Pemigatinib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pemigatinib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pemigatinib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.22657
EXT1 exostosin glycosyltransferase 1 0.187959
INTS6 integrator complex subunit 6 0.12961
SPTBN1 spectrin, beta, non-erythrocytic 1 0.128385
GMDS GDP-mannose 4,6-dehydratase 0.0984087
AKAP13 A kinase (PRKA) anchor protein 13 0.0864679
GCLC glutamate-cysteine ligase, catalytic subunit 0.0836183
ARHGAP26 Rho GTPase activating protein 26 0.0806909
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0803811
SMAD3 SMAD family member 3 0.0791924
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0781313
MX1 MX dynamin-like GTPase 1 0.0728344
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0725752
MYO1E myosin IE 0.0719757
ANXA2 annexin A2 0.0707096
RAB7A RAB7A, member RAS oncogene family 0.0691975
TMC5 transmembrane channel-like 5 0.0690949
MCU mitochondrial calcium uniporter 0.0687442
ZSWIM6 zinc finger, SWIM-type containing 6 0.0673054
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0662669
VCL vinculin 0.0655823
RNF213 ring finger protein 213 0.0654599
EPSTI1 epithelial stromal interaction 1 (breast) 0.0650002
TJP1 tight junction protein 1 0.0636696
FNIP2 folliculin interacting protein 2 0.0633786
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0619499
HKDC1 hexokinase domain containing 1 0.061263
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0598373
MACC1 metastasis associated in colon cancer 1 0.0586479
ANKRD10 ankyrin repeat domain 10 0.0577549
SHB Src homology 2 domain containing adaptor protein B 0.0549231
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0548838
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0535971
SIK3 SIK family kinase 3 0.0535883
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0535728
CATSPERB catsper channel auxiliary subunit beta 0.0523176
MX2 MX dynamin-like GTPase 2 0.0513175
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0509841
C6ORF132 chromosome 6 open reading frame 132 0.0508248
DSCAM Down syndrome cell adhesion molecule 0.0507988
LAMA4 laminin, alpha 4 0.049652
ERBIN erbb2 interacting protein 0.0492378
PHF3 PHD finger protein 3 0.0491157
RIGI RNA sensor RIG-I 0.0489322
PLSCR1 phospholipid scramblase 1 0.0482464
KYNU kynureninase 0.0479741
LCN2 lipocalin 2 0.0473919
SERINC5 serine incorporator 5 0.0464701
ZNF292 zinc finger protein 292 0.0463524
DIAPH1 diaphanous-related formin 1 0.0461787
ATP11A ATPase, class VI, type 11A 0.0453375
SPATA13 spermatogenesis associated 13 0.0448211
IFNGR1 interferon gamma receptor 1 0.0435172
TRIM2 tripartite motif containing 2 0.0431393
LPP LIM domain containing preferred translocation partner in lipoma 0.0424897
BTBD9 BTB (POZ) domain containing 9 0.0413025
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0410656
STK24 serine/threonine kinase 24 0.040805
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0408035
SPAG9 sperm associated antigen 9 0.0393768
GOLGB1 golgin B1 0.0389074
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0388575
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0382041
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0377429
RSAD2 radical S-adenosyl methionine domain containing 2 0.0376666
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0374832
BAIAP2L1 BAI1-associated protein 2-like 1 0.0374367
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0374184
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0368896
VMP1 vacuole membrane protein 1 0.0368582
JAK1 Janus kinase 1 0.0367511
RASAL2 RAS protein activator like 2 0.0366682
ALCAM activated leukocyte cell adhesion molecule 0.0366207
RBM47 RNA binding motif protein 47 0.0359075
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.0354997
PRKCA protein kinase C, alpha 0.0352416
STS steroid sulfatase (microsomal), isozyme S 0.0350523
TSHZ2 teashirt zinc finger homeobox 2 0.0350435
TOP1 topoisomerase (DNA) I 0.03499
MAP7 microtubule-associated protein 7 0.0346717
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0345144
ADAR adenosine deaminase, RNA-specific 0.0337736
EPHB2 EPH receptor B2 0.0335136
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0333245
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.032527
EFNB2 ephrin-B2 0.0323129
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0321276
ZC3H13 zinc finger CCCH-type containing 13 0.0321019
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae) 0.0320337
MCL1 myeloid cell leukemia 1 0.0316695
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.031516
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0311045
CXCL8 chemokine (C-X-C motif) ligand 8 0.0306793
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0304848
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0302174
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 0.0300768
TRIO trio Rho guanine nucleotide exchange factor 0.0300118
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.029888
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0296018
