Paclitaxel_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Paclitaxel perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Paclitaxel_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.217269
FN1 fibronectin 1 0.175284
CDH13 cadherin 13 0.110294
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0722632
CXCL8 chemokine (C-X-C motif) ligand 8 0.0700143
STC1 stanniocalcin 1 0.0675043
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0606099
HMGA2 high mobility group AT-hook 2 0.0528306
RND3 Rho family GTPase 3 0.0510607
SP100 SP100 nuclear antigen 0.0484033
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0440965
EEF2 eukaryotic translation elongation factor 2 0.043935
RIGI RNA sensor RIG-I 0.0432182
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0426132
CLMP CXADR-like membrane protein 0.0420722
SOD2 superoxide dismutase 2, mitochondrial 0.0384899
MACF1 microtubule-actin crosslinking factor 1 0.0384043
FNIP1 folliculin interacting protein 1 0.0382957
APP amyloid beta (A4) precursor protein 0.0368191
TUBB tubulin, beta class I 0.0358397
IL6ST interleukin 6 signal transducer 0.035311
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0348895
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0319375
ZBTB38 zinc finger and BTB domain containing 38 0.0314914
MYH9 myosin, heavy chain 9, non-muscle 0.0313041
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0311315
BRD2 bromodomain containing 2 0.0304765
JARID2 jumonji, AT rich interactive domain 2 0.0296301
NAV2 neuron navigator 2 0.0292916
PSD3 pleckstrin and Sec7 domain containing 3 0.0292265
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0283721
GOLGB1 golgin B1 0.0282913
CLIC4 chloride intracellular channel 4 0.0282403
HSPA8 heat shock 70kDa protein 8 0.0282369
NALF1 NALCN channel auxiliary factor 1 0.0282022
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0278125
TM4SF1 transmembrane 4 L six family member 1 0.0275125
ANTXR2 anthrax toxin receptor 2 0.0274592
VCL vinculin 0.0274293
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0273103
ANKRD11 ankyrin repeat domain 11 0.0268535
VMP1 vacuole membrane protein 1 0.0266583
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0258363
FBN1 fibrillin 1 0.0254081
PLSCR1 phospholipid scramblase 1 0.024864
COL6A3 collagen, type VI, alpha 3 0.0248422
LPP LIM domain containing preferred translocation partner in lipoma 0.0238512
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0233566
CTSB cathepsin B 0.0228337
PDLIM5 PDZ and LIM domain 5 0.0228077
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0223446
WWTR1 WW domain containing transcription regulator 1 0.0211826
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0206662
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0205798
RSAD2 radical S-adenosyl methionine domain containing 2 0.0205393
HLA-E major histocompatibility complex, class I, E 0.0199419
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0197132
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0194735
HLA-A major histocompatibility complex, class I, A 0.0191924
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0191474
TTC28 tetratricopeptide repeat domain 28 0.0188902
CMIP c-Maf inducing protein 0.0188492
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0185184
IRAK2 interleukin-1 receptor-associated kinase 2 0.0184835
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0184314
NT5E 5'-nucleotidase, ecto (CD73) 0.0183629
XYLT1 xylosyltransferase I 0.0179749
ATL1 atlastin GTPase 1 0.0178916
EFNA5 ephrin-A5 0.0176896
IARS1 isoleucyl-tRNA synthetase 1 0.0175662
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0175127
RPS2 ribosomal protein S2 0.0175073
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0174692
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0173699
IFI44L interferon-induced protein 44-like 0.0173012
PGM3 phosphoglucomutase 3 0.0169981
IFI44 interferon-induced protein 44 0.0169129
ANO10 anoctamin 10 0.0168797
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.016818
ZNF644 zinc finger protein 644 0.0167921
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0167599
TUBB4B tubulin, beta 4B class IVb 0.0167028
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0166242
TRPS1 trichorhinophalangeal syndrome I 0.0165833
ASPH aspartate beta-hydroxylase 0.0165041
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.016438
NRP1 neuropilin 1 0.016327
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0161607
NUMB numb homolog (Drosophila) 0.01616
BTBD9 BTB (POZ) domain containing 9 0.0160677
TAPBP TAP binding protein (tapasin) 0.0160529
CDK13 cyclin-dependent kinase 13 0.0158374
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.015789
SLC22A23 solute carrier family 22, member 23 0.0156926
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0156667
ANKHD1 ankyrin repeat and KH domain containing 1 0.0155218
TRIM22 tripartite motif containing 22 0.0154369
IFIH1 interferon induced with helicase C domain 1 0.0154255
