Pemigatinib_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pemigatinib perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pemigatinib_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EXT1 exostosin glycosyltransferase 1 0.136212
MBNL2 muscleblind-like splicing regulator 2 0.134197
LMO7 LIM domain 7 0.0920993
SIK3 SIK family kinase 3 0.0780347
GDA guanine deaminase 0.0706534
JMJD1C jumonji domain containing 1C 0.0664982
EIF1 eukaryotic translation initiation factor 1 0.0645751
ANXA1 annexin A1 0.0636235
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0598372
COBL cordon-bleu WH2 repeat protein 0.0591758
MACC1 metastasis associated in colon cancer 1 0.0580862
ZFAND3 zinc finger, AN1-type domain 3 0.0516654
ARHGAP42 Rho GTPase activating protein 42 0.0498227
B2M beta-2-microglobulin 0.0496673
CLTC clathrin, heavy chain (Hc) 0.0494922
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0478445
SEC31A SEC31 homolog A (S. cerevisiae) 0.0477599
RAB7A RAB7A, member RAS oncogene family 0.047595
TES testin LIM domain protein 0.0450111
EIF4A2 eukaryotic translation initiation factor 4A2 0.0442378
AKAP13 A kinase (PRKA) anchor protein 13 0.0438934
TXNRD1 thioredoxin reductase 1 0.0432068
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0430099
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.04229
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0407025
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0405101
EPS8 epidermal growth factor receptor pathway substrate 8 0.0403756
KLHL29 kelch-like family member 29 0.0401703
COG5 component of oligomeric golgi complex 5 0.039839
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0394558
RNF213 ring finger protein 213 0.0392325
FRMD5 FERM domain containing 5 0.0390663
ETNK1 ethanolamine kinase 1 0.0387704
TMEM106B transmembrane protein 106B 0.0386869
GCLC glutamate-cysteine ligase, catalytic subunit 0.0379491
TMC5 transmembrane channel-like 5 0.0377655
PIBF1 progesterone immunomodulatory binding factor 1 0.0374188
TXNIP thioredoxin interacting protein 0.0368942
APLP2 amyloid beta (A4) precursor-like protein 2 0.0354197
INO80 INO80 complex subunit 0.0351846
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0351526
FNIP1 folliculin interacting protein 1 0.0349598
AHR aryl hydrocarbon receptor 0.0348825
DENND4A DENN/MADD domain containing 4A 0.0346236
MYOF myoferlin 0.0344588
EZR ezrin 0.0343666
SQSTM1 sequestosome 1 0.0343054
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.034302
RFX2 regulatory factor X, 2 (influences HLA class II expression) 0.0339703
SLC39A11 solute carrier family 39, member 11 0.0335537
MON2 MON2 homolog (S. cerevisiae) 0.0332519
VMP1 vacuole membrane protein 1 0.0330631
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0329961
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0328076
LCOR ligand dependent nuclear receptor corepressor 0.0327412
PDIA3 protein disulfide isomerase family A, member 3 0.0326656
MYO1E myosin IE 0.0325879
ADGRG6 adhesion G protein-coupled receptor G6 0.032366
PTEN phosphatase and tensin homolog 0.0322197
SLC38A2 solute carrier family 38, member 2 0.0319762
NDFIP2 Nedd4 family interacting protein 2 0.0314679
AGR3 anterior gradient 3 0.0312127
IARS1 isoleucyl-tRNA synthetase 1 0.0308216
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0306963
CCNH cyclin H 0.0303791
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0302614
CYSTM1 cysteine-rich transmembrane module containing 1 0.0299071
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.029904
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0297664
PTPRK protein tyrosine phosphatase, receptor type, K 0.0295715
SLMAP sarcolemma associated protein 0.0295107
GPHN gephyrin 0.0293127
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0292228
ARPP19 cAMP-regulated phosphoprotein, 19kDa 0.0291092
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0283868
NFIB nuclear factor I/B 0.0280315
ATF5 activating transcription factor 5 0.0279638
KRT17 keratin 17, type I 0.0279334
RAB1A RAB1A, member RAS oncogene family 0.0277285
COPA coatomer protein complex, subunit alpha 0.0277138
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.027386
WDR43 WD repeat domain 43 0.027241
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0271687
ANKRD12 ankyrin repeat domain 12 0.0268889
HKDC1 hexokinase domain containing 1 0.0266929
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0266924
BRD2 bromodomain containing 2 0.026582
LURAP1L leucine rich adaptor protein 1-like 0.0265692
EIF2A eukaryotic translation initiation factor 2A, 65kDa 0.0265351
PCM1 pericentriolar material 1 0.0260953
TCEA1 transcription elongation factor A (SII), 1 0.0260812
HM13 histocompatibility (minor) 13 0.0258443
USP53 ubiquitin specific peptidase 53 0.0256815
RNF111 ring finger protein 111 0.0254608
ZNF148 zinc finger protein 148 0.0253014
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0252763
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0251265
