Palmatine (chloride)_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Palmatine (chloride) perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Palmatine (chloride)_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.1798
PDE4D phosphodiesterase 4D, cAMP-specific 0.132352
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.111295
PDE10A phosphodiesterase 10A 0.106874
DST dystonin 0.104157
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.101937
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.101878
COL5A2 collagen, type V, alpha 2 0.0939824
PSD3 pleckstrin and Sec7 domain containing 3 0.0888354
PRKN parkin RBR E3 ubiquitin protein ligase 0.0841834
BASP1 brain abundant, membrane attached signal protein 1 0.0793941
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0790125
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0780588
SMOC1 SPARC related modular calcium binding 1 0.0775961
MAML3 mastermind-like 3 (Drosophila) 0.0760221
PDLIM5 PDZ and LIM domain 5 0.0738554
PCBP2 poly(rC) binding protein 2 0.0705057
DOCK5 dedicator of cytokinesis 5 0.0696945
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0693164
MAP7 microtubule-associated protein 7 0.0608016
PTPRM protein tyrosine phosphatase, receptor type, M 0.0594988
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0593708
NT5C2 5'-nucleotidase, cytosolic II 0.0580093
P3H2 prolyl 3-hydroxylase 2 0.0573114
INTS6 integrator complex subunit 6 0.0568477
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0565521
ESYT2 extended synaptotagmin-like protein 2 0.055383
FMNL2 formin-like 2 0.0551718
ZSWIM6 zinc finger, SWIM-type containing 6 0.0551214
AUTS2 autism susceptibility candidate 2 0.0539216
SMAD2 SMAD family member 2 0.0532726
AGTPBP1 ATP/GTP binding protein 1 0.0524985
PDE7B phosphodiesterase 7B 0.0519416
MCL1 myeloid cell leukemia 1 0.0518095
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0502594
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0488961
RAD51B RAD51 paralog B 0.0436436
COL8A1 collagen, type VIII, alpha 1 0.0421116
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0414826
CHD1 chromodomain helicase DNA binding protein 1 0.0414591
CHL1 cell adhesion molecule L1-like 0.0413267
CTIF CBP80/20-dependent translation initiation factor 0.0410285
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0405333
ANTXR1 anthrax toxin receptor 1 0.0403102
NCOR2 nuclear receptor corepressor 2 0.039342
LSAMP limbic system-associated membrane protein 0.0393185
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0391391
XYLT1 xylosyltransferase I 0.0386712
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0382016
ITPK1 inositol-tetrakisphosphate 1-kinase 0.0379519
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0377097
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0376272
VCL vinculin 0.0371172
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0367288
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0366892
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0361221
HILPDA hypoxia inducible lipid droplet-associated 0.0351483
SDK1 sidekick cell adhesion molecule 1 0.0351248
NRXN3 neurexin 3 0.0345363
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0345198
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.034267
KMT2E lysine (K)-specific methyltransferase 2E 0.0341896
CTBP2 C-terminal binding protein 2 0.0338804
APLP2 amyloid beta (A4) precursor-like protein 2 0.0334142
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0326403
CADM2 cell adhesion molecule 2 0.0321537
WSB1 WD repeat and SOCS box containing 1 0.0320955
AKAP13 A kinase (PRKA) anchor protein 13 0.0317383
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0315782
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0315121
RAB3B RAB3B, member RAS oncogene family 0.0312761
ATXN1 ataxin 1 0.0307684
FTL ferritin, light polypeptide 0.0304275
POTEF POTE ankyrin domain family, member F 0.0304033
MT2A metallothionein 2A 0.029942
EPHA4 EPH receptor A4 0.0298537
GREM2 gremlin 2, DAN family BMP antagonist 0.0298198
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0288374
NRDC nardilysin convertase 0.0287611
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0284021
TGFBR1 transforming growth factor, beta receptor 1 0.0280903
PCDH15 protocadherin-related 15 0.0280457
ADARB1 adenosine deaminase, RNA-specific, B1 0.0280186
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0277535
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0275898
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0274056
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 0.027187
FBXL7 F-box and leucine-rich repeat protein 7 0.0270405
NHSL1 NHS-like 1 0.0270219
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0270056
SEPTIN9 septin 9 0.0269536
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0266478
KYNU kynureninase 0.0263116
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0258323
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0255766
HDAC4 histone deacetylase 4 0.0252338
RAB31 RAB31, member RAS oncogene family 0.0251858
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0250821
