Pemigatinib_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pemigatinib perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pemigatinib_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.192126
TRIO trio Rho guanine nucleotide exchange factor 0.167201
FNDC3B fibronectin type III domain containing 3B 0.164837
NDRG1 N-myc downstream regulated 1 0.15011
CADM1 cell adhesion molecule 1 0.140352
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.136318
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.113432
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0879277
CXCL8 chemokine (C-X-C motif) ligand 8 0.0811803
SOD2 superoxide dismutase 2, mitochondrial 0.0719206
PTK2 protein tyrosine kinase 2 0.0705575
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0690711
EGFR epidermal growth factor receptor 0.068831
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0685671
RIGI RNA sensor RIG-I 0.0659628
LOXL2 lysyl oxidase-like 2 0.0640339
FMNL2 formin-like 2 0.0600136
JARID2 jumonji, AT rich interactive domain 2 0.059663
SP100 SP100 nuclear antigen 0.0589553
PICALM phosphatidylinositol binding clathrin assembly protein 0.0586855
TTC3 tetratricopeptide repeat domain 3 0.0552255
RAP1B RAP1B, member of RAS oncogene family 0.0549603
FNIP1 folliculin interacting protein 1 0.0525948
MRTFA myocardin related transcription factor A 0.0516129
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0513397
ESYT2 extended synaptotagmin-like protein 2 0.0507434
RBMS3 RNA binding motif, single stranded interacting protein 3 0.049495
ADAM17 ADAM metallopeptidase domain 17 0.0489946
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0488262
TFG TRK-fused gene 0.0470676
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0468474
SEC24A SEC24 family member A 0.0459498
VCAN versican 0.0448444
GOLGB1 golgin B1 0.0447488
NAMPT nicotinamide phosphoribosyltransferase 0.0436788
SPAG9 sperm associated antigen 9 0.0432583
ATP13A3 ATPase type 13A3 0.0431285
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0422153
KDM3A lysine (K)-specific demethylase 3A 0.0419298
PDE10A phosphodiesterase 10A 0.0414844
EXT1 exostosin glycosyltransferase 1 0.0403328
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0393567
COG5 component of oligomeric golgi complex 5 0.0393107
YEATS2 YEATS domain containing 2 0.0392045
DOCK7 dedicator of cytokinesis 7 0.0390613
ANKRD11 ankyrin repeat domain 11 0.0383777
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0370635
HILPDA hypoxia inducible lipid droplet-associated 0.037049
NOP58 NOP58 ribonucleoprotein 0.0367433
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0364001
GOLGA4 golgin A4 0.0363397
ZSWIM6 zinc finger, SWIM-type containing 6 0.0362731
ATP11B ATPase, class VI, type 11B 0.0361339
BIRC6 baculoviral IAP repeat containing 6 0.0360729
DYM dymeclin 0.0353431
CCNY cyclin Y 0.0351928
RAB1A RAB1A, member RAS oncogene family 0.0351783
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0351781
MAP4 microtubule-associated protein 4 0.0344934
SFPQ splicing factor proline/glutamine-rich 0.0340247
ATXN1 ataxin 1 0.0338682
SQSTM1 sequestosome 1 0.0335311
MARCHF6 membrane associated ring-CH-type finger 6 0.033361
IL6ST interleukin 6 signal transducer 0.0332885
RSAD2 radical S-adenosyl methionine domain containing 2 0.0330085
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0328308
SETD5 SET domain containing 5 0.032822
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0322991
SEC24D SEC24 family member D 0.032205
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0318297
ZEB1 zinc finger E-box binding homeobox 1 0.0317609
CLINT1 clathrin interactor 1 0.0314407
PARD3 par-3 family cell polarity regulator 0.0311676
OSBPL9 oxysterol binding protein-like 9 0.0307793
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0305981
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0303787
ECPAS Ecm29 proteasome adaptor and scaffold 0.0303365
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0300653
ZFC3H1 zinc finger, C3H1-type containing 0.030047
UBA6 ubiquitin-like modifier activating enzyme 6 0.0298979
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 0.0295505
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0294974
ZNF292 zinc finger protein 292 0.0291873
KDM2A lysine (K)-specific demethylase 2A 0.028983
WARS1 tryptophanyl-tRNA synthetase 1 0.0289001
BTBD9 BTB (POZ) domain containing 9 0.0287062
DENND5A DENN/MADD domain containing 5A 0.0284474
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0282259
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0281873
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0281588
SUCO SUN domain containing ossification factor 0.0281165
HM13 histocompatibility (minor) 13 0.0277878
BACE2 beta-site APP-cleaving enzyme 2 0.0276576
VMP1 vacuole membrane protein 1 0.0276531
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0274216
FAM91A1 family with sequence similarity 91, member A1 0.027059
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0269377
RASA2 RAS p21 protein activator 2 0.0267187
