Paclitaxel_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Paclitaxel perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Paclitaxel_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FNDC3B fibronectin type III domain containing 3B 0.117088
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0694397
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0665268
KYNU kynureninase 0.0614618
NAMPT nicotinamide phosphoribosyltransferase 0.0549999
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0461186
SOD2 superoxide dismutase 2, mitochondrial 0.0440415
ZEB2 zinc finger E-box binding homeobox 2 0.0437863
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0400535
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0400304
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0362336
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0335799
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0326789
NPC1 Niemann-Pick disease, type C1 0.0307279
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.0302912
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0302051
SAMD4A sterile alpha motif domain containing 4A 0.0281579
STK38L serine/threonine kinase 38 like 0.0280326
PELI1 pellino E3 ubiquitin protein ligase 1 0.0276195
OSMR oncostatin M receptor 0.0276164
MX1 MX dynamin-like GTPase 1 0.0274971
AHR aryl hydrocarbon receptor 0.0266643
RAB27B RAB27B, member RAS oncogene family 0.0263082
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0246624
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0245795
HDAC9 histone deacetylase 9 0.0243192
CD44 CD44 molecule (Indian blood group) 0.0242336
VMP1 vacuole membrane protein 1 0.0238042
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0234404
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0233668
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0233414
PRKCSH protein kinase C substrate 80K-H 0.0229776
TBC1D5 TBC1 domain family, member 5 0.0227386
FRMD4A FERM domain containing 4A 0.0227379
KSR1 kinase suppressor of ras 1 0.0222698
RB1CC1 RB1-inducible coiled-coil 1 0.0220629
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.0215854
EEF2 eukaryotic translation elongation factor 2 0.0215792
ELL2 elongation factor, RNA polymerase II, 2 0.0215335
PCBP2 poly(rC) binding protein 2 0.0214075
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0208374
ZBTB20 zinc finger and BTB domain containing 20 0.0208235
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0206284
TGM2 transglutaminase 2 0.0204858
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0202636
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0191359
PLSCR1 phospholipid scramblase 1 0.0190084
TBK1 TANK-binding kinase 1 0.0189846
CCSER1 coiled-coil serine-rich protein 1 0.0188718
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0187099
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0186225
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0185968
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0182958
ARHGAP42 Rho GTPase activating protein 42 0.0182129
METTL15 methyltransferase like 15 0.0180214
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0179829
NAV2 neuron navigator 2 0.0177517
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0176282
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0174305
ADD3 adducin 3 (gamma) 0.0173484
WDPCP WD repeat containing planar cell polarity effector 0.0172408
OPTN optineurin 0.0171398
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0171005
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0170736
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0168479
SMAD3 SMAD family member 3 0.0168428
IL1R1 interleukin 1 receptor, type I 0.0167515
BABAM2 BRISC and BRCA1 A complex member 2 0.0166658
LRRC49 leucine rich repeat containing 49 0.0165717
TENT5A terminal nucleotidyltransferase 5A 0.0162661
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0162013
KIAA1217 KIAA1217 0.016185
SPRED1 sprouty-related, EVH1 domain containing 1 0.0160151
CDCP1 CUB domain containing protein 1 0.0159059
PTPRR protein tyrosine phosphatase, receptor type, R 0.0157516
MBNL2 muscleblind-like splicing regulator 2 0.0155743
IL6ST interleukin 6 signal transducer 0.0154234
RNF24 ring finger protein 24 0.0153311
FHIT fragile histidine triad 0.0151842
SAMD9 sterile alpha motif domain containing 9 0.015182
WWOX WW domain containing oxidoreductase 0.0151554
PRELID2 PRELI domain containing 2 0.015082
GBP2 guanylate binding protein 2, interferon-inducible 0.0150205
RPL3 ribosomal protein L3 0.0149093
RUNX2 runt-related transcription factor 2 0.0148465
LNPEP leucyl/cystinyl aminopeptidase 0.0147159
AGFG1 ArfGAP with FG repeats 1 0.0146718
IFIH1 interferon induced with helicase C domain 1 0.0146465
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0146425
EXT1 exostosin glycosyltransferase 1 0.0145462
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0144619
RARB retinoic acid receptor, beta 0.0144322
RAD51B RAD51 paralog B 0.0143938
SMYD3 SET and MYND domain containing 3 0.0143903
FAM3C family with sequence similarity 3, member C 0.0143776
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0143516
LGALS12 lectin, galactoside-binding, soluble, 12 0.0142619
