Palmatine (chloride)_HEC-1-A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Palmatine (chloride) perturbation in HEC-1-A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Palmatine (chloride)_HEC-1-A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.13307
ASPH aspartate beta-hydroxylase 0.132241
ALCAM activated leukocyte cell adhesion molecule 0.100521
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0991142
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.093316
SMC4 structural maintenance of chromosomes 4 0.0891219
OSBPL10 oxysterol binding protein-like 10 0.0884743
SVIL supervillin 0.0867154
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0827063
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0785458
MACROD2 MACRO domain containing 2 0.0757375
PSD3 pleckstrin and Sec7 domain containing 3 0.075439
TPM4 tropomyosin 4 0.0724795
VCL vinculin 0.0708079
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0664296
LAMC2 laminin, gamma 2 0.0653908
HMGA2 high mobility group AT-hook 2 0.0627456
PAX8 paired box 8 0.0627247
WWC1 WW and C2 domain containing 1 0.0626496
CD44 CD44 molecule (Indian blood group) 0.0620953
FLNA filamin A, alpha 0.0594772
RAD51B RAD51 paralog B 0.0588554
ITGB8 integrin, beta 8 0.0588292
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0533972
TRIO trio Rho guanine nucleotide exchange factor 0.053209
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0524216
WWOX WW domain containing oxidoreductase 0.0515789
ANXA3 annexin A3 0.0510474
PRELID2 PRELI domain containing 2 0.0504897
TBC1D5 TBC1 domain family, member 5 0.0499541
ITGA6 integrin, alpha 6 0.0491033
ERBIN erbb2 interacting protein 0.0478071
SEPTIN9 septin 9 0.0457243
ATXN1 ataxin 1 0.0454532
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0442841
ZBTB20 zinc finger and BTB domain containing 20 0.0442528
RFC3 replication factor C (activator 1) 3, 38kDa 0.0438665
LAMA4 laminin, alpha 4 0.0436213
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0433266
CSNK1A1 casein kinase 1, alpha 1 0.0426912
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0426356
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0411174
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0406976
MT2A metallothionein 2A 0.0403557
SMAD3 SMAD family member 3 0.0399468
ECT2 epithelial cell transforming 2 0.039588
LPP LIM domain containing preferred translocation partner in lipoma 0.0393371
EGFR epidermal growth factor receptor 0.0392153
SH3KBP1 SH3-domain kinase binding protein 1 0.0389594
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0388083
AXL AXL receptor tyrosine kinase 0.0385608
SMYD3 SET and MYND domain containing 3 0.0385564
DIAPH3 diaphanous-related formin 3 0.0385171
ANKRD36 ankyrin repeat domain 36 0.0383994
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0380393
ACTG1 actin gamma 1 0.0374773
NRIP1 nuclear receptor interacting protein 1 0.0374705
MACF1 microtubule-actin crosslinking factor 1 0.0365861
ZFP36L1 ZFP36 ring finger protein-like 1 0.0365684
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0364008
INTS6 integrator complex subunit 6 0.0363233
MKI67 marker of proliferation Ki-67 0.0358897
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0358664
ANXA2 annexin A2 0.0358299
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0357321
AEBP2 AE binding protein 2 0.03567
EZR ezrin 0.0353851
ACTN4 actinin, alpha 4 0.0353213
NCEH1 neutral cholesterol ester hydrolase 1 0.0351843
MPRIP myosin phosphatase Rho interacting protein 0.0351787
FHIT fragile histidine triad 0.0351484
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0350328
DLC1 DLC1 Rho GTPase activating protein 0.0343866
BICD1 bicaudal D homolog 1 (Drosophila) 0.0343604
MBNL1 muscleblind-like splicing regulator 1 0.0337512
CEP128 centrosomal protein 128kDa 0.033706
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0336405
SSH2 slingshot protein phosphatase 2 0.0330718
UBASH3B ubiquitin associated and SH3 domain containing B 0.03287
RHEX regulator of hemoglobinization and erythroid cell expansion 0.0328554
MMS22L MMS22-like, DNA repair protein 0.0327172
MACC1 metastasis associated in colon cancer 1 0.0324935
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0322714
POTEF POTE ankyrin domain family, member F 0.0317657
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0314678
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.031092
SKAP2 src kinase associated phosphoprotein 2 0.0310335
ENO1 enolase 1, (alpha) 0.0309823
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0307425
PATJ PATJ crumbs cell polarity complex component 0.0305476
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0302538
ANLN anillin, actin binding protein 0.0299735
RUNX1 runt-related transcription factor 1 0.0297161
DIAPH1 diaphanous-related formin 1 0.029647
PCNX4 pecanex 4 0.0294278
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.029406
BPTF bromodomain PHD finger transcription factor 0.0293559
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0292186
