Paclitaxel_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Paclitaxel perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Paclitaxel_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.112307
PDE10A phosphodiesterase 10A 0.0975118
PM20D1 peptidase M20 domain containing 1 0.0849244
KYNU kynureninase 0.0750491
PDLIM5 PDZ and LIM domain 5 0.0697124
DST dystonin 0.0664303
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0634416
COL8A1 collagen, type VIII, alpha 1 0.0623309
SMOC1 SPARC related modular calcium binding 1 0.0582967
ADGRD1 adhesion G protein-coupled receptor D1 0.0460024
NT5C2 5'-nucleotidase, cytosolic II 0.0455536
SAMD4A sterile alpha motif domain containing 4A 0.0390868
SMAD2 SMAD family member 2 0.0388248
FMNL2 formin-like 2 0.038814
P3H2 prolyl 3-hydroxylase 2 0.0384145
CTIF CBP80/20-dependent translation initiation factor 0.0371216
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0369379
PTPRM protein tyrosine phosphatase, receptor type, M 0.03637
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0359189
FNIP1 folliculin interacting protein 1 0.0345135
AGTPBP1 ATP/GTP binding protein 1 0.0345038
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0344961
NTN4 netrin 4 0.0334867
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0332983
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0331467
WARS1 tryptophanyl-tRNA synthetase 1 0.0313837
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.030533
ZSWIM6 zinc finger, SWIM-type containing 6 0.030466
FNDC3A fibronectin type III domain containing 3A 0.0298379
PDE1A phosphodiesterase 1A, calmodulin-dependent 0.0289655
PTEN phosphatase and tensin homolog 0.0285338
XYLT1 xylosyltransferase I 0.0285196
DNER delta/notch-like EGF repeat containing 0.0283618
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0276992
ESYT2 extended synaptotagmin-like protein 2 0.0269747
HSPA8 heat shock 70kDa protein 8 0.0266163
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0264065
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0255686
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0252767
PRELID2 PRELI domain containing 2 0.0243054
AKAP13 A kinase (PRKA) anchor protein 13 0.0241618
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0232207
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0223898
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0221615
LAMA1 laminin, alpha 1 0.0219603
AUTS2 autism susceptibility candidate 2 0.0217011
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0213638
TGFBR1 transforming growth factor, beta receptor 1 0.0204
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0197694
NCAM1 neural cell adhesion molecule 1 0.0194724
TBXT T-box transcription factor T 0.019445
INTS6 integrator complex subunit 6 0.019443
TUBB4B tubulin, beta 4B class IVb 0.0192631
KDM6A lysine (K)-specific demethylase 6A 0.01923
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0191229
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0189235
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0186862
COPA coatomer protein complex, subunit alpha 0.0185592
OXSR1 oxidative stress responsive 1 0.0182555
ZEB2 zinc finger E-box binding homeobox 2 0.0181143
ZNF644 zinc finger protein 644 0.0174518
RPL3 ribosomal protein L3 0.0168187
HDAC4 histone deacetylase 4 0.0168089
COL5A2 collagen, type V, alpha 2 0.0167621
ANTXR1 anthrax toxin receptor 1 0.0167166
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0164334
SVIL supervillin 0.016336
CDH13 cadherin 13 0.0161633
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0158848
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0157998
GLCE glucuronic acid epimerase 0.0157988
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.015727
RAD51B RAD51 paralog B 0.0154987
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0154333
TMEM178B transmembrane protein 178B 0.0154018
CHSY3 chondroitin sulfate synthase 3 0.01527
TENM2 teneurin transmembrane protein 2 0.0148862
TUBB tubulin, beta class I 0.0147781
FAT1 FAT atypical cadherin 1 0.0145782
ACVR1 activin A receptor, type I 0.0143837
ATP9B ATPase, class II, type 9B 0.0143814
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.014339
TTC28 tetratricopeptide repeat domain 28 0.0142994
EXOC4 exocyst complex component 4 0.0142955
VMP1 vacuole membrane protein 1 0.0141967
CHD1 chromodomain helicase DNA binding protein 1 0.0138754
EXOC6B exocyst complex component 6B 0.0137517
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0136313
PRR5L proline rich 5 like 0.0135129
NRG1 neuregulin 1 0.0134097
CRTC3 CREB regulated transcription coactivator 3 0.0134009
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0133603
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0132082
FER fer (fps/fes related) tyrosine kinase 0.0131704
