Paclitaxel_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Paclitaxel perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Paclitaxel_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.05292
SMOC1 SPARC related modular calcium binding 1 0.0136648
DSCAM Down syndrome cell adhesion molecule 0.0108739
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0107211
SPAG9 sperm associated antigen 9 0.0101622
NTN4 netrin 4 0.00948501
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.00921688
CNOT1 CCR4-NOT transcription complex, subunit 1 0.00904768
HSPA8 heat shock 70kDa protein 8 0.0085688
NAMPT nicotinamide phosphoribosyltransferase 0.00794042
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.00780698
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.00762135
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.00751941
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.00744432
PHF3 PHD finger protein 3 0.00728034
KYNU kynureninase 0.00705109
FBXL20 F-box and leucine-rich repeat protein 20 0.00696301
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.00693656
FGA fibrinogen alpha chain 0.00682509
MATR3 matrin 3 0.00674178
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.00672366
KDM3A lysine (K)-specific demethylase 3A 0.00667969
NEK7 NIMA-related kinase 7 0.00665159
IFRD1 interferon-related developmental regulator 1 0.0066
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.00658843
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0063648
SYNE2 spectrin repeat containing, nuclear envelope 2 0.00632701
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.00628411
ZSWIM6 zinc finger, SWIM-type containing 6 0.00586893
RPL4 ribosomal protein L4 0.00567801
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0056534
PUM2 pumilio RNA-binding family member 2 0.0052834
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.00527198
TUBB4B tubulin, beta 4B class IVb 0.00525093
TUBB tubulin, beta class I 0.0051873
TRA2A transformer 2 alpha homolog (Drosophila) 0.00504368
RPL3 ribosomal protein L3 0.00499502
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.00489723
AURKA aurora kinase A 0.00472402
KANSL1L KAT8 regulatory NSL complex subunit 1-like 0.00464901
TXNDC16 thioredoxin domain containing 16 0.00462591
NCKAP1 NCK-associated protein 1 0.00458488
MTUS1 microtubule associated tumor suppressor 1 0.00452015
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.00449324
JAK1 Janus kinase 1 0.00445672
PAPOLA poly(A) polymerase alpha 0.00443502
KDM6A lysine (K)-specific demethylase 6A 0.00439469
FGG fibrinogen gamma chain 0.00430445
RBM33 RNA binding motif protein 33 0.004262
ATF6 activating transcription factor 6 0.00424443
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.00421617
WDFY3 WD repeat and FYVE domain containing 3 0.00415613
SAFB scaffold attachment factor B 0.00411797
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.00411677
BRD2 bromodomain containing 2 0.00409324
NPTN neuroplastin 0.00406938
CCL5 chemokine (C-C motif) ligand 5 0.00406828
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0040355
KIAA1217 KIAA1217 0.0040283
ARHGAP21 Rho GTPase activating protein 21 0.0040214
NUP153 nucleoporin 153kDa 0.00397894
YPEL5 yippee-like 5 (Drosophila) 0.00396459
PDE10A phosphodiesterase 10A 0.0039478
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0038933
KIAA0319 KIAA0319 0.003866
ELF2 E74-like factor 2 (ets domain transcription factor) 0.00385668
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.00382357
RPS2 ribosomal protein S2 0.00381541
OGA O-GlcNAcase 0.00378407
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.00373717
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.003718
CHD1 chromodomain helicase DNA binding protein 1 0.00362046
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.00356861
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.00355096
CUL3 cullin 3 0.00350025
RNF145 ring finger protein 145 0.00348632
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.00348616
ABI1 abl-interactor 1 0.00347838
UBAP2L ubiquitin associated protein 2-like 0.00347367
TUBA1A tubulin, alpha 1a 0.00346181
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0033786
OSBPL9 oxysterol binding protein-like 9 0.00336668
MRTFA myocardin related transcription factor A 0.00334851
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.00334137
GLS2 glutaminase 2 (liver, mitochondrial) 0.00331459
HBP1 HMG-box transcription factor 1 0.00331002
SMAD2 SMAD family member 2 0.00330161
ATOSA atos homolog A 0.00330013
EIF4A2 eukaryotic translation initiation factor 4A2 0.00329048
AKR1C3 aldo-keto reductase family 1, member C3 0.00327936
SCAF8 SR-related CTD-associated factor 8 0.00327282
H2AC6 H2A clustered histone 6 0.00327195
ARHGAP17 Rho GTPase activating protein 17 0.00326625
SERINC1 serine incorporator 1 0.00326619
ZBTB10 zinc finger and BTB domain containing 10 0.0032361
MSMO1 methylsterol monooxygenase 1 0.00322887
CREBRF CREB3 regulatory factor 0.00322756
