Palmatine (chloride)_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Palmatine (chloride) perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Palmatine (chloride)_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.182293
ANXA2 annexin A2 0.106586
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0814713
ARHGAP26 Rho GTPase activating protein 26 0.0806692
KYNU kynureninase 0.0751728
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0729197
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0666591
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0644043
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0643215
RPS2 ribosomal protein S2 0.0617541
ZSWIM6 zinc finger, SWIM-type containing 6 0.0610794
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0608537
ALCAM activated leukocyte cell adhesion molecule 0.0591824
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0584855
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0580057
CEMIP cell migration inducing protein, hyaluronan binding 0.0576887
STC1 stanniocalcin 1 0.0573939
MCL1 myeloid cell leukemia 1 0.0552009
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0529601
PCBP2 poly(rC) binding protein 2 0.0528327
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.051781
TM4SF1 transmembrane 4 L six family member 1 0.0512792
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0498697
FAM107B family with sequence similarity 107, member B 0.0496657
VCL vinculin 0.0487683
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0465406
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0449357
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0432131
WWOX WW domain containing oxidoreductase 0.0426451
TGM2 transglutaminase 2 0.04259
PDLIM5 PDZ and LIM domain 5 0.041174
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0400809
AXL AXL receptor tyrosine kinase 0.0398097
LDHA lactate dehydrogenase A 0.0397788
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0396959
SEPTIN9 septin 9 0.0390714
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0383376
RHCG Rh family, C glycoprotein 0.0378621
GRAMD1B GRAM domain containing 1B 0.0377665
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0370855
CXCL8 chemokine (C-X-C motif) ligand 8 0.0366774
APLP2 amyloid beta (A4) precursor-like protein 2 0.036232
EEF1G eukaryotic translation elongation factor 1 gamma 0.0350011
EPAS1 endothelial PAS domain protein 1 0.0344504
EXT1 exostosin glycosyltransferase 1 0.0344028
HSPA8 heat shock 70kDa protein 8 0.0343147
CXCL5 chemokine (C-X-C motif) ligand 5 0.033682
CMIP c-Maf inducing protein 0.0331581
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0328348
MSN moesin 0.0325088
RPL13A ribosomal protein L13a 0.0323497
LMO7 LIM domain 7 0.0322847
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0318535
BPTF bromodomain PHD finger transcription factor 0.0316228
FAT1 FAT atypical cadherin 1 0.0312711
WWC1 WW and C2 domain containing 1 0.0312137
ELL2 elongation factor, RNA polymerase II, 2 0.0309926
RPL7 ribosomal protein L7 0.0309907
BMP6 bone morphogenetic protein 6 0.0298984
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0298459
FLNA filamin A, alpha 0.0296495
AKAP13 A kinase (PRKA) anchor protein 13 0.0296299
VMP1 vacuole membrane protein 1 0.0294742
INTS6 integrator complex subunit 6 0.0292923
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0292471
PDE10A phosphodiesterase 10A 0.0287116
RPS8 ribosomal protein S8 0.0285814
DOCK4 dedicator of cytokinesis 4 0.0283468
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0279938
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0278378
RPLP0 ribosomal protein, large, P0 0.0277957
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0276231
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0275588
TJP1 tight junction protein 1 0.0265099
SH3KBP1 SH3-domain kinase binding protein 1 0.0263928
BRD2 bromodomain containing 2 0.0263175
POTEF POTE ankyrin domain family, member F 0.0259183
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0257273
NCEH1 neutral cholesterol ester hydrolase 1 0.0255086
MYH9 myosin, heavy chain 9, non-muscle 0.024703
UBASH3B ubiquitin associated and SH3 domain containing B 0.0246971
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0246848
SQSTM1 sequestosome 1 0.0246221
NPAS2 neuronal PAS domain protein 2 0.0244497
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0243554
TPM3 tropomyosin 3 0.0240438
FERMT2 fermitin family member 2 0.0238081
GPATCH2L G patch domain containing 2-like 0.0237826
CENPF centromere protein F, 350/400kDa 0.0235072
SMYD3 SET and MYND domain containing 3 0.0232777
BIRC3 baculoviral IAP repeat containing 3 0.0232251
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0231673
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0229733
ENO1 enolase 1, (alpha) 0.0227539
KANK1 KN motif and ankyrin repeat domains 1 0.0225542
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0225363
SHB Src homology 2 domain containing adaptor protein B 0.022512
RTN4 reticulon 4 0.0224025
BTBD10 BTB (POZ) domain containing 10 0.0223471