ITGA6 integrin, alpha 6 0.0250404
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0250259

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.230051
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.186549
EFNA5 ephrin-A5 -0.127774
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.115255
FN1 fibronectin 1 -0.110433
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.102828
TM4SF1 transmembrane 4 L six family member 1 -0.10232
TXNRD1 thioredoxin reductase 1 -0.0894314
NRCAM neuronal cell adhesion molecule -0.0755368
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0738716
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.072407
TMSB10 thymosin beta 10 -0.0723624
TFPI2 tissue factor pathway inhibitor 2 -0.0701123
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0683144
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0650383
RPS24 ribosomal protein S24 -0.0535716
ASPH aspartate beta-hydroxylase -0.0514194
INHBA inhibin, beta A -0.0488372
PGK1 phosphoglycerate kinase 1 -0.0483109
HLA-B major histocompatibility complex, class I, B -0.0473586
BMERB1 bMERB domain containing 1 -0.0454249
TRIO trio Rho guanine nucleotide exchange factor -0.0453014
TMSB4X thymosin beta 4, X-linked -0.0425453
CANX calnexin -0.0420905
OSMR oncostatin M receptor -0.0413788
AKR1C1 aldo-keto reductase family 1, member C1 -0.0411717
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0389282
RPL4 ribosomal protein L4 -0.0388331
SAMD4A sterile alpha motif domain containing 4A -0.0385233
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0374712
ZEB2 zinc finger E-box binding homeobox 2 -0.0367207
PCBP3 poly(rC) binding protein 3 -0.0337522
COL4A5 collagen, type IV, alpha 5 -0.033666
NCOA7 nuclear receptor coactivator 7 -0.0333593
TGFBI transforming growth factor, beta-induced, 68kDa -0.033056
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0319574
RPL34 ribosomal protein L34 -0.0313903
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0306987
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0306543
AHNAK AHNAK nucleoprotein -0.0300669
RPS21 ribosomal protein S21 -0.0297489
TNPO1 transportin 1 -0.0296614
ARF1 ADP-ribosylation factor 1 -0.0296416
CFLAR CASP8 and FADD-like apoptosis regulator -0.0292046
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0291043
PRRC2C proline-rich coiled-coil 2C -0.0289876
IFIH1 interferon induced with helicase C domain 1 -0.0286293
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 -0.0283825
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0283781
BZW1 basic leucine zipper and W2 domains 1 -0.0280979
PRRC2B proline-rich coiled-coil 2B -0.0280016
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0277189
HDLBP high density lipoprotein binding protein -0.0275559
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0274369
PTMA prothymosin, alpha -0.0271516
SEPTIN10 septin 10 -0.0270754
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0268093
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0267876
IARS1 isoleucyl-tRNA synthetase 1 -0.026773
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.0266304
SLFN5 schlafen family member 5 -0.0265708
ZC3H12C zinc finger CCCH-type containing 12C -0.0262108
IFI16 interferon, gamma-inducible protein 16 -0.026052
TBXT T-box transcription factor T -0.0260068
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0259796
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0255978
RPL26 ribosomal protein L26 -0.0255027
SLC16A6 solute carrier family 16, member 6 -0.0254532
CREB5 cAMP responsive element binding protein 5 -0.0252197
IGF2R insulin-like growth factor 2 receptor -0.0252026
RPL38 ribosomal protein L38 -0.0248368
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0248253
RRBP1 ribosome binding protein 1 -0.0247531
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.024403
ZMYND8 zinc finger, MYND-type containing 8 -0.0242645
EIF1 eukaryotic translation initiation factor 1 -0.0239162
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0238257
CD44 CD44 molecule (Indian blood group) -0.0231631
SLC38A1 solute carrier family 38, member 1 -0.0231393
SCN3A sodium channel, voltage gated, type III alpha subunit -0.0231083
STC1 stanniocalcin 1 -0.0230937
RPL35A ribosomal protein L35a -0.0230598
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0229983
KDM3A lysine (K)-specific demethylase 3A -0.0224055
RPS6 ribosomal protein S6 -0.0223895
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0222204
ENO1 enolase 1, (alpha) -0.0222125
CEP95 centrosomal protein 95kDa -0.0220685
ABLIM1 actin binding LIM protein 1 -0.0213569
MON2 MON2 homolog (S. cerevisiae) -0.0212533
ANKRD28 ankyrin repeat domain 28 -0.0211116
ENAH enabled homolog (Drosophila) -0.0210777
SAR1A secretion associated, Ras related GTPase 1A -0.0206604
TPT1 tumor protein, translationally-controlled 1 -0.0205465
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0203399
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0203279
RSRC2 arginine/serine-rich coiled-coil 2 -0.0201758
AFG2A AFG2 AAA ATPase homolog A -0.0200871
PLCB4 phospholipase C, beta 4 -0.0199351
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0198532