Paclitaxel_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Paclitaxel perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Paclitaxel_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0814476
GPHN gephyrin 0.0792585
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0547867
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0530188
IARS1 isoleucyl-tRNA synthetase 1 0.0510011
NEBL nebulette 0.0474469
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0468527
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.046257
EEF2 eukaryotic translation elongation factor 2 0.0435613
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0428611
ANKRD11 ankyrin repeat domain 11 0.0386736
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0351681
HSPA8 heat shock 70kDa protein 8 0.034567
EXT1 exostosin glycosyltransferase 1 0.0331805
EIF3A eukaryotic translation initiation factor 3, subunit A 0.032907
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0317514
PHF3 PHD finger protein 3 0.0310005
GOLGA4 golgin A4 0.0301643
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0299622
TUBB4B tubulin, beta 4B class IVb 0.0297251
CCSER1 coiled-coil serine-rich protein 1 0.0296001
LURAP1L leucine rich adaptor protein 1-like 0.0290147
PUM2 pumilio RNA-binding family member 2 0.0286618
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0283685
FOXP2 forkhead box P2 0.0282109
CADPS2 Ca++-dependent secretion activator 2 0.0280273
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0276506
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0275003
ALCAM activated leukocyte cell adhesion molecule 0.0274936
N4BP2L2 NEDD4 binding protein 2-like 2 0.0273361
RBM39 RNA binding motif protein 39 0.0273161
NCOA7 nuclear receptor coactivator 7 0.0272681
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0270403
PSAT1 phosphoserine aminotransferase 1 0.0268888
FNDC3A fibronectin type III domain containing 3A 0.0264256
CANX calnexin 0.0262606
TRIM2 tripartite motif containing 2 0.0250324
FTH1 ferritin, heavy polypeptide 1 0.0249696
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0248656
WAC WW domain containing adaptor with coiled-coil 0.0247502
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0245775
DSCAM Down syndrome cell adhesion molecule 0.024574
JAK1 Janus kinase 1 0.0244312
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0239526
SAMD12 sterile alpha motif domain containing 12 0.023503
PIGR polymeric immunoglobulin receptor 0.0234747
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.023429
ANKRD17 ankyrin repeat domain 17 0.0234118
AEBP2 AE binding protein 2 0.0232782
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0231102
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0230096
GMDS GDP-mannose 4,6-dehydratase 0.0229069
MLEC malectin 0.022904
OGA O-GlcNAcase 0.0227825
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0224514
ARL15 ADP-ribosylation factor-like 15 0.0223835
KMT2C lysine (K)-specific methyltransferase 2C 0.0222747
CALR calreticulin 0.0220679
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0220557
CEMIP2 cell migration inducing hyaluronidase 2 0.0220192
MECOM MDS1 and EVI1 complex locus 0.0220083
PAPOLA poly(A) polymerase alpha 0.0217561
RPL4 ribosomal protein L4 0.0215296
ZNRF3 zinc and ring finger 3 0.0215216
EPB41 erythrocyte membrane protein band 4.1 0.0213095
CAMKMT calmodulin-lysine N-methyltransferase 0.0212948
CTBP2 C-terminal binding protein 2 0.0212487
FOXP1 forkhead box P1 0.0210706
FNIP1 folliculin interacting protein 1 0.0210693
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0209458
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0208933
XPOT exportin, tRNA 0.0208574
COG5 component of oligomeric golgi complex 5 0.0206131
GARS1 glycyl-tRNA synthetase 1 0.020535
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0203694
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0203437
TOX thymocyte selection-associated high mobility group box 0.020306
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.020253
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0200889
POF1B premature ovarian failure, 1B 0.0200533
RPS2 ribosomal protein S2 0.019925
PTEN phosphatase and tensin homolog 0.0198778
ADGRV1 adhesion G protein-coupled receptor V1 0.0195946
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.0195205
BRD2 bromodomain containing 2 0.0194948
SMAD2 SMAD family member 2 0.0193935
RAB1A RAB1A, member RAS oncogene family 0.0193637
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta 0.0192211
ANKHD1 ankyrin repeat and KH domain containing 1 0.0191001
SQSTM1 sequestosome 1 0.0190903
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 0.0190339
TPR translocated promoter region, nuclear basket protein 0.0189504
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0189407
GOLGB1 golgin B1 0.0188763
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0187475
ESRP1 epithelial splicing regulatory protein 1 0.0185689
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.018555
