Pemigatinib_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pemigatinib perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pemigatinib_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.198818
NLGN1 neuroligin 1 0.148095
HMGA2 high mobility group AT-hook 2 0.12735
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0907532
PDE4D phosphodiesterase 4D, cAMP-specific 0.085997
EHBP1 EH domain binding protein 1 0.08309
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0820892
ZBTB20 zinc finger and BTB domain containing 20 0.0794211
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0781578
DPYD dihydropyrimidine dehydrogenase 0.0754495
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0753541
INTS6 integrator complex subunit 6 0.0734022
ZSWIM6 zinc finger, SWIM-type containing 6 0.072771
VMP1 vacuole membrane protein 1 0.0711198
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0702833
ASPH aspartate beta-hydroxylase 0.065528
ANKRD12 ankyrin repeat domain 12 0.0618926
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0616894
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0556614
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0539353
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0534116
YAP1 Yes-associated protein 1 0.0524554
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0481501
TBC1D5 TBC1 domain family, member 5 0.0478738
PDGFC platelet derived growth factor C 0.0474505
ZEB1 zinc finger E-box binding homeobox 1 0.0459995
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0459453
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0458535
RASAL2 RAS protein activator like 2 0.0445964
ANKRD28 ankyrin repeat domain 28 0.044565
MED13L mediator complex subunit 13-like 0.0445535
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0435015
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0432476
PARD3 par-3 family cell polarity regulator 0.0429725
USP34 ubiquitin specific peptidase 34 0.0419901
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0418105
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0413358
PRKCE protein kinase C, epsilon 0.0403099
KIAA1328 KIAA1328 0.0394128
RHOA ras homolog family member A 0.0393285
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0393015
METTL15 methyltransferase like 15 0.0385168
MSI2 musashi RNA-binding protein 2 0.0368971
HDAC9 histone deacetylase 9 0.0357808
EIF4A2 eukaryotic translation initiation factor 4A2 0.0355744
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0353707
GCG glucagon 0.035357
SLC38A2 solute carrier family 38, member 2 0.0353483
TPT1 tumor protein, translationally-controlled 1 0.0353257
TMCC1 transmembrane and coiled-coil domain family 1 0.0352378
ADAMTSL1 ADAMTS-like 1 0.0349417
SIK3 SIK family kinase 3 0.0349276
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0346055
NFIB nuclear factor I/B 0.0344918
TRAPPC9 trafficking protein particle complex 9 0.0340495
CAMKMT calmodulin-lysine N-methyltransferase 0.034043
TNRC18 trinucleotide repeat containing 18 0.0339256
ANXA1 annexin A1 0.0335289
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0330323
RABGAP1L RAB GTPase activating protein 1-like 0.0326071
PHF21A PHD finger protein 21A 0.0324799
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0319792
NECTIN3 nectin cell adhesion molecule 3 0.0319677
PCDH7 protocadherin 7 0.0318795
ANKRD17 ankyrin repeat domain 17 0.0317255
CALR calreticulin 0.0317147
FER fer (fps/fes related) tyrosine kinase 0.031603
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0314005
AKAP13 A kinase (PRKA) anchor protein 13 0.031026
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0310031
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0309195
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.030827
ELP4 elongator acetyltransferase complex subunit 4 0.03071
RCOR1 REST corepressor 1 0.0307063
R3HDM2 R3H domain containing 2 0.0305873
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0302467
RPL13A ribosomal protein L13a 0.0294726
TOP1 topoisomerase (DNA) I 0.0293694
CSMD3 CUB and Sushi multiple domains 3 0.0293251
WDFY3 WD repeat and FYVE domain containing 3 0.0288355
CYSTM1 cysteine-rich transmembrane module containing 1 0.0283573
BCHE butyrylcholinesterase 0.0278561
LPP LIM domain containing preferred translocation partner in lipoma 0.0278453
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0276705
BLTP1 bridge-like lipid transfer protein family member 1 0.0276243
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0274085
AHNAK AHNAK nucleoprotein 0.0272044
TMEM108 transmembrane protein 108 0.0271742
MICU3 mitochondrial calcium uptake family, member 3 0.0271071
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0266476
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0263731
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0263276
LARP4B La ribonucleoprotein domain family, member 4B 0.02604
EXOC4 exocyst complex component 4 0.0258839
DSCAM Down syndrome cell adhesion molecule 0.0258364
FHIT fragile histidine triad 0.0257534
PRELID2 PRELI domain containing 2 0.0254688