MSN moesin 0.0142108
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0140878
SPIDR scaffolding protein involved in DNA repair 0.0139077

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.160925
TMSB10 thymosin beta 10 -0.153882
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.149815
CDH13 cadherin 13 -0.147364
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.138226
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.134965
HMGA2 high mobility group AT-hook 2 -0.106567
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.102266
SDK1 sidekick cell adhesion molecule 1 -0.0995644
FTL ferritin, light polypeptide -0.0986863
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.084437
MTSS1 metastasis suppressor 1 -0.0812153
GRB10 growth factor receptor-bound protein 10 -0.0810453
PTMA prothymosin, alpha -0.0795887
FN1 fibronectin 1 -0.0773393
PDE4D phosphodiesterase 4D, cAMP-specific -0.0735773
STC1 stanniocalcin 1 -0.0681192
RPLP1 ribosomal protein, large, P1 -0.0637121
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.0634135
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0622987
TFPI2 tissue factor pathway inhibitor 2 -0.0617864
RAB1A RAB1A, member RAS oncogene family -0.0606767
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0587386
NRG1 neuregulin 1 -0.0577401
IER3 immediate early response 3 -0.0554111
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0536345
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0512208
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0479336
S100A6 S100 calcium binding protein A6 -0.0475111
RPS19 ribosomal protein S19 -0.0459272
MACF1 microtubule-actin crosslinking factor 1 -0.0458434
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0455957
EIF1 eukaryotic translation initiation factor 1 -0.0451294
GOLGA4 golgin A4 -0.0448304
KDM3A lysine (K)-specific demethylase 3A -0.0441866
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0441325
FBN1 fibrillin 1 -0.0428362
COL7A1 collagen, type VII, alpha 1 -0.042555
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0425291
ANKRD28 ankyrin repeat domain 28 -0.0408635
IGFBP3 insulin-like growth factor binding protein 3 -0.0406171
RPL35A ribosomal protein L35a -0.0400443
RPL34 ribosomal protein L34 -0.0392306
BASP1 brain abundant, membrane attached signal protein 1 -0.038866
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0385009
SEC31A SEC31 homolog A (S. cerevisiae) -0.0382429
GNAS GNAS complex locus -0.0381948
RPL32 ribosomal protein L32 -0.0381571
NAP1L1 nucleosome assembly protein 1-like 1 -0.0381245
TTC3 tetratricopeptide repeat domain 3 -0.0378193
AADAC arylacetamide deacetylase -0.0377252
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0375244
LOC102724023 ES1 protein homolog, mitochondrial -0.0375022
MEF2A myocyte enhancer factor 2A -0.0373553
S100A10 S100 calcium binding protein A10 -0.0370488
PSD3 pleckstrin and Sec7 domain containing 3 -0.0370343
RPS8 ribosomal protein S8 -0.0364366
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0364177
MT2A metallothionein 2A -0.0363876
TPT1 tumor protein, translationally-controlled 1 -0.0361395
RIOK3 RIO kinase 3 -0.0358616
PDGFA platelet-derived growth factor alpha polypeptide -0.0357947
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0357074
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0355909
RBM39 RNA binding motif protein 39 -0.0354057
RPS29 ribosomal protein S29 -0.0353508
MAML3 mastermind-like 3 (Drosophila) -0.0351472
RPL23 ribosomal protein L23 -0.0351019
HDLBP high density lipoprotein binding protein -0.0350142
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0349361
RPS21 ribosomal protein S21 -0.0348542
MSRB3 methionine sulfoxide reductase B3 -0.0348139
FAM20C family with sequence similarity 20, member C -0.0348048
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0344232
DDIT3 DNA-damage-inducible transcript 3 -0.0344055
CALU calumenin -0.0343964
USP34 ubiquitin specific peptidase 34 -0.0342512
EGR1 early growth response 1 -0.0341998
CDK14 cyclin-dependent kinase 14 -0.0334706
ANTXR2 anthrax toxin receptor 2 -0.0332719
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0325843
TMSB4X thymosin beta 4, X-linked -0.0325707
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.032275
TGFB1 transforming growth factor, beta 1 -0.031966
NPAS2 neuronal PAS domain protein 2 -0.0316259
RAB7A RAB7A, member RAS oncogene family -0.031288
FAM107B family with sequence similarity 107, member B -0.0311737
RPS24 ribosomal protein S24 -0.0311148
TMTC1 transmembrane and tetratricopeptide repeat containing 1 -0.0307519
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0305051
ANKRD11 ankyrin repeat domain 11 -0.0302113
RPLP2 ribosomal protein, large, P2 -0.0300119
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0299664
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0298594
TMEM263 transmembrane protein 263 -0.0296146
DPYD dihydropyrimidine dehydrogenase -0.029524
RPLP0 ribosomal protein, large, P0 -0.0289925
JARID2 jumonji, AT rich interactive domain 2 -0.028893
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0287152
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0287124