Paclitaxel_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Paclitaxel perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Paclitaxel_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.081969
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0787243
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0773857
AGO2 argonaute RISC catalytic component 2 0.0759324
PM20D1 peptidase M20 domain containing 1 0.073114
SPAG9 sperm associated antigen 9 0.0727855
TOP1 topoisomerase (DNA) I 0.0710256
MCTP1 multiple C2 domains, transmembrane 1 0.0622761
USP34 ubiquitin specific peptidase 34 0.0582345
RICTOR RPTOR independent companion of MTOR, complex 2 0.0574055
MCL1 myeloid cell leukemia 1 0.0565836
PCBP2 poly(rC) binding protein 2 0.0544714
MKI67 marker of proliferation Ki-67 0.0534231
BRD2 bromodomain containing 2 0.0526721
EEF2 eukaryotic translation elongation factor 2 0.0524791
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0508799
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0499003
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0488202
VMP1 vacuole membrane protein 1 0.0486401
PDIA3 protein disulfide isomerase family A, member 3 0.0483175
HYOU1 hypoxia up-regulated 1 0.0466496
CANX calnexin 0.0464931
SLTM SAFB-like, transcription modulator 0.0459657
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0432713
NPTN neuroplastin 0.0431914
TMEM165 transmembrane protein 165 0.0430555
FAT1 FAT atypical cadherin 1 0.0418636
FTH1 ferritin, heavy polypeptide 1 0.0412677
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0402324
CXCL8 chemokine (C-X-C motif) ligand 8 0.0400374
CCNL1 cyclin L1 0.0392877
DOCK5 dedicator of cytokinesis 5 0.0391926
GOLGA4 golgin A4 0.0385104
NAMPT nicotinamide phosphoribosyltransferase 0.0382086
LRP12 low density lipoprotein receptor-related protein 12 0.037781
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0375525
PRRC2C proline-rich coiled-coil 2C 0.0366468
SEC31A SEC31 homolog A (S. cerevisiae) 0.0366391
NSUN6 NOP2/Sun domain family, member 6 0.0366347
PKM pyruvate kinase, muscle 0.0356253
BRWD1 bromodomain and WD repeat domain containing 1 0.0348746
TRIP12 thyroid hormone receptor interactor 12 0.0346209
RAB7A RAB7A, member RAS oncogene family 0.0346023
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0343478
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 0.0338677
FNIP1 folliculin interacting protein 1 0.0338456
RAB1A RAB1A, member RAS oncogene family 0.0338108
DSCAM Down syndrome cell adhesion molecule 0.0327419
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0321829
ANKHD1 ankyrin repeat and KH domain containing 1 0.0319486
HSPA8 heat shock 70kDa protein 8 0.031866
CPE carboxypeptidase E 0.0318303
ELL2 elongation factor, RNA polymerase II, 2 0.0318102
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0317833
KMT2E lysine (K)-specific methyltransferase 2E 0.0316705
TJP1 tight junction protein 1 0.031663
GSK3B glycogen synthase kinase 3 beta 0.0309731
TUBB4B tubulin, beta 4B class IVb 0.0308673
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0305112
TXNRD1 thioredoxin reductase 1 0.0303434
TUBA1C tubulin, alpha 1c 0.0301235
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0300168
CAMTA1 calmodulin binding transcription activator 1 0.0300068
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0299603
AKAP9 A kinase (PRKA) anchor protein 9 0.029626
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0288953
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0288039
PUM2 pumilio RNA-binding family member 2 0.0287944
YTHDC1 YTH domain containing 1 0.0287339
BLZF1 basic leucine zipper nuclear factor 1 0.0286608
KDM6A lysine (K)-specific demethylase 6A 0.028635
PAPOLA poly(A) polymerase alpha 0.0285218
RUNX1 runt-related transcription factor 1 0.0285167
SRRM2 serine/arginine repetitive matrix 2 0.0283461
NGLY1 N-glycanase 1 0.02818
RBM39 RNA binding motif protein 39 0.0279465
EXT1 exostosin glycosyltransferase 1 0.0278536
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0273085
RTN4 reticulon 4 0.0272294
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0270539
ANXA5 annexin A5 0.0270083
UBA6 ubiquitin-like modifier activating enzyme 6 0.0269744
XRRA1 X-ray radiation resistance associated 1 0.0269286
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0268358
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0268243
SLC35F5 solute carrier family 35, member F5 0.0268142
COPA coatomer protein complex, subunit alpha 0.0263694
RNF145 ring finger protein 145 0.0261596
EXOC6B exocyst complex component 6B 0.0260806
CD163L1 CD163 molecule-like 1 0.0258515
POTEF POTE ankyrin domain family, member F 0.025839
SRP54 signal recognition particle 54kDa 0.0257441
LGALS12 lectin, galactoside-binding, soluble, 12 0.0257405
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0255465
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0253855
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) 0.0252766
PDIA6 protein disulfide isomerase family A, member 6 0.0249486