ZFAND3 zinc finger, AN1-type domain 3 0.013117
CDK13 cyclin-dependent kinase 13 0.013117
KIAA0825 KIAA0825 0.0131062
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0130049
COL4A5 collagen, type IV, alpha 5 0.0129725
RCOR1 REST corepressor 1 0.012959

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.246945
VIM vimentin -0.161504
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.157222
TMSB10 thymosin beta 10 -0.118474
PTMA prothymosin, alpha -0.105023
ASPH aspartate beta-hydroxylase -0.0925563
RPS6 ribosomal protein S6 -0.0906429
RPLP1 ribosomal protein, large, P1 -0.0864544
TFPI2 tissue factor pathway inhibitor 2 -0.0850085
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0832027
TPT1 tumor protein, translationally-controlled 1 -0.0819824
EFNA5 ephrin-A5 -0.0807609
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0802749
NRCAM neuronal cell adhesion molecule -0.0792001
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0728896
RPS8 ribosomal protein S8 -0.0721872
FTL ferritin, light polypeptide -0.0711324
RPS24 ribosomal protein S24 -0.0649133
FN1 fibronectin 1 -0.0636972
S100A6 S100 calcium binding protein A6 -0.062433
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0623408
NAMPT nicotinamide phosphoribosyltransferase -0.0564877
RPL23 ribosomal protein L23 -0.0564369
RPL12 ribosomal protein L12 -0.0560662
S100A10 S100 calcium binding protein A10 -0.0555111
STC1 stanniocalcin 1 -0.055439
RPS19 ribosomal protein S19 -0.0539394
NAP1L1 nucleosome assembly protein 1-like 1 -0.0538329
RPL19 ribosomal protein L19 -0.0537603
RPL35A ribosomal protein L35a -0.0530458
RPL26 ribosomal protein L26 -0.0530345
PGK1 phosphoglycerate kinase 1 -0.0529693
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0511287
RPLP0 ribosomal protein, large, P0 -0.0509872
BASP1 brain abundant, membrane attached signal protein 1 -0.0505301
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0503146
RPL34 ribosomal protein L34 -0.0494454
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.049078
RPL31 ribosomal protein L31 -0.0490692
RPL37A ribosomal protein L37a -0.0469716
IGFBP3 insulin-like growth factor binding protein 3 -0.0465258
SRGN serglycin -0.0459878
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0452931
GNAS GNAS complex locus -0.0431997
RACK1 receptor for activated C kinase 1 -0.0429798
ENO1 enolase 1, (alpha) -0.0423916
EIF1 eukaryotic translation initiation factor 1 -0.0418426
TM4SF1 transmembrane 4 L six family member 1 -0.0411912
RPS14 ribosomal protein S14 -0.0405926
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0403934
PCBP3 poly(rC) binding protein 3 -0.0400256
RPS23 ribosomal protein S23 -0.0399615
NPAS2 neuronal PAS domain protein 2 -0.0396318
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0391694
LMNA lamin A/C -0.0391117
RPS27A ribosomal protein S27a -0.0389454
PSD3 pleckstrin and Sec7 domain containing 3 -0.0388114
RPS12 ribosomal protein S12 -0.0387115
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0386785
LDHA lactate dehydrogenase A -0.0384744
B2M beta-2-microglobulin -0.0381205
INHBA inhibin, beta A -0.037973
RPL9 ribosomal protein L9 -0.0377457
MT2A metallothionein 2A -0.0374511
RPS3 ribosomal protein S3 -0.0374466
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.037251
RPL32 ribosomal protein L32 -0.0371737
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0366578
HLA-B major histocompatibility complex, class I, B -0.0365323
GRAMD1B GRAM domain containing 1B -0.0362367
RPL7A ribosomal protein L7a -0.0347427
RPLP2 ribosomal protein, large, P2 -0.0342019
RPS4X ribosomal protein S4, X-linked -0.0341389
RPL36A ribosomal protein L36a -0.0341304
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.033751
RPS21 ribosomal protein S21 -0.0336436
RPS27 ribosomal protein S27 -0.0324793
CANX calnexin -0.0322153
RPL36 ribosomal protein L36 -0.0314127
RPL37 ribosomal protein L37 -0.0311957
RPS29 ribosomal protein S29 -0.031025
RPL11 ribosomal protein L11 -0.0305171
RPS25 ribosomal protein S25 -0.0300403
RPL18 ribosomal protein L18 -0.0299912
TMSB4X thymosin beta 4, X-linked -0.0296339
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.029569
RPS16 ribosomal protein S16 -0.0295574
RPL35 ribosomal protein L35 -0.0289828
LAMB1 laminin, beta 1 -0.028697
DOCK4 dedicator of cytokinesis 4 -0.0286677
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0286605
SOX4 SRY (sex determining region Y)-box 4 -0.028512
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0280014
NALF1 NALCN channel auxiliary factor 1 -0.0279513
BZW1 basic leucine zipper and W2 domains 1 -0.0276365
RTN1 reticulon 1 -0.0274596
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0272085
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.02717
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) -0.027098
RPS13 ribosomal protein S13 -0.026731