Palmatine (chloride)_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Palmatine (chloride) perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Palmatine (chloride)_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NALF1 NALCN channel auxiliary factor 1 0.166729
FN1 fibronectin 1 0.159858
PRKG1 protein kinase, cGMP-dependent, type I 0.118646
MYO10 myosin X 0.116098
B2M beta-2-microglobulin 0.0940787
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0939552
HMGA2 high mobility group AT-hook 2 0.090848
EXT1 exostosin glycosyltransferase 1 0.0881573
INTS6 integrator complex subunit 6 0.0867441
VCL vinculin 0.0838394
HLA-B major histocompatibility complex, class I, B 0.0796302
ZSWIM6 zinc finger, SWIM-type containing 6 0.0774545
GLIS3 GLIS family zinc finger 3 0.0771286
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0701633
NAV1 neuron navigator 1 0.0681337
TGFBI transforming growth factor, beta-induced, 68kDa 0.0663923
CEMIP cell migration inducing protein, hyaluronan binding 0.0584761
PDLIM5 PDZ and LIM domain 5 0.0578128
MED13L mediator complex subunit 13-like 0.0551209
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0544462
ARHGAP22 Rho GTPase activating protein 22 0.0523013
SAMD4A sterile alpha motif domain containing 4A 0.0518668
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.050735
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0496738
MCL1 myeloid cell leukemia 1 0.0491017
MAML2 mastermind-like 2 (Drosophila) 0.0477692
MT2A metallothionein 2A 0.0473628
JARID2 jumonji, AT rich interactive domain 2 0.0467606
SLIT2 slit homolog 2 (Drosophila) 0.0465404
FBN1 fibrillin 1 0.0464043
TPT1 tumor protein, translationally-controlled 1 0.0461056
CLIC4 chloride intracellular channel 4 0.0458792
CDH13 cadherin 13 0.0446859
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.042981
COL6A1 collagen, type VI, alpha 1 0.0427837
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0399587
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0399394
ADM adrenomedullin 0.0399057
WLS wntless Wnt ligand secretion mediator 0.0398472
POTEF POTE ankyrin domain family, member F 0.0395266
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.039249
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0391871
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0382584
TIMP1 TIMP metallopeptidase inhibitor 1 0.0382361
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0378072
TRIO trio Rho guanine nucleotide exchange factor 0.03744
ACTN1 actinin, alpha 1 0.0373044
MAML3 mastermind-like 3 (Drosophila) 0.0370038
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0369887
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0369077
DGKI diacylglycerol kinase, iota 0.0362904
MACF1 microtubule-actin crosslinking factor 1 0.0352648
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0350511
AKAP13 A kinase (PRKA) anchor protein 13 0.0350047
LYST lysosomal trafficking regulator 0.0347142
PTK2 protein tyrosine kinase 2 0.0342546
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0339307
CLMP CXADR-like membrane protein 0.0336312
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0332968
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0331463
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0330969
CUX1 cut-like homeobox 1 0.0325381
ASPH aspartate beta-hydroxylase 0.0322764
PTPRG protein tyrosine phosphatase, receptor type, G 0.032245
AEBP2 AE binding protein 2 0.0319555
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0318609
HLA-A major histocompatibility complex, class I, A 0.0316868
NABP1 nucleic acid binding protein 1 0.0316331
RAB31 RAB31, member RAS oncogene family 0.0315966
ACTG1 actin gamma 1 0.0315157
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0312738
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0312537
KLF12 Kruppel-like factor 12 0.030909
TPM4 tropomyosin 4 0.030852
HIPK2 homeodomain interacting protein kinase 2 0.0307472
IGFBP7 insulin-like growth factor binding protein 7 0.0306444
NOTCH2 notch 2 0.0301142
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0299824
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0296335
PALLD palladin, cytoskeletal associated protein 0.0295374
GLS2 glutaminase 2 (liver, mitochondrial) 0.0292858
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0291935
PICALM phosphatidylinositol binding clathrin assembly protein 0.0291127
SIK3 SIK family kinase 3 0.0289888
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0289435
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0288919
NPAS2 neuronal PAS domain protein 2 0.0281057
KIAA1549L KIAA1549-like 0.0277428
FRMD4A FERM domain containing 4A 0.0277152
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0276088
RPS12 ribosomal protein S12 0.0275997
MYO1D myosin ID 0.0275975
TIMP2 TIMP metallopeptidase inhibitor 2 0.0275831
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0274156
TTC28 tetratricopeptide repeat domain 28 0.0274028
MSN moesin 0.0271007
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0270878
DOCK5 dedicator of cytokinesis 5 0.0268672
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0267227
