
USP47 ubiquitin specific peptidase 47 0.024156
PRKCE protein kinase C, epsilon 0.0240968
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0240217
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0239171
RYK receptor-like tyrosine kinase 0.0238891
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0238779
RPS2 ribosomal protein S2 0.023784

decreased expression

Symbol Name Standardized Value
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0934545
VCL vinculin -0.0780082
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0755519
MYL12B myosin, light chain 12B, regulatory -0.0703127
MMP12 matrix metallopeptidase 12 -0.0655095
ADGRG6 adhesion G protein-coupled receptor G6 -0.0584821
EGR1 early growth response 1 -0.056601
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0561948
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0552896
PDE4D phosphodiesterase 4D, cAMP-specific -0.053315
ZNF217 zinc finger protein 217 -0.0522314
BCHE butyrylcholinesterase -0.0485138
ECT2 epithelial cell transforming 2 -0.0484639
TMSB10 thymosin beta 10 -0.047756
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0475877
EDARADD EDAR-associated death domain -0.0468573
H1-0 H1.0 linker histone -0.0465009
TMEM123 transmembrane protein 123 -0.044616
PTMA prothymosin, alpha -0.044259
MTAP methylthioadenosine phosphorylase -0.0441738
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.042728
GARS1 glycyl-tRNA synthetase 1 -0.0423726
EHBP1 EH domain binding protein 1 -0.0421939
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0421202
CXADR coxsackie virus and adenovirus receptor -0.0418416
HDLBP high density lipoprotein binding protein -0.0414523
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0407882
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0388457
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0385032
SLC38A2 solute carrier family 38, member 2 -0.0359888
CDK17 cyclin-dependent kinase 17 -0.0351776
SYT1 synaptotagmin I -0.0342914
JMJD1C jumonji domain containing 1C -0.0342351
AP3S1 adaptor-related protein complex 3, sigma 1 subunit -0.0341237
ATG12 autophagy related 12 -0.0326494
FBXO11 F-box protein 11 -0.0320358
ARL5B ADP-ribosylation factor-like 5B -0.0320269
MGAT4C MGAT4 family, member C -0.0318852
PCNX4 pecanex 4 -0.0314147
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -0.0311679
LARP1 La ribonucleoprotein domain family, member 1 -0.0311379
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0310403
CEP95 centrosomal protein 95kDa -0.0307243
CLTC clathrin, heavy chain (Hc) -0.0306762
OXR1 oxidation resistance 1 -0.0299454
NCEH1 neutral cholesterol ester hydrolase 1 -0.0297409
ELP4 elongator acetyltransferase complex subunit 4 -0.0293762
TSC22D2 TSC22 domain family, member 2 -0.0292311
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0292163
NARS1 asparaginyl-tRNA synthetase 1 -0.0282465
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.028088
NR4A3 nuclear receptor subfamily 4, group A, member 3 -0.0276315
LOC102724023 ES1 protein homolog, mitochondrial -0.0275498
KIF18A kinesin family member 18A -0.027333
DLC1 DLC1 Rho GTPase activating protein -0.0272728
RBL1 retinoblastoma-like 1 -0.0271395
PREPL prolyl endopeptidase-like -0.0269924
SEC31A SEC31 homolog A (S. cerevisiae) -0.0269532
MAPK8 mitogen-activated protein kinase 8 -0.0268072
NAP1L1 nucleosome assembly protein 1-like 1 -0.0266871
KIAA1328 KIAA1328 -0.026474
VMP1 vacuole membrane protein 1 -0.026461
PDE4B phosphodiesterase 4B, cAMP-specific -0.0264096
PTMS parathymosin -0.0263697
KLF6 Kruppel-like factor 6 -0.0261801
RNF128 ring finger protein 128, E3 ubiquitin protein ligase -0.0259633
POU2F1 POU class 2 homeobox 1 -0.0258269
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0257002
SNCA synuclein, alpha (non A4 component of amyloid precursor) -0.0255439
RRM2 ribonucleotide reductase M2 -0.0254905
SMYD3 SET and MYND domain containing 3 -0.0253429
TBC1D32 TBC1 domain family, member 32 -0.0253146
DIAPH3 diaphanous-related formin 3 -0.02525
TMEM41B transmembrane protein 41B -0.0249876
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0249569
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 -0.0249182
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0248857
KDM3A lysine (K)-specific demethylase 3A -0.0245624
NIBAN1 niban apoptosis regulator 1 -0.0245319
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0243581
EPHA5 EPH receptor A5 -0.0243145
BRCA1 breast cancer 1, early onset -0.024166
HSPB1 heat shock 27kDa protein 1 -0.0241332
RAD21 RAD21 homolog (S. pombe) -0.0237482
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0237305
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0235817
STIL SCL/TAL1 interrupting locus -0.0235199
IFIH1 interferon induced with helicase C domain 1 -0.0233326
RAD51B RAD51 paralog B -0.0231169
MARCHF6 membrane associated ring-CH-type finger 6 -0.0230799
ZBTB20 zinc finger and BTB domain containing 20 -0.0224373
GASK1B golgi associated kinase 1B -0.0223033
RPL26 ribosomal protein L26 -0.0222643
PCNP PEST proteolytic signal containing nuclear protein -0.0220165
ATF6 activating transcription factor 6 -0.0215826
RPL6 ribosomal protein L6 -0.0214945
RPL23 ribosomal protein L23 -0.0213226
LOC112694756 uncharaterized LOC112694756 -0.0213151
WASF2 WAS protein family, member 2 -0.0213108
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.021143