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0293079

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.108387
TPT1 tumor protein, translationally-controlled 1 -0.077017
PTMA prothymosin, alpha -0.064014
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0635734
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0624478
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0512178
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0496259
TMPRSS4 transmembrane protease, serine 4 -0.0479722
RNF149 ring finger protein 149 -0.046849
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0427708
NDRG1 N-myc downstream regulated 1 -0.0427352
ZMYND8 zinc finger, MYND-type containing 8 -0.041318
WDR45B WD repeat domain 45B -0.0367817
ESYT2 extended synaptotagmin-like protein 2 -0.0357579
SREBF2 sterol regulatory element binding transcription factor 2 -0.0337955
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.03222
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0314553
H1-0 H1.0 linker histone -0.0293261
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0287643
GNAS GNAS complex locus -0.02865
ABHD2 abhydrolase domain containing 2 -0.0283495
DNM2 dynamin 2 -0.0282075
PTEN phosphatase and tensin homolog -0.0278359
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.027361
HLA-A major histocompatibility complex, class I, A -0.0267921
FTH1 ferritin, heavy polypeptide 1 -0.0261289
GOLPH3L golgi phosphoprotein 3-like -0.0261273
GRK3 G protein-coupled receptor kinase 3 -0.0259334
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0255022
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0254334
MT2A metallothionein 2A -0.0252487
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0249672
DYNC2I1 dynein 2 intermediate chain 1 -0.0248767
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.024748
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.0247221
CALR calreticulin -0.0237516
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0234585
ZNF395 zinc finger protein 395 -0.023356
IGFBP3 insulin-like growth factor binding protein 3 -0.0232961
PERP PERP, TP53 apoptosis effector -0.0232078
ESRP1 epithelial splicing regulatory protein 1 -0.0231901
KLHL24 kelch-like family member 24 -0.0230004
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0226002
BACE2 beta-site APP-cleaving enzyme 2 -0.0222718
CANX calnexin -0.0222568
OGA O-GlcNAcase -0.0221331
PDK3 pyruvate dehydrogenase kinase, isozyme 3 -0.0219331
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0218408
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0217623
AGR2 anterior gradient 2 -0.0215553
YEATS2 YEATS domain containing 2 -0.0215475
HM13 histocompatibility (minor) 13 -0.0215469
XPO1 exportin 1 -0.0215017
KMT2C lysine (K)-specific methyltransferase 2C -0.0214902
PDIA3 protein disulfide isomerase family A, member 3 -0.021392
RPL35A ribosomal protein L35a -0.0208739
ZBTB20 zinc finger and BTB domain containing 20 -0.020786
MBNL2 muscleblind-like splicing regulator 2 -0.0206453
NUCB2 nucleobindin 2 -0.0202353
EXOC1 exocyst complex component 1 -0.0200027
AHNAK AHNAK nucleoprotein -0.0198366
RAB6A RAB6A, member RAS oncogene family -0.0196559
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0195266
WSB1 WD repeat and SOCS box containing 1 -0.0195078
RREB1 ras responsive element binding protein 1 -0.0194254
MXI1 MAX interactor 1, dimerization protein -0.0193366
SMC4 structural maintenance of chromosomes 4 -0.0193218
CCNI cyclin I -0.0189668
ACBD3 acyl-CoA binding domain containing 3 -0.0188171
ZNF652 zinc finger protein 652 -0.0187412
HLA-E major histocompatibility complex, class I, E -0.0186153
CENPF centromere protein F, 350/400kDa -0.0185667
PDIA6 protein disulfide isomerase family A, member 6 -0.018514
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.018464
PDE8A phosphodiesterase 8A -0.0183922
CTSD cathepsin D -0.0179827
MEF2A myocyte enhancer factor 2A -0.0179526
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0179429
TPM4 tropomyosin 4 -0.0179123
IRS2 insulin receptor substrate 2 -0.0178823
H3-3B H3.3 histone B -0.0178732
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0178701
AP1G1 adaptor-related protein complex 1, gamma 1 subunit -0.0178576
PIAS1 protein inhibitor of activated STAT, 1 -0.0177951
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0175788
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0174812
RB1 retinoblastoma 1 -0.0172711
NAP1L1 nucleosome assembly protein 1-like 1 -0.0171374
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0170645
DIAPH3 diaphanous-related formin 3 -0.0169387
NIPSNAP2 nipsnap homolog 2 -0.0166703
YTHDC1 YTH domain containing 1 -0.0166488
KDM3A lysine (K)-specific demethylase 3A -0.0165635
HLA-B major histocompatibility complex, class I, B -0.016527
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0165136
NPEPPS aminopeptidase puromycin sensitive -0.016449
EPB41L4B erythrocyte membrane protein band 4.1 like 4B -0.0162691
LASP1 LIM and SH3 protein 1 -0.016252
ZBTB7A zinc finger and BTB domain containing 7A -0.0161571
FKBP9 FK506 binding protein 9, 63 kDa -0.0161334