Paclitaxel_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Paclitaxel perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Paclitaxel_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.174685
PCLO piccolo presynaptic cytomatrix protein 0.0951463
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0646716
FNDC3B fibronectin type III domain containing 3B 0.0641157
ANKRD33B ankyrin repeat domain 33B 0.0599979
TRIO trio Rho guanine nucleotide exchange factor 0.0576522
ANK2 ankyrin 2, neuronal 0.0551097
CENPF centromere protein F, 350/400kDa 0.0534835
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0533198
TENM2 teneurin transmembrane protein 2 0.0499761
ZFAND3 zinc finger, AN1-type domain 3 0.0495806
ANKRD11 ankyrin repeat domain 11 0.0494492
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0465774
STAG2 stromal antigen 2 0.0449577
RAD51B RAD51 paralog B 0.0444509
TBL1X transducin (beta)-like 1X-linked 0.0438575
UBAP2 ubiquitin associated protein 2 0.0436888
DST dystonin 0.0433542
SAMD4A sterile alpha motif domain containing 4A 0.0414227
GARS1 glycyl-tRNA synthetase 1 0.0412034
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0407077
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0396803
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.039643
CTBP2 C-terminal binding protein 2 0.0392101
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0392074
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0373186
CDH4 cadherin 4, type 1, R-cadherin (retinal) 0.0368715
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0364136
SLIT2 slit homolog 2 (Drosophila) 0.0360464
GPHN gephyrin 0.0359883
SRRM2 serine/arginine repetitive matrix 2 0.0357166
TENM3 teneurin transmembrane protein 3 0.0355698
ARHGAP32 Rho GTPase activating protein 32 0.0347526
MCL1 myeloid cell leukemia 1 0.0343711
TARS1 threonyl-tRNA synthetase 1 0.0337532
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.033717
NEBL nebulette 0.0336496
JMJD1C jumonji domain containing 1C 0.0334177
ZSWIM6 zinc finger, SWIM-type containing 6 0.0331309
CDK13 cyclin-dependent kinase 13 0.0327576
ATXN2 ataxin 2 0.032316
APP amyloid beta (A4) precursor protein 0.0322073
STAU1 staufen double-stranded RNA binding protein 1 0.0320624
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.032047
ITSN1 intersectin 1 (SH3 domain protein) 0.0318871
SYT1 synaptotagmin I 0.0318756
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.031873
NXN nucleoredoxin 0.0318133
OSBPL10 oxysterol binding protein-like 10 0.0318074
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.031414
ZZZ3 zinc finger, ZZ-type containing 3 0.0311821
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0310013
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0308762
INTS6 integrator complex subunit 6 0.030732
SCAF8 SR-related CTD-associated factor 8 0.0305212
GPC4 glypican 4 0.0300977
TIAM2 T-cell lymphoma invasion and metastasis 2 0.0299092
PRRC2C proline-rich coiled-coil 2C 0.029412
EEF2 eukaryotic translation elongation factor 2 0.0293535
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0289352
IARS1 isoleucyl-tRNA synthetase 1 0.0288349
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0287722
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0284736
NRG1 neuregulin 1 0.0284416
TCF12 transcription factor 12 0.0283425
MKI67 marker of proliferation Ki-67 0.0282227
CABLES1 Cdk5 and Abl enzyme substrate 1 0.0281827
MACF1 microtubule-actin crosslinking factor 1 0.0280327
PPP2R2D protein phosphatase 2, regulatory subunit B, delta 0.0278306
HIBCH 3-hydroxyisobutyryl-CoA hydrolase 0.0275923
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0274614
TEX11 testis expressed 11 0.0273308
CNOT4 CCR4-NOT transcription complex, subunit 4 0.027251
LRP6 low density lipoprotein receptor-related protein 6 0.0269418
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0267881
TUBA1B tubulin, alpha 1b 0.0267852
HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 0.0267613
MT2A metallothionein 2A 0.0267081
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0265842
CEP350 centrosomal protein 350kDa 0.0263439
ARL15 ADP-ribosylation factor-like 15 0.0262151
DPY19L1 dpy-19-like 1 (C. elegans) 0.0260053
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0259376
RAB1A RAB1A, member RAS oncogene family 0.0257405
MED13 mediator complex subunit 13 0.0256631
HELZ helicase with zinc finger 0.0256098
EGFR epidermal growth factor receptor 0.0255024
ZCCHC7 zinc finger, CCHC domain containing 7 0.025362
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0251739
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0251551
USP25 ubiquitin specific peptidase 25 0.0250137
SENP6 SUMO1/sentrin specific peptidase 6 0.0249502
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0248985
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 0.0248895
NCOR2 nuclear receptor corepressor 2 0.0246957
GARRE1 granule associated Rac and RHOG effector 1 0.024691
KDM6A lysine (K)-specific demethylase 6A 0.0243291
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.024268