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0248768
EIF1 eukaryotic translation initiation factor 1 0.0248294
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0247713

decreased expression

Symbol Name Standardized Value
ASPH aspartate beta-hydroxylase -0.17089
LMO7 LIM domain 7 -0.131468
THSD4 thrombospondin, type I, domain containing 4 -0.131212
EGFR epidermal growth factor receptor -0.107797
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.09062
AHNAK AHNAK nucleoprotein -0.0866109
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0801616
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0747846
CAV1 caveolin 1, caveolae protein, 22kDa -0.07019
LAMC2 laminin, gamma 2 -0.06835
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0668904
S100A10 S100 calcium binding protein A10 -0.0656693
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0640211
H1-0 H1.0 linker histone -0.0607798
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0606755
MYOF myoferlin -0.0587175
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0584808
GRAMD1B GRAM domain containing 1B -0.0557616
EFNA5 ephrin-A5 -0.0549145
MYO1E myosin IE -0.0532631
TMSB10 thymosin beta 10 -0.0514466
PTPRM protein tyrosine phosphatase, receptor type, M -0.0504635
ZMYND8 zinc finger, MYND-type containing 8 -0.0450273
BZW1 basic leucine zipper and W2 domains 1 -0.0443459
CP ceruloplasmin (ferroxidase) -0.0442321
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0442234
LOC112694756 uncharaterized LOC112694756 -0.0402733
LPP LIM domain containing preferred translocation partner in lipoma -0.040232
OSMR oncostatin M receptor -0.0388862
AHNAK2 AHNAK nucleoprotein 2 -0.038791
AKAP12 A kinase (PRKA) anchor protein 12 -0.0380459
LDHA lactate dehydrogenase A -0.0358502
RNF213 ring finger protein 213 -0.0355947
MYO1D myosin ID -0.0355067
SLC38A1 solute carrier family 38, member 1 -0.0347287
DSG2 desmoglein 2 -0.0345554
GM2A GM2 ganglioside activator -0.0342912
KRT18 keratin 18, type I -0.0338398
ANKRD12 ankyrin repeat domain 12 -0.0338029
DSPP dentin sialophosphoprotein -0.0333296
SCEL sciellin -0.0321666
ANXA2 annexin A2 -0.031649
LAMB3 laminin, beta 3 -0.0312971
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.030288
ACTG1 actin gamma 1 -0.0302711
INTS6 integrator complex subunit 6 -0.0299048
MCU mitochondrial calcium uniporter -0.0298428
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0290939
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0287246
FLNB filamin B, beta -0.028724
FOXP1 forkhead box P1 -0.0285358
IFI6 interferon, alpha-inducible protein 6 -0.0278741
TNS3 tensin 3 -0.0277155
USP53 ubiquitin specific peptidase 53 -0.0275982
RPL34 ribosomal protein L34 -0.0275039
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0274528
RPS24 ribosomal protein S24 -0.0274447
PDLIM5 PDZ and LIM domain 5 -0.0265017
KLF5 Kruppel-like factor 5 (intestinal) -0.0264149
CUX1 cut-like homeobox 1 -0.0261374
PSD3 pleckstrin and Sec7 domain containing 3 -0.0258982
NRIP1 nuclear receptor interacting protein 1 -0.0243279
MAML2 mastermind-like 2 (Drosophila) -0.0241769
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0240992
KRT7 keratin 7, type II -0.0239145
IGFBP5 insulin-like growth factor binding protein 5 -0.023645
PATJ PATJ crumbs cell polarity complex component -0.023276
LRP1B low density lipoprotein receptor-related protein 1B -0.0230091
CMIP c-Maf inducing protein -0.0227913
LIMCH1 LIM and calponin homology domains 1 -0.02271
ANXA1 annexin A1 -0.0225037
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0224707
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0219781
MACF1 microtubule-actin crosslinking factor 1 -0.0215575
NCOA7 nuclear receptor coactivator 7 -0.0214094
FAM107B family with sequence similarity 107, member B -0.0212631
IGF1R insulin-like growth factor 1 receptor -0.0212123
HLA-B major histocompatibility complex, class I, B -0.0207512
TRIO trio Rho guanine nucleotide exchange factor -0.0206609
APP amyloid beta (A4) precursor protein -0.0204138
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0202738
ADGRF1 adhesion G protein-coupled receptor F1 -0.0200665
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0199742
S100A6 S100 calcium binding protein A6 -0.0198507
GNAS GNAS complex locus -0.019782
AGR2 anterior gradient 2 -0.0197633
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.019732
SMAD3 SMAD family member 3 -0.0196844
PYGL phosphorylase, glycogen, liver -0.019546
SBF2 SET binding factor 2 -0.0195351
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0195213
MAML3 mastermind-like 3 (Drosophila) -0.0194666
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 -0.0192476
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0189581
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0186968
ZNF185 zinc finger protein 185 (LIM domain) -0.0181857
EHBP1 EH domain binding protein 1 -0.0180252
TRIM56 tripartite motif containing 56 -0.0178722
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0176285
ITGA6 integrin, alpha 6 -0.0170223