AGO2 argonaute RISC catalytic component 2 0.0152196
YARS1 tyrosyl-tRNA synthetase 1 0.0150493

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.206582
TIMP3 TIMP metallopeptidase inhibitor 3 -0.142258
VIM vimentin -0.137471
NDRG1 N-myc downstream regulated 1 -0.12823
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.123409
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.120506
TMSB10 thymosin beta 10 -0.112453
COL1A1 collagen, type I, alpha 1 -0.0983607
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0859881
MT2A metallothionein 2A -0.0808344
TRIO trio Rho guanine nucleotide exchange factor -0.075908
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0698932
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0648361
IER3 immediate early response 3 -0.0644806
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0636029
PTMA prothymosin, alpha -0.0550875
FTL ferritin, light polypeptide -0.0503417
ZNF292 zinc finger protein 292 -0.0457878
MAP1B microtubule-associated protein 1B -0.0447682
DPYSL3 dihydropyrimidinase-like 3 -0.0447467
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0441617
LGALS1 lectin, galactoside-binding, soluble, 1 -0.043713
S100A9 S100 calcium binding protein A9 -0.0424546
ATP13A3 ATPase type 13A3 -0.0418895
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0404916
MT1X metallothionein 1X -0.0397305
RRBP1 ribosome binding protein 1 -0.0393935
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0383877
TGFBI transforming growth factor, beta-induced, 68kDa -0.0370869
DLG1 discs, large homolog 1 (Drosophila) -0.0358448
ANXA2 annexin A2 -0.0343564
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.034129
QKI QKI, KH domain containing, RNA binding -0.0336818
RUNX1 runt-related transcription factor 1 -0.0322844
RLF rearranged L-myc fusion -0.031118
COL5A1 collagen, type V, alpha 1 -0.030704
S100A10 S100 calcium binding protein A10 -0.0306471
USP3 ubiquitin specific peptidase 3 -0.0305516
TMSB4X thymosin beta 4, X-linked -0.0302248
RPL35A ribosomal protein L35a -0.0301074
PFN1 profilin 1 -0.0295492
PGK1 phosphoglycerate kinase 1 -0.0291823
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0290474
ELL2 elongation factor, RNA polymerase II, 2 -0.0290265
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0280106
LMNA lamin A/C -0.0276856
MBNL1 muscleblind-like splicing regulator 1 -0.0276174
RPL23 ribosomal protein L23 -0.0275938
S100A6 S100 calcium binding protein A6 -0.0272705
RPL8 ribosomal protein L8 -0.0263857
RPS8 ribosomal protein S8 -0.0263355
CD44 CD44 molecule (Indian blood group) -0.0258855
LMAN1 lectin, mannose-binding, 1 -0.0257786
DSTN destrin (actin depolymerizing factor) -0.0257518
ANKRD28 ankyrin repeat domain 28 -0.025678
SMAD3 SMAD family member 3 -0.0253937
RPS19 ribosomal protein S19 -0.0250174
ESYT2 extended synaptotagmin-like protein 2 -0.0248309
EGR1 early growth response 1 -0.0245538
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0240481
MYOF myoferlin -0.0238407
SEPTIN7 septin 7 -0.0238196
SBF2 SET binding factor 2 -0.0237122
RPL18 ribosomal protein L18 -0.0235918
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0232635
ACTN4 actinin, alpha 4 -0.0232441
FAM162A family with sequence similarity 162, member A -0.0230182
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0229084
ALCAM activated leukocyte cell adhesion molecule -0.0222474
ARHGAP29 Rho GTPase activating protein 29 -0.0222304
KLF6 Kruppel-like factor 6 -0.0221922
RPL19 ribosomal protein L19 -0.0220854
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0219702
GOLGA4 golgin A4 -0.0218835
RPL32 ribosomal protein L32 -0.0218089
DPYSL2 dihydropyrimidinase-like 2 -0.0215532
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0212528
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -0.0211759
NPEPPS aminopeptidase puromycin sensitive -0.0210137
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 -0.0202613
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0202519
CAVIN1 caveolae associated protein 1 -0.0202113
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0200021
CAV1 caveolin 1, caveolae protein, 22kDa -0.0198883
WSB1 WD repeat and SOCS box containing 1 -0.019871
RPL12 ribosomal protein L12 -0.0198066
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0197769
TGFB1 transforming growth factor, beta 1 -0.0196786
LOC102724023 ES1 protein homolog, mitochondrial -0.0196479
WASF2 WAS protein family, member 2 -0.019556
B2M beta-2-microglobulin -0.0195062
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0193722
GNAS GNAS complex locus -0.0191372
MLF1 myeloid leukemia factor 1 -0.0190688
NFIX nuclear factor I/X (CCAAT-binding transcription factor) -0.0189939
BBX bobby sox homolog (Drosophila) -0.0189713
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0188878
UGCG UDP-glucose ceramide glucosyltransferase -0.0188286
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0187942
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0187778