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.0241153
ARHGAP24 Rho GTPase activating protein 24 0.0240713

decreased expression

Symbol Name Standardized Value
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.203633
COL5A2 collagen, type V, alpha 2 -0.155049
CDH10 cadherin 10, type 2 (T2-cadherin) -0.145354
COL11A1 collagen, type XI, alpha 1 -0.109148
VIM vimentin -0.0703712
GPC3 glypican 3 -0.0624652
PGAP1 post-GPI attachment to proteins 1 -0.0599181
PCDH9 protocadherin 9 -0.0585437
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0583023
ADGRL2 adhesion G protein-coupled receptor L2 -0.0580074
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0515967
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.050958
COL3A1 collagen, type III, alpha 1 -0.0478649
ZEB2 zinc finger E-box binding homeobox 2 -0.046535
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0461844
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0438015
PARD3B par-3 family cell polarity regulator beta -0.0432052
SOX2 SRY (sex determining region Y)-box 2 -0.0427783
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0418354
PBX3 pre-B-cell leukemia homeobox 3 -0.0413475
PEG10 paternally expressed 10 -0.0413103
NCAM2 neural cell adhesion molecule 2 -0.0412921
COL1A2 collagen, type I, alpha 2 -0.0408877
PFN1 profilin 1 -0.0398468
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0397829
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0392422
CADM2 cell adhesion molecule 2 -0.0389961
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0362644
NAP1L1 nucleosome assembly protein 1-like 1 -0.0356936
TSC22D2 TSC22 domain family, member 2 -0.0350204
RAD21 RAD21 homolog (S. pombe) -0.0338077
METAP2 methionyl aminopeptidase 2 -0.0332819
PGK1 phosphoglycerate kinase 1 -0.0331485
SLC30A8 solute carrier family 30 (zinc transporter), member 8 -0.0328809
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0324037
FOXG1 forkhead box G1 -0.0323601
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0321345
PHIP pleckstrin homology domain interacting protein -0.0321238
FIGN fidgetin -0.0317967
ANXA1 annexin A1 -0.031458
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0309933
MEIS2 Meis homeobox 2 -0.0309679
TMSB4X thymosin beta 4, X-linked -0.0306802
THBS1 thrombospondin 1 -0.0306503
PROS1 protein S (alpha) -0.0304801
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.030422
USP3 ubiquitin specific peptidase 3 -0.0299415
DPYD dihydropyrimidine dehydrogenase -0.0297491
LRRN3 leucine rich repeat neuronal 3 -0.0293328
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0291864
HMGA1 high mobility group AT-hook 1 -0.0287025
RHOH ras homolog family member H -0.0283641
NBEAL1 neurobeachin-like 1 -0.0282721
CCN2 cellular communication network factor 2 -0.028012
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 -0.0278903
MRPS30 mitochondrial ribosomal protein S30 -0.0275827
SRSF11 serine/arginine-rich splicing factor 11 -0.0274463
RPS8 ribosomal protein S8 -0.0272098
CALCR calcitonin receptor -0.027102
B2M beta-2-microglobulin -0.0267481
RTN4 reticulon 4 -0.0265633
DARS1 aspartyl-tRNA synthetase 1 -0.0263177
MEF2C myocyte enhancer factor 2C -0.0261169
LYPLA1 lysophospholipase I -0.026095
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0260037
ZFPM2 zinc finger protein, FOG family member 2 -0.0259653
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0257599
TTC28 tetratricopeptide repeat domain 28 -0.0257356
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0254896
RFPL4B ret finger protein-like 4B -0.0253593
FBXO11 F-box protein 11 -0.0248364
CHD9 chromodomain helicase DNA binding protein 9 -0.0248255
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0243676
ZNF292 zinc finger protein 292 -0.0242527
CAPNS1 calpain, small subunit 1 -0.0241096
TNPO3 transportin 3 -0.0240181
MACROD2 MACRO domain containing 2 -0.0236967
U2SURP U2 snRNP-associated SURP domain containing -0.0227774
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -0.0226983
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0226321
GNAS GNAS complex locus -0.0223791
RPL18 ribosomal protein L18 -0.022334
AKAP12 A kinase (PRKA) anchor protein 12 -0.0222689
LPP LIM domain containing preferred translocation partner in lipoma -0.0222378
MAML2 mastermind-like 2 (Drosophila) -0.022128
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0219495
SPAG9 sperm associated antigen 9 -0.0217712
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0217608
CAVIN1 caveolae associated protein 1 -0.0215897
SFRP4 secreted frizzled-related protein 4 -0.0214926
SCAF11 SR-related CTD-associated factor 11 -0.0213773
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0212299
QKI QKI, KH domain containing, RNA binding -0.0211722
CSMD3 CUB and Sushi multiple domains 3 -0.0210974
YBX1 Y box binding protein 1 -0.0209032
ZFR zinc finger RNA binding protein -0.0208029
ARHGAP12 Rho GTPase activating protein 12 -0.0207745
CAMKMT calmodulin-lysine N-methyltransferase -0.0207661
LRRC4C leucine rich repeat containing 4C -0.0206748
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0205573