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 0.0251035
USP9X ubiquitin specific peptidase 9, X-linked 0.025091
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 0.0250842

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.244713
FGFR2 fibroblast growth factor receptor 2 -0.241898
CEMIP cell migration inducing protein, hyaluronan binding -0.171979
MAML2 mastermind-like 2 (Drosophila) -0.102843
GMDS GDP-mannose 4,6-dehydratase -0.0883094
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0815321
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0706362
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0674532
TPT1 tumor protein, translationally-controlled 1 -0.0611654
CDK6 cyclin-dependent kinase 6 -0.0578466
TNIK TRAF2 and NCK interacting kinase -0.053149
TMSB10 thymosin beta 10 -0.0521092
EHBP1 EH domain binding protein 1 -0.050873
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0501831
PDIA4 protein disulfide isomerase family A, member 4 -0.0482244
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0481542
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0448289
KRT18 keratin 18, type I -0.0427251
CANX calnexin -0.0425897
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0417711
NDRG1 N-myc downstream regulated 1 -0.0398246
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0398015
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0396553
ANKRD10 ankyrin repeat domain 10 -0.0395741
BACE2 beta-site APP-cleaving enzyme 2 -0.0392388
RRBP1 ribosome binding protein 1 -0.0386165
LAMB3 laminin, beta 3 -0.0378591
HLA-C major histocompatibility complex, class I, C -0.0372869
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0369668
ANO1 anoctamin 1, calcium activated chloride channel -0.0364988
HLA-B major histocompatibility complex, class I, B -0.0358519
PRSS3 protease, serine, 3 -0.035717
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0351602
FLNB filamin B, beta -0.0350427
PTK2 protein tyrosine kinase 2 -0.0348163
PRKCA protein kinase C, alpha -0.0340082
AUTS2 autism susceptibility candidate 2 -0.0337411
TFRC transferrin receptor -0.0334431
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0331231
ACTG1 actin gamma 1 -0.0329951
ACACA acetyl-CoA carboxylase alpha -0.0322742
WDR45B WD repeat domain 45B -0.0320054
AHNAK AHNAK nucleoprotein -0.031873
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0315884
LPP LIM domain containing preferred translocation partner in lipoma -0.031538
RBM47 RNA binding motif protein 47 -0.0304502
SPIDR scaffolding protein involved in DNA repair -0.0304046
S100A6 S100 calcium binding protein A6 -0.0302868
WSB1 WD repeat and SOCS box containing 1 -0.030197
CTBP2 C-terminal binding protein 2 -0.0298434
DYM dymeclin -0.0297471
RSRC1 arginine/serine-rich coiled-coil 1 -0.0295429
ARHGAP6 Rho GTPase activating protein 6 -0.0287544
AHNAK2 AHNAK nucleoprotein 2 -0.0283581
PPP4R3B protein phosphatase 4 regulatory subunit 3B -0.0281297
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0279808
SULF2 sulfatase 2 -0.0279768
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0278748
SOX4 SRY (sex determining region Y)-box 4 -0.0276581
ONECUT3 one cut homeobox 3 -0.0274732
RIN2 Ras and Rab interactor 2 -0.0274618
ANKRD11 ankyrin repeat domain 11 -0.0272302
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0270078
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 -0.0269687
TMPRSS4 transmembrane protease, serine 4 -0.0267431
PPARG peroxisome proliferator-activated receptor gamma -0.0266528
RBM39 RNA binding motif protein 39 -0.02659
ZFAND6 zinc finger, AN1-type domain 6 -0.0265389
ACSL1 acyl-CoA synthetase long-chain family member 1 -0.0263665
CALR calreticulin -0.0263293
HLA-A major histocompatibility complex, class I, A -0.0262976
PGK1 phosphoglycerate kinase 1 -0.0259592
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 -0.0256879
AGR2 anterior gradient 2 -0.0255261
RB1CC1 RB1-inducible coiled-coil 1 -0.0252113
TNS4 tensin 4 -0.0243127
TBC1D5 TBC1 domain family, member 5 -0.0240989
INSIG1 insulin induced gene 1 -0.0240951
PKP4 plakophilin 4 -0.0240454
EYA2 EYA transcriptional coactivator and phosphatase 2 -0.023984
RABGAP1L RAB GTPase activating protein 1-like -0.023947
ETV6 ets variant 6 -0.0238511
NCOR2 nuclear receptor corepressor 2 -0.0234009
BTBD9 BTB (POZ) domain containing 9 -0.0233421
KLK10 kallikrein-related peptidase 10 -0.0232077
DSG2 desmoglein 2 -0.0231034
RPL34 ribosomal protein L34 -0.023001
PKM pyruvate kinase, muscle -0.0228195
CAPZB capping protein (actin filament) muscle Z-line, beta -0.022717
LAMA4 laminin, alpha 4 -0.0226358
KLF13 Kruppel-like factor 13 -0.0226231
KRT8 keratin 8, type II -0.0225808
FMN1 formin 1 -0.0225065
ANLN anillin, actin binding protein -0.0224682
MYL12B myosin, light chain 12B, regulatory -0.0224525
SDC4 syndecan 4 -0.0219058
ZFHX3 zinc finger homeobox 3 -0.0215874
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0213881
CUX1 cut-like homeobox 1 -0.0211831
RPS3 ribosomal protein S3 -0.0211561