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 0.025222
MYO1D myosin ID 0.0252111
EIF1 eukaryotic translation initiation factor 1 0.025161

decreased expression

Symbol Name Standardized Value
SMC4 structural maintenance of chromosomes 4 -0.0555816
MYL12B myosin, light chain 12B, regulatory -0.0424701
TMSB10 thymosin beta 10 -0.0369365
CENPF centromere protein F, 350/400kDa -0.0348779
XPO1 exportin 1 -0.034374
NCOR1 nuclear receptor corepressor 1 -0.0331359
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0331016
MKI67 marker of proliferation Ki-67 -0.032919
RPLP0 ribosomal protein, large, P0 -0.0328767
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0327785
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0327398
MATR3 matrin 3 -0.0325887
TOP2A topoisomerase (DNA) II alpha 170kDa -0.030369
MAP1B microtubule-associated protein 1B -0.0300506
KIF5B kinesin family member 5B -0.0289318
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0283007
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0282268
OXR1 oxidation resistance 1 -0.0281073
RPS6 ribosomal protein S6 -0.028052
FTL ferritin, light polypeptide -0.0276981
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.027588
CHD1 chromodomain helicase DNA binding protein 1 -0.0273646
PDK4 pyruvate dehydrogenase kinase, isozyme 4 -0.0272973
SRSF11 serine/arginine-rich splicing factor 11 -0.0272572
PLK2 polo-like kinase 2 -0.0265836
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0260289
BIRC2 baculoviral IAP repeat containing 2 -0.0259218
ADAM17 ADAM metallopeptidase domain 17 -0.0257169
KLF6 Kruppel-like factor 6 -0.0255798
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0251274
CEP95 centrosomal protein 95kDa -0.0247642
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 -0.0240102
TASOR2 transcription activation suppressor family member 2 -0.0233473
TMEM123 transmembrane protein 123 -0.0231897
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 -0.0231066
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0224133
TENM3 teneurin transmembrane protein 3 -0.0223429
PEG10 paternally expressed 10 -0.0223411
AREG amphiregulin -0.0221069
UHMK1 U2AF homology motif (UHM) kinase 1 -0.0217449
ECT2 epithelial cell transforming 2 -0.021327
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha -0.0212814
YBX1 Y box binding protein 1 -0.0210463
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0209808
CKAP5 cytoskeleton associated protein 5 -0.0206904
RBM25 RNA binding motif protein 25 -0.0204818
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0203734
SNX13 sorting nexin 13 -0.0198357
TRA2A transformer 2 alpha homolog (Drosophila) -0.0197812
RAB10 RAB10, member RAS oncogene family -0.019583
WWOX WW domain containing oxidoreductase -0.0193211
PUM2 pumilio RNA-binding family member 2 -0.0191712
FUS FUS RNA binding protein -0.0190664
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0184023
MGAT4C MGAT4 family, member C -0.0184016
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0183834
RPL4 ribosomal protein L4 -0.018368
AFG3L2 AFG3-like AAA ATPase 2 -0.0181431
NCKAP1 NCK-associated protein 1 -0.0180028
JAK1 Janus kinase 1 -0.0179939
RB1CC1 RB1-inducible coiled-coil 1 -0.0177826
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0176914
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0176646
KLHL24 kelch-like family member 24 -0.017653
HSPB1 heat shock 27kDa protein 1 -0.0175532
ANXA2 annexin A2 -0.017529
CEP192 centrosomal protein 192kDa -0.0175091
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.017347
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.017332
RPS24 ribosomal protein S24 -0.017316
TPM3 tropomyosin 3 -0.0172246
PCNX1 pecanex 1 -0.0171906
ADGRG6 adhesion G protein-coupled receptor G6 -0.0171383
RBM27 RNA binding motif protein 27 -0.0170971
FAT1 FAT atypical cadherin 1 -0.0168707
HMGB2 high mobility group box 2 -0.0168394
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0168277
CAMTA1 calmodulin binding transcription activator 1 -0.0167769
NPHP3 nephronophthisis 3 (adolescent) -0.0167766
PSIP1 PC4 and SFRS1 interacting protein 1 -0.0167674
EEF1G eukaryotic translation elongation factor 1 gamma -0.0166831
SGO2 shugoshin 2 -0.0165532
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0164864
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0164039
AFTPH aftiphilin -0.0164003
PRR11 proline rich 11 -0.0163681
GRB2 growth factor receptor-bound protein 2 -0.0161852
TBC1D15 TBC1 domain family, member 15 -0.0161771
CSNK1A1 casein kinase 1, alpha 1 -0.0157934
BRWD3 bromodomain and WD repeat domain containing 3 -0.0157859
MIS18BP1 MIS18 binding protein 1 -0.0157642
DDB2 damage-specific DNA binding protein 2, 48kDa -0.0156122
SPATS2 spermatogenesis associated, serine-rich 2 -0.0155982
OLA1 Obg-like ATPase 1 -0.015448
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0152208
HMGA1 high mobility group AT-hook 1 -0.0152193
RACK1 receptor for activated C kinase 1 -0.0151442
CDK17 cyclin-dependent kinase 17 -0.0150644
USP24 ubiquitin specific peptidase 24 -0.0150513
FMNL2 formin-like 2 -0.0150264