LPP LIM domain containing preferred translocation partner in lipoma 0.0266507
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0266149

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.0919764
CD44 CD44 molecule (Indian blood group) -0.0902506
COL1A1 collagen, type I, alpha 1 -0.0899558
HMGA2 high mobility group AT-hook 2 -0.0808759
COL1A2 collagen, type I, alpha 2 -0.0626095
TM4SF1 transmembrane 4 L six family member 1 -0.0563071
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0553426
DPYD dihydropyrimidine dehydrogenase -0.0534678
COL6A3 collagen, type VI, alpha 3 -0.0515725
STC1 stanniocalcin 1 -0.0505314
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0504387
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0471621
GLIS3 GLIS family zinc finger 3 -0.0446984
NAV1 neuron navigator 1 -0.0361229
ANTXR2 anthrax toxin receptor 2 -0.0355745
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0351269
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0328813
TPM4 tropomyosin 4 -0.0301378
FBN1 fibrillin 1 -0.0297728
PDE4D phosphodiesterase 4D, cAMP-specific -0.0290586
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0287743
OSMR oncostatin M receptor -0.0286726
TMSB10 thymosin beta 10 -0.0283203
WWTR1 WW domain containing transcription regulator 1 -0.0279962
NKAIN3 Na+/K+ transporting ATPase interacting 3 -0.0278102
PIEZO2 piezo-type mechanosensitive ion channel component 2 -0.0275412
NRP1 neuropilin 1 -0.0275125
CDH13 cadherin 13 -0.027065
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0268728
ACTG1 actin gamma 1 -0.0265471
FTL ferritin, light polypeptide -0.0247644
MT2A metallothionein 2A -0.0240702
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0240534
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0236746
FRMD4A FERM domain containing 4A -0.023585
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0232273
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0230364
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0227323
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0225318
NREP neuronal regeneration related protein -0.0224695
MAP1B microtubule-associated protein 1B -0.0224412
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0219858
HLA-B major histocompatibility complex, class I, B -0.0216918
PALLD palladin, cytoskeletal associated protein -0.0215781
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0214056
MYO9A myosin IXA -0.0213392
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0213089
PRSS23 protease, serine, 23 -0.0212278
COL3A1 collagen, type III, alpha 1 -0.0206804
FN1 fibronectin 1 -0.0206063
NALF1 NALCN channel auxiliary factor 1 -0.0196003
EGR1 early growth response 1 -0.0195085
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0193065
EHBP1 EH domain binding protein 1 -0.0189818
CALD1 caldesmon 1 -0.0188816
CENPF centromere protein F, 350/400kDa -0.0187227
ZFHX3 zinc finger homeobox 3 -0.0184562
KLF6 Kruppel-like factor 6 -0.0179667
COL6A1 collagen, type VI, alpha 1 -0.0177243
MKI67 marker of proliferation Ki-67 -0.0173907
POSTN periostin, osteoblast specific factor -0.017234
DSTN destrin (actin depolymerizing factor) -0.0171974
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0167608
COL4A2 collagen, type IV, alpha 2 -0.0167044
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0164208
COL6A2 collagen, type VI, alpha 2 -0.0163342
MAML2 mastermind-like 2 (Drosophila) -0.0163072
ATXN10 ataxin 10 -0.016302
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0162197
SAMD4A sterile alpha motif domain containing 4A -0.0162111
NT5E 5'-nucleotidase, ecto (CD73) -0.0161702
TPT1 tumor protein, translationally-controlled 1 -0.015882
DST dystonin -0.0154429
FBXL13 F-box and leucine-rich repeat protein 13 -0.015293
TENM3 teneurin transmembrane protein 3 -0.0151697
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 -0.0151281
RPS24 ribosomal protein S24 -0.015118
MYLK myosin light chain kinase -0.0148422
ABI3BP ABI family, member 3 (NESH) binding protein -0.0147808
F3 coagulation factor III (thromboplastin, tissue factor) -0.0146839
KDM4C lysine (K)-specific demethylase 4C -0.0146806
CCDC88A coiled-coil domain containing 88A -0.0146314
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0146296
SULF1 sulfatase 1 -0.0142597
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0140123
PPARA peroxisome proliferator-activated receptor alpha -0.013762
TMSB4X thymosin beta 4, X-linked -0.0137137
MTSS1 metastasis suppressor 1 -0.0135316
ANKRD12 ankyrin repeat domain 12 -0.0134583
LOC112694756 uncharaterized LOC112694756 -0.0134484
GPR141 G protein-coupled receptor 141 -0.0131963
EMP1 epithelial membrane protein 1 -0.0131951
PYGL phosphorylase, glycogen, liver -0.0131792
ATM ATM serine/threonine kinase -0.0130606
IFI44 interferon-induced protein 44 -0.0130172
ADAM12 ADAM metallopeptidase domain 12 -0.0129748
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0128472
LMO4 LIM domain only 4 -0.0127122
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.012675
HMCN1 hemicentin 1 -0.0125838