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0185123
JMY junction mediating and regulatory protein, p53 cofactor 0.0185086
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0183438

decreased expression

Symbol Name Standardized Value
ASPH aspartate beta-hydroxylase -0.131837
FLNB filamin B, beta -0.131193
NPSR1 neuropeptide S receptor 1 -0.13044
TMSB10 thymosin beta 10 -0.129625
EZR ezrin -0.117399
ANXA2 annexin A2 -0.110613
GREB1L growth regulation by estrogen in breast cancer-like -0.103069
PTMA prothymosin, alpha -0.100322
MUC6 mucin 6, oligomeric mucus/gel-forming -0.096141
ANTXR2 anthrax toxin receptor 2 -0.0929058
KRT18 keratin 18, type I -0.0927599
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0905471
TPM4 tropomyosin 4 -0.0821738
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0814271
ITGA6 integrin, alpha 6 -0.0783605
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0760517
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0685049
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0659627
KRT8 keratin 8, type II -0.0645915
LMO7 LIM domain 7 -0.0621171
LAMA4 laminin, alpha 4 -0.0616686
S100A6 S100 calcium binding protein A6 -0.0615791
PSD3 pleckstrin and Sec7 domain containing 3 -0.0612809
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0612192
FAT1 FAT atypical cadherin 1 -0.0607032
ACTN4 actinin, alpha 4 -0.0583438
ONECUT3 one cut homeobox 3 -0.057942
ESYT2 extended synaptotagmin-like protein 2 -0.0578729
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0552998
CALB1 calbindin 1, 28kDa -0.0548105
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0535694
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0517479
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0516327
TNS4 tensin 4 -0.0512818
CEMIP cell migration inducing protein, hyaluronan binding -0.0508302
ACTG1 actin gamma 1 -0.0498229
RNF217 ring finger protein 217 -0.0494936
NDRG1 N-myc downstream regulated 1 -0.04924
EMP1 epithelial membrane protein 1 -0.0490955
MAML2 mastermind-like 2 (Drosophila) -0.0489711
KRT19 keratin 19, type I -0.0473178
S100A10 S100 calcium binding protein A10 -0.0470038
POTEF POTE ankyrin domain family, member F -0.0466698
FERMT1 fermitin family member 1 -0.0451734
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0451029
MT2A metallothionein 2A -0.0450086
SLC35F3 solute carrier family 35, member F3 -0.0445072
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0443318
ITGB4 integrin, beta 4 -0.0442053
MUC17 mucin 17, cell surface associated -0.0427271
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.042555
EGFR epidermal growth factor receptor -0.0419219
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 -0.0417574
PRSS3 protease, serine, 3 -0.0413661
LAMC2 laminin, gamma 2 -0.0411572
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.040968
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0408451
NALF1 NALCN channel auxiliary factor 1 -0.0399976
ITPRID2 ITPR interacting domain containing 2 -0.0390653
CDCP1 CUB domain containing protein 1 -0.0388643
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) -0.0386455
EHBP1 EH domain binding protein 1 -0.03864
FOSL1 FOS-like antigen 1 -0.0383578
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0381337
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0380601
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0372316
SVIL supervillin -0.0359696
PTPRR protein tyrosine phosphatase, receptor type, R -0.035005
SH3D19 SH3 domain containing 19 -0.0349412
LMNA lamin A/C -0.0348831
HMGA1 high mobility group AT-hook 1 -0.0348045
SOX4 SRY (sex determining region Y)-box 4 -0.0345124
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0344966
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.034165
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0338017
PGK1 phosphoglycerate kinase 1 -0.0337967
RAP1B RAP1B, member of RAS oncogene family -0.0332625
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0328592
KLK10 kallikrein-related peptidase 10 -0.0328267
AFF1 AF4/FMR2 family, member 1 -0.0326936
F3 coagulation factor III (thromboplastin, tissue factor) -0.0323709
AHNAK AHNAK nucleoprotein -0.0315385
MPRIP myosin phosphatase Rho interacting protein -0.0310723
RPS19 ribosomal protein S19 -0.030949
MACF1 microtubule-actin crosslinking factor 1 -0.0307276
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.0302517
DSPP dentin sialophosphoprotein -0.0299321
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0291455
DIAPH1 diaphanous-related formin 1 -0.029104
ANXA1 annexin A1 -0.0290646
PERP PERP, TP53 apoptosis effector -0.029047
PKM pyruvate kinase, muscle -0.0287839
RCOR1 REST corepressor 1 -0.0283608
TFF1 trefoil factor 1 -0.0283005
PPARG peroxisome proliferator-activated receptor gamma -0.0282858
RPS6 ribosomal protein S6 -0.028182
H1-0 H1.0 linker histone -0.0277762
GLS2 glutaminase 2 (liver, mitochondrial) -0.0274799
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.027376
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0273508