Panobinostat_Hs 766T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Panobinostat perturbation in Hs 766T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Panobinostat_Hs 766T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0536941
PLAT plasminogen activator, tissue 0.0522292
NAMPT nicotinamide phosphoribosyltransferase 0.0454989
ARHGAP9 Rho GTPase activating protein 9 0.0437498
CMIP c-Maf inducing protein 0.0370323
CUL4B cullin 4B 0.0338866
ANLN anillin, actin binding protein 0.0331649
VCL vinculin 0.0296031
FLNB filamin B, beta 0.029467
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0286726
BCL2L1 BCL2-like 1 0.0275838
CEMIP cell migration inducing protein, hyaluronan binding 0.0248972
SLC45A4 solute carrier family 45, member 4 0.0242594
TGM2 transglutaminase 2 0.0236382
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0235672
PLEC plectin 0.0233233
COL26A1 collagen, type XXVI, alpha 1 0.0228615
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0227702
HYCC2 hyccin PI4KA lipid kinase complex subunit 2 0.0223587
RERE arginine-glutamic acid dipeptide (RE) repeats 0.02234
ALDH3A1 aldehyde dehydrogenase 3 family, member A1 0.0221231
DLG1 discs, large homolog 1 (Drosophila) 0.0219143
LIFR leukemia inhibitory factor receptor alpha 0.0214796
ALDH1A3 aldehyde dehydrogenase 1 family, member A3 0.0202199
ANKRD28 ankyrin repeat domain 28 0.0198644
IL1RAP interleukin 1 receptor accessory protein 0.0197548
EPHA2 EPH receptor A2 0.0194696
CTNND1 catenin (cadherin-associated protein), delta 1 0.0194343
NCOA3 nuclear receptor coactivator 3 0.019188
NPEPPS aminopeptidase puromycin sensitive 0.0190673
MBNL2 muscleblind-like splicing regulator 2 0.0188984
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0186974
NCEH1 neutral cholesterol ester hydrolase 1 0.0184522
ABLIM2 actin binding LIM protein family, member 2 0.0184503
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.018246
SHB Src homology 2 domain containing adaptor protein B 0.0173132
GATA6 GATA binding protein 6 0.0170536
WDR26 WD repeat domain 26 0.0167686
ARRDC3 arrestin domain containing 3 0.0167485
PHF21A PHD finger protein 21A 0.0166236
EFHD2 EF-hand domain family, member D2 0.0164723
TRIO trio Rho guanine nucleotide exchange factor 0.0163247
EMP1 epithelial membrane protein 1 0.0162315
TRAPPC9 trafficking protein particle complex 9 0.0161959
TXNRD1 thioredoxin reductase 1 0.0161771
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0160642
ANKRD33B ankyrin repeat domain 33B 0.016012
PTEN phosphatase and tensin homolog 0.015981
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.0158081
KDM3A lysine (K)-specific demethylase 3A 0.0156665
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0152916
VMP1 vacuole membrane protein 1 0.0152722
GOLGA4 golgin A4 0.0152583
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0151761
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0149788
TAOK3 TAO kinase 3 0.0148435
ADARB1 adenosine deaminase, RNA-specific, B1 0.0148356
HIP1 huntingtin interacting protein 1 0.0147838
BZW2 basic leucine zipper and W2 domains 2 0.0146746
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0144648
FAM13A family with sequence similarity 13, member A 0.0143963
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0141608
SNX29 sorting nexin 29 0.014103
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0141013
GLS2 glutaminase 2 (liver, mitochondrial) 0.0140028
PIBF1 progesterone immunomodulatory binding factor 1 0.0139455
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0137462
NUP58 nucleoporin 58 0.0135577
SND1 staphylococcal nuclease and tudor domain containing 1 0.0134895
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0134457
PLAC8 placenta-specific 8 0.01344
ZNF217 zinc finger protein 217 0.0132926
COG5 component of oligomeric golgi complex 5 0.0132353
BRWD3 bromodomain and WD repeat domain containing 3 0.0130489
SERTAD2 SERTA domain containing 2 0.0130276
NGLY1 N-glycanase 1 0.0129407
EDA ectodysplasin A 0.0128254
RB1CC1 RB1-inducible coiled-coil 1 0.0127088
KDM5B lysine (K)-specific demethylase 5B 0.0126087
TUFT1 tuftelin 1 0.0126015
CHSY1 chondroitin sulfate synthase 1 0.012554
LMNA lamin A/C 0.0123906
SRP54 signal recognition particle 54kDa 0.0123872
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0123603
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.012349
NRG1 neuregulin 1 0.0122279
EXOC6B exocyst complex component 6B 0.0122205
HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 0.0122121
RLF rearranged L-myc fusion 0.0122025
SQLE squalene epoxidase 0.0121448
GMDS GDP-mannose 4,6-dehydratase 0.0121426
EZR ezrin 0.0120573
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0119802
SEPTIN9 septin 9 0.0119063
RNF19B ring finger protein 19B 0.0118135
EML6 echinoderm microtubule associated protein like 6 0.0117164
THOC2 THO complex 2 0.0115786
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0115681