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.00322036
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 0.0031806
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.00317547

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.303555
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.167763
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.122475
VIM vimentin -0.118252
TMSB10 thymosin beta 10 -0.115541
GRAMD1B GRAM domain containing 1B -0.101627
THSD4 thrombospondin, type I, domain containing 4 -0.0736632
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0687787
DOCK4 dedicator of cytokinesis 4 -0.0668259
FTL ferritin, light polypeptide -0.0644378
ACTG1 actin gamma 1 -0.0628316
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0609939
PDE4D phosphodiesterase 4D, cAMP-specific -0.0598139
AKAP12 A kinase (PRKA) anchor protein 12 -0.0585685
TM4SF1 transmembrane 4 L six family member 1 -0.0580069
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0572505
CMIP c-Maf inducing protein -0.0543917
IGF2 insulin-like growth factor 2 -0.051073
MCL1 myeloid cell leukemia 1 -0.0466761
IER3 immediate early response 3 -0.0411796
S100A6 S100 calcium binding protein A6 -0.0395467
STC1 stanniocalcin 1 -0.0379746
TFPI2 tissue factor pathway inhibitor 2 -0.0376364
RPL23 ribosomal protein L23 -0.0371665
PYGL phosphorylase, glycogen, liver -0.0356038
RPL19 ribosomal protein L19 -0.0341823
CXCL8 chemokine (C-X-C motif) ligand 8 -0.03376
PTMA prothymosin, alpha -0.0331438
IGFBP3 insulin-like growth factor binding protein 3 -0.0323968
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0323366
PKM pyruvate kinase, muscle -0.0312039
FLNB filamin B, beta -0.0310374
DOCK5 dedicator of cytokinesis 5 -0.030595
MAML3 mastermind-like 3 (Drosophila) -0.029848
EGR1 early growth response 1 -0.0294472
RPS8 ribosomal protein S8 -0.0293223
RPLP1 ribosomal protein, large, P1 -0.0292086
RPL35A ribosomal protein L35a -0.0290419
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0289233
SAMD4A sterile alpha motif domain containing 4A -0.0286058
LDHA lactate dehydrogenase A -0.0284064
UBASH3B ubiquitin associated and SH3 domain containing B -0.0275556
PFN1 profilin 1 -0.0269182
EGFR epidermal growth factor receptor -0.0268953
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.026592
FAM107B family with sequence similarity 107, member B -0.0262457
TPM4 tropomyosin 4 -0.0254023
S100A10 S100 calcium binding protein A10 -0.0251538
FMNL2 formin-like 2 -0.0250985
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0250336
RPS6 ribosomal protein S6 -0.0248837
NAV3 neuron navigator 3 -0.0247997
RPS29 ribosomal protein S29 -0.0245652
EIF1 eukaryotic translation initiation factor 1 -0.0245539
RPL31 ribosomal protein L31 -0.0243793
POTEF POTE ankyrin domain family, member F -0.0243351
FTH1 ferritin, heavy polypeptide 1 -0.0241456
RPS19 ribosomal protein S19 -0.0240695
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0238716
RPL37A ribosomal protein L37a -0.0237969
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0235625
ACTN1 actinin, alpha 1 -0.0234213
NRG1 neuregulin 1 -0.0233467
C15ORF48 chromosome 15 open reading frame 48 -0.0229102
RPS21 ribosomal protein S21 -0.0228574
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0228402
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0218649
ARHGAP26 Rho GTPase activating protein 26 -0.0218085
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.021638
RPL36 ribosomal protein L36 -0.021461
ASPH aspartate beta-hydroxylase -0.0212689
PDLIM5 PDZ and LIM domain 5 -0.0210354
HMGA1 high mobility group AT-hook 1 -0.0200533
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0199526
S100A11 S100 calcium binding protein A11 -0.0196138
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0195589
RPS25 ribosomal protein S25 -0.0194873
SLC38A2 solute carrier family 38, member 2 -0.0193775
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0191747
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0188022
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0186135
BICC1 BicC family RNA binding protein 1 -0.0185921
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0182873
AK1 adenylate kinase 1 -0.0181479
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0180175
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0178948
OSMR oncostatin M receptor -0.0177739
EXT1 exostosin glycosyltransferase 1 -0.0177561
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0177503
TXNRD1 thioredoxin reductase 1 -0.0176824
SVIL supervillin -0.0176544
HLA-B major histocompatibility complex, class I, B -0.0175763
PRDX1 peroxiredoxin 1 -0.0173988
ERBIN erbb2 interacting protein -0.0171126
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0168734
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0168508
GLIS3 GLIS family zinc finger 3 -0.0167824
SLC38A1 solute carrier family 38, member 1 -0.0167285
RPS23 ribosomal protein S23 -0.016643
RPS16 ribosomal protein S16 -0.0165807