MYO1E myosin IE 0.0267156

decreased expression

Symbol Name Standardized Value
INHBA inhibin, beta A -0.139697
MMP1 matrix metallopeptidase 1 -0.124145
NDRG1 N-myc downstream regulated 1 -0.0928826
ELL2 elongation factor, RNA polymerase II, 2 -0.0857226
VIM vimentin -0.0757543
COL6A3 collagen, type VI, alpha 3 -0.0752836
ATP13A3 ATPase type 13A3 -0.066303
FAM13A family with sequence similarity 13, member A -0.0636867
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0628913
PDE4D phosphodiesterase 4D, cAMP-specific -0.0624158
NAMPT nicotinamide phosphoribosyltransferase -0.0531494
TMSB10 thymosin beta 10 -0.0524478
OSMR oncostatin M receptor -0.0511272
PLPP3 phospholipid phosphatase 3 -0.0431038
ARHGAP21 Rho GTPase activating protein 21 -0.0400598
GREM1 gremlin 1, DAN family BMP antagonist -0.0374828
ADGRB3 adhesion G protein-coupled receptor B3 -0.0371972
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0368316
NGLY1 N-glycanase 1 -0.0365567
AKAP12 A kinase (PRKA) anchor protein 12 -0.0355506
SOD2 superoxide dismutase 2, mitochondrial -0.0347827
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0344194
COL4A2 collagen, type IV, alpha 2 -0.0342853
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 -0.0338027
LOC112694756 uncharaterized LOC112694756 -0.0336059
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0322198
PGK1 phosphoglycerate kinase 1 -0.0307426
LOXL2 lysyl oxidase-like 2 -0.027527
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0267863
USP3 ubiquitin specific peptidase 3 -0.0262817
ZNF292 zinc finger protein 292 -0.0256601
XPO1 exportin 1 -0.0256168
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0256067
GARS1 glycyl-tRNA synthetase 1 -0.0254723
PAMR1 peptidase domain containing associated with muscle regeneration 1 -0.0247033
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.024422
MSI2 musashi RNA-binding protein 2 -0.0241769
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0235554
TBC1D23 TBC1 domain family, member 23 -0.0235268
PTMA prothymosin, alpha -0.0235111
MMP12 matrix metallopeptidase 12 -0.0233755
H1-0 H1.0 linker histone -0.0232723
CDC27 cell division cycle 27 -0.0226732
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0224095
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0220776
RRBP1 ribosome binding protein 1 -0.0219698
SRP54 signal recognition particle 54kDa -0.0218084
KLF7 Kruppel-like factor 7 (ubiquitous) -0.021483
GOLGA4 golgin A4 -0.0213522
MTSS1 metastasis suppressor 1 -0.0210887
APOLD1 apolipoprotein L domain containing 1 -0.0210267
CEP95 centrosomal protein 95kDa -0.0207523
MON2 MON2 homolog (S. cerevisiae) -0.0206856
DUSP10 dual specificity phosphatase 10 -0.0202148
WIPI1 WD repeat domain, phosphoinositide interacting 1 -0.019824
SYAP1 synapse associated protein 1 -0.0195499
RNF145 ring finger protein 145 -0.019421
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0194022
CDK17 cyclin-dependent kinase 17 -0.0191567
RAB8B RAB8B, member RAS oncogene family -0.0189855
INSIG1 insulin induced gene 1 -0.0189654
TNPO1 transportin 1 -0.0188614
CENPF centromere protein F, 350/400kDa -0.0181855
CDK19 cyclin-dependent kinase 19 -0.0178252
RPL4 ribosomal protein L4 -0.0177291
LCORL ligand dependent nuclear receptor corepressor-like -0.0174652
ABI3BP ABI family, member 3 (NESH) binding protein -0.0173022
SUCO SUN domain containing ossification factor -0.0171487
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0168996
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0168386
EIF1 eukaryotic translation initiation factor 1 -0.0167624
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0167157
CHSY1 chondroitin sulfate synthase 1 -0.016517
TRPC4 transient receptor potential cation channel, subfamily C, member 4 -0.0164232
RPL35A ribosomal protein L35a -0.0163843
SEC23A Sec23 homolog A (S. cerevisiae) -0.0163043
APAF1 apoptotic peptidase activating factor 1 -0.0161582
ZFC3H1 zinc finger, C3H1-type containing -0.0160428
BZW1 basic leucine zipper and W2 domains 1 -0.0160308
ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 -0.015856
HAS2 hyaluronan synthase 2 -0.0157128
RARS1 arginyl-tRNA synthetase 1 -0.0157057
THRAP3 thyroid hormone receptor associated protein 3 -0.0156891
NFIL3 nuclear factor, interleukin 3 regulated -0.0154752
TMSB4X thymosin beta 4, X-linked -0.0154111
HM13 histocompatibility (minor) 13 -0.0153352
YME1L1 YME1-like 1 ATPase -0.0151734
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.015051
GCC2 GRIP and coiled-coil domain containing 2 -0.0150107
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0149964
RPS24 ribosomal protein S24 -0.0147839
RAD21 RAD21 homolog (S. pombe) -0.0147645
PTEN phosphatase and tensin homolog -0.0147435
SAR1A secretion associated, Ras related GTPase 1A -0.0147333
BRWD3 bromodomain and WD repeat domain containing 3 -0.0146098
CAMTA1 calmodulin binding transcription activator 1 -0.0145544
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.014547
TXNRD1 thioredoxin reductase 1 -0.0143787
ELP2 elongator acetyltransferase complex subunit 2 -0.0143237
FBN2 fibrillin 2 -0.0142755