ARL5B ADP-ribosylation factor-like 5B 0.0112908
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0112764

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.340505
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.216482
TIMP3 TIMP metallopeptidase inhibitor 3 -0.214326
MTSS1 metastasis suppressor 1 -0.194752
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.141049
PDLIM5 PDZ and LIM domain 5 -0.128823
SLC35F3 solute carrier family 35, member F3 -0.116698
LMO7 LIM domain 7 -0.110227
PDE4D phosphodiesterase 4D, cAMP-specific -0.100248
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0965909
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 -0.0951184
PALM2AKAP2 PALM2 and AKAP2 fusion -0.092641
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0889353
RAI14 retinoic acid induced 14 -0.079118
STC1 stanniocalcin 1 -0.0789983
ALCAM activated leukocyte cell adhesion molecule -0.0725387
INTS6 integrator complex subunit 6 -0.0691862
TPT1 tumor protein, translationally-controlled 1 -0.0646648
ANO1 anoctamin 1, calcium activated chloride channel -0.0638115
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0632813
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0628645
NRIP1 nuclear receptor interacting protein 1 -0.0619651
HMGA2 high mobility group AT-hook 2 -0.0616708
RASAL2 RAS protein activator like 2 -0.0611716
SULF2 sulfatase 2 -0.0602724
ABI3BP ABI family, member 3 (NESH) binding protein -0.0595446
BCAR3 breast cancer anti-estrogen resistance 3 -0.0590486
PALLD palladin, cytoskeletal associated protein -0.0577552
LAMC2 laminin, gamma 2 -0.0574024
DPYD dihydropyrimidine dehydrogenase -0.0570915
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0545173
MT2A metallothionein 2A -0.0532278
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0532216
PLS3 plastin 3 -0.052641
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0518299
AHNAK AHNAK nucleoprotein -0.0510662
LDHA lactate dehydrogenase A -0.0510109
ZEB1 zinc finger E-box binding homeobox 1 -0.050911
CDK6 cyclin-dependent kinase 6 -0.0492652
MACF1 microtubule-actin crosslinking factor 1 -0.0489998
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.048557
GRB10 growth factor receptor-bound protein 10 -0.0484113
MYOF myoferlin -0.0475192
RNF217 ring finger protein 217 -0.0474491
UTRN utrophin -0.0453107
MECOM MDS1 and EVI1 complex locus -0.0452559
RCOR1 REST corepressor 1 -0.0446367
PODXL podocalyxin-like -0.0446104
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0440865
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0439602
RPS8 ribosomal protein S8 -0.0422684
PTK2 protein tyrosine kinase 2 -0.0409816
PRSS23 protease, serine, 23 -0.04069
SQSTM1 sequestosome 1 -0.0398787
H1-0 H1.0 linker histone -0.0398407
CNTNAP3 contactin associated protein-like 3 -0.0387473
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0375716
CALR calreticulin -0.0374634
HSPG2 heparan sulfate proteoglycan 2 -0.0374579
EPB41L1 erythrocyte membrane protein band 4.1-like 1 -0.0372616
RABGAP1L RAB GTPase activating protein 1-like -0.0369949
TNS3 tensin 3 -0.036969
RPS6 ribosomal protein S6 -0.036721
EFNA5 ephrin-A5 -0.0367114
TSC22D1 TSC22 domain family, member 1 -0.036399
DGKH diacylglycerol kinase, eta -0.0361501
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0360967
KLF5 Kruppel-like factor 5 (intestinal) -0.0358345
JMJD1C jumonji domain containing 1C -0.035833
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 -0.0357886
PSD3 pleckstrin and Sec7 domain containing 3 -0.0353221
RIGI RNA sensor RIG-I -0.034832
DOK5 docking protein 5 -0.0339063
RPL37 ribosomal protein L37 -0.0338953
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0336876
CLIC4 chloride intracellular channel 4 -0.0336675
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0332081
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0328831
KIAA1671 KIAA1671 -0.0325184
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0322597
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0321911
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0317948
RPL11 ribosomal protein L11 -0.0317416
LOC112694756 uncharaterized LOC112694756 -0.0315988
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0313483
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0312666
FTH1 ferritin, heavy polypeptide 1 -0.0310261
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0308026
THSD4 thrombospondin, type I, domain containing 4 -0.0306284
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0306161
SULF1 sulfatase 1 -0.0304386
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0304289
EXOC4 exocyst complex component 4 -0.029818
IFI44L interferon-induced protein 44-like -0.0296344
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0296168
EGFR epidermal growth factor receptor -0.0294337
ANXA2 annexin A2 -0.0291373
RAD51B RAD51 paralog B -0.029086
HDAC9 histone deacetylase 9 -0.0290165
RPS12 ribosomal protein S12 -0.0289211