UTRN utrophin 0.0289833
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0287415

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.124225
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0797181
RPS6 ribosomal protein S6 -0.0723573
GOLGA4 golgin A4 -0.062397
TMSB4X thymosin beta 4, X-linked -0.0547055
RPL23 ribosomal protein L23 -0.046012
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0442834
MATR3 matrin 3 -0.0434369
ZNF292 zinc finger protein 292 -0.0423043
NDRG1 N-myc downstream regulated 1 -0.0342177
SEC24D SEC24 family member D -0.0336428
KDM3A lysine (K)-specific demethylase 3A -0.0311537
ANKRD10 ankyrin repeat domain 10 -0.03089
RPL19 ribosomal protein L19 -0.0305849
EEF2 eukaryotic translation elongation factor 2 -0.0301934
RPS19 ribosomal protein S19 -0.0296384
RPL26 ribosomal protein L26 -0.0295754
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0290889
PPP1R15A protein phosphatase 1, regulatory subunit 15A -0.0284119
PDIA3 protein disulfide isomerase family A, member 3 -0.0283561
RPL35 ribosomal protein L35 -0.0278849
CLINT1 clathrin interactor 1 -0.0277833
PTMA prothymosin, alpha -0.025962
RPL13A ribosomal protein L13a -0.0259046
RPS27 ribosomal protein S27 -0.0258139
EWSR1 EWS RNA-binding protein 1 -0.0247928
RPL34 ribosomal protein L34 -0.0246486
CAMTA1 calmodulin binding transcription activator 1 -0.0236923
UGCG UDP-glucose ceramide glucosyltransferase -0.0233151
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0233079
RPL32 ribosomal protein L32 -0.0229207
HDLBP high density lipoprotein binding protein -0.0224328
RPS21 ribosomal protein S21 -0.0222875
CALR calreticulin -0.0221383
GARS1 glycyl-tRNA synthetase 1 -0.0220688
PDIA5 protein disulfide isomerase family A, member 5 -0.0216076
EIF1 eukaryotic translation initiation factor 1 -0.0215667
RPLP2 ribosomal protein, large, P2 -0.0215249
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0214882
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0210538
B2M beta-2-microglobulin -0.0207832
USP3 ubiquitin specific peptidase 3 -0.0203154
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0202539
RPL4 ribosomal protein L4 -0.0193698
APP amyloid beta (A4) precursor protein -0.0191499
IGFBP3 insulin-like growth factor binding protein 3 -0.0187108
RPS23 ribosomal protein S23 -0.0184543
H1-0 H1.0 linker histone -0.018439
NIBAN1 niban apoptosis regulator 1 -0.0182958
BHLHE40 basic helix-loop-helix family, member e40 -0.0179907
RNF145 ring finger protein 145 -0.0177665
CANX calnexin -0.0175531
RPL3 ribosomal protein L3 -0.0175401
RSL1D1 ribosomal L1 domain containing 1 -0.0172638
SBF2 SET binding factor 2 -0.0171319
RPS8 ribosomal protein S8 -0.0171236
NOP53 NOP53 ribosome biogenesis factor -0.016924
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 -0.0168782
RPL14 ribosomal protein L14 -0.0167393
SEC63 SEC63 homolog (S. cerevisiae) -0.0163483
EIF3A eukaryotic translation initiation factor 3, subunit A -0.016321
RPL8 ribosomal protein L8 -0.0162128
FOXJ3 forkhead box J3 -0.0161733
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0155895
NR1D2 nuclear receptor subfamily 1, group D, member 2 -0.0153639
RPL18 ribosomal protein L18 -0.0153612
CFDP1 craniofacial development protein 1 -0.0152812
AUH AU RNA binding protein/enoyl-CoA hydratase -0.0152647
RPL12 ribosomal protein L12 -0.0151779
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0151469
RSRC2 arginine/serine-rich coiled-coil 2 -0.0151243
RPL28 ribosomal protein L28 -0.0150813
PDIA4 protein disulfide isomerase family A, member 4 -0.0149364
COG5 component of oligomeric golgi complex 5 -0.0149282
HYOU1 hypoxia up-regulated 1 -0.0148416
RPL36 ribosomal protein L36 -0.0148097
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25 -0.0147197
ACBD3 acyl-CoA binding domain containing 3 -0.0147064
CSDE1 cold shock domain containing E1, RNA-binding -0.0146792
PDIA6 protein disulfide isomerase family A, member 6 -0.0145215
CLIP2 CAP-GLY domain containing linker protein 2 -0.0144821
RLF rearranged L-myc fusion -0.0144803
TRAM1 translocation associated membrane protein 1 -0.0141815
PRRC1 proline-rich coiled-coil 1 -0.0140235
RRBP1 ribosome binding protein 1 -0.0139422
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0137613
NDFIP1 Nedd4 family interacting protein 1 -0.0137323
WDR45B WD repeat domain 45B -0.013616
NAMPT nicotinamide phosphoribosyltransferase -0.0135847
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -0.0134423
RPS13 ribosomal protein S13 -0.0132342
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0132308
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0132169
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) -0.0131636
ELP2 elongator acetyltransferase complex subunit 2 -0.0128571
GOLGA2 golgin A2 -0.0127799
RAD23B RAD23 homolog B (S. cerevisiae) -0.0124394
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0123687
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0122769
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0122446