SET SET nuclear proto-oncogene 0.0221633

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.241908
NDRG1 N-myc downstream regulated 1 -0.201112
IGFBP3 insulin-like growth factor binding protein 3 -0.190397
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.175535
IGFBP4 insulin-like growth factor binding protein 4 -0.103842
CA12 carbonic anhydrase XII -0.0860903
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0808086
RIN2 Ras and Rab interactor 2 -0.0733411
AHNAK AHNAK nucleoprotein -0.0684568
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0683243
RNF213 ring finger protein 213 -0.0661197
AKR1C2 aldo-keto reductase family 1, member C2 -0.0647994
EHBP1 EH domain binding protein 1 -0.0643797
MT1X metallothionein 1X -0.0635686
ANXA4 annexin A4 -0.0610225
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0607919
TNS3 tensin 3 -0.0599149
USP3 ubiquitin specific peptidase 3 -0.0593003
RPS19 ribosomal protein S19 -0.0577057
FLNB filamin B, beta -0.0562333
AUTS2 autism susceptibility candidate 2 -0.054849
RRBP1 ribosome binding protein 1 -0.0502804
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0491045
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0488927
DAPK1 death-associated protein kinase 1 -0.0485265
ZMYND8 zinc finger, MYND-type containing 8 -0.0481708
EFNA5 ephrin-A5 -0.046375
BHLHE40 basic helix-loop-helix family, member e40 -0.0463579
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0461031
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0453567
GRB10 growth factor receptor-bound protein 10 -0.0452889
RAI14 retinoic acid induced 14 -0.0451296
H1-0 H1.0 linker histone -0.0447075
ZBTB20 zinc finger and BTB domain containing 20 -0.0444374
EIF1 eukaryotic translation initiation factor 1 -0.0441166
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0429509
NCOA7 nuclear receptor coactivator 7 -0.0429011
IGF1R insulin-like growth factor 1 receptor -0.0407394
FTL ferritin, light polypeptide -0.0404338
AKAP12 A kinase (PRKA) anchor protein 12 -0.0399746
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0394718
KDM3A lysine (K)-specific demethylase 3A -0.0390181
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0371778
TMSB4X thymosin beta 4, X-linked -0.0368958
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0368835
NPEPPS aminopeptidase puromycin sensitive -0.035556
SLC35F3 solute carrier family 35, member F3 -0.0350325
CP ceruloplasmin (ferroxidase) -0.0350228
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0338918
PRKCA protein kinase C, alpha -0.0338076
S100A10 S100 calcium binding protein A10 -0.032547
FAM13A family with sequence similarity 13, member A -0.0325028
PCSK5 proprotein convertase subtilisin/kexin type 5 -0.0323475
PCED1B PC-esterase domain containing 1B -0.0321738
PHF21A PHD finger protein 21A -0.0316598
PTMA prothymosin, alpha -0.0315162
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0314843
C15ORF48 chromosome 15 open reading frame 48 -0.0305187
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0302807
PTPRM protein tyrosine phosphatase, receptor type, M -0.0299373
MAP1B microtubule-associated protein 1B -0.0296357
KLF6 Kruppel-like factor 6 -0.0294915
TCF12 transcription factor 12 -0.0289071
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0288468
SOD2 superoxide dismutase 2, mitochondrial -0.0288294
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0288213
DNAAF9 dynein axonemal assembly factor 9 -0.0285933
TRIO trio Rho guanine nucleotide exchange factor -0.0285024
RGS17 regulator of G-protein signaling 17 -0.0282541
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0281855
SBF2 SET binding factor 2 -0.0281611
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0274805
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0273932
RPL32 ribosomal protein L32 -0.0272863
SLC38A1 solute carrier family 38, member 1 -0.0272321
DENND4C DENN/MADD domain containing 4C -0.0272057
RPS24 ribosomal protein S24 -0.0266096
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0261406
DENND5B DENN/MADD domain containing 5B -0.0258602
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0256403
PDE4B phosphodiesterase 4B, cAMP-specific -0.0253077
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.0252972
TPM1 tropomyosin 1 (alpha) -0.025116
LAMB3 laminin, beta 3 -0.0248721
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0247424
FMNL2 formin-like 2 -0.0246533
AGFG1 ArfGAP with FG repeats 1 -0.0246209
KCTD9 potassium channel tetramerization domain containing 9 -0.0244711
NRP1 neuropilin 1 -0.0244556
AHNAK2 AHNAK nucleoprotein 2 -0.0237047
CLMN calmin (calponin-like, transmembrane) -0.0236452
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.023478
ANKRD11 ankyrin repeat domain 11 -0.0233477
TKT transketolase -0.0230325
ETV6 ets variant 6 -0.0228321
MXI1 MAX interactor 1, dimerization protein -0.0227125
NCOR1 nuclear receptor corepressor 1 -0.0224702
FBXL2 F-box and leucine-rich repeat protein 2 -0.0224594
RIGI RNA sensor RIG-I -0.0223812
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0223364