Pemigatinib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pemigatinib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pemigatinib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.222007
IGFBP3 insulin-like growth factor binding protein 3 0.173372
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.137538
ZFAND3 zinc finger, AN1-type domain 3 0.120535
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.119427
FNDC3B fibronectin type III domain containing 3B 0.082007
FTH1 ferritin, heavy polypeptide 1 0.0752382
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0742802
RAB1A RAB1A, member RAS oncogene family 0.0657611
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.064834
EIF1 eukaryotic translation initiation factor 1 0.0640041
RBM25 RNA binding motif protein 25 0.0638063
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0626281
WAC WW domain containing adaptor with coiled-coil 0.0625108
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0620354
COPA coatomer protein complex, subunit alpha 0.0604123
SOD2 superoxide dismutase 2, mitochondrial 0.0594563
BIRC6 baculoviral IAP repeat containing 6 0.057901
GLG1 golgi glycoprotein 1 0.0576729
RBM39 RNA binding motif protein 39 0.0570594
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0550169
ELL2 elongation factor, RNA polymerase II, 2 0.0541986
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0537538
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0534481
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.053292
CXCL8 chemokine (C-X-C motif) ligand 8 0.052673
LDHA lactate dehydrogenase A 0.0515008
SEC31A SEC31 homolog A (S. cerevisiae) 0.0511038
CCNL1 cyclin L1 0.0497464
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0492549
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0491311
NF1 neurofibromin 1 0.04909
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0476754
HLA-B major histocompatibility complex, class I, B 0.0470069
TPD52 tumor protein D52 0.0463765
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0461446
EZR ezrin 0.0455108
KTN1 kinectin 1 (kinesin receptor) 0.0454561
CUL3 cullin 3 0.0453934
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0434901
PSEN1 presenilin 1 0.0428133
SLMAP sarcolemma associated protein 0.042707
FAM107B family with sequence similarity 107, member B 0.0423921
GOLGA4 golgin A4 0.0421617
FLNB filamin B, beta 0.0418332
GLS2 glutaminase 2 (liver, mitochondrial) 0.0417372
BRD2 bromodomain containing 2 0.041356
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0409074
ZEB1 zinc finger E-box binding homeobox 1 0.0408722
USP36 ubiquitin specific peptidase 36 0.0408622
IL6 interleukin 6 0.0404729
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.040389
ATP13A3 ATPase type 13A3 0.0401337
NRG1 neuregulin 1 0.0394549
PRRC2C proline-rich coiled-coil 2C 0.0393104
COG5 component of oligomeric golgi complex 5 0.0388501
NEK7 NIMA-related kinase 7 0.0384879
MED13 mediator complex subunit 13 0.0382992
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0379582
LAMC2 laminin, gamma 2 0.0373782
YME1L1 YME1-like 1 ATPase 0.0371809
RAB7A RAB7A, member RAS oncogene family 0.0369947
AKAP12 A kinase (PRKA) anchor protein 12 0.0368445
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.036796
PUM1 pumilio RNA-binding family member 1 0.0364008
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0362676
RUNX1 runt-related transcription factor 1 0.0361608
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.035942
SIK3 SIK family kinase 3 0.0353723
ANKHD1 ankyrin repeat and KH domain containing 1 0.0351028
MORF4L2 mortality factor 4 like 2 0.0348659
CDC73 cell division cycle 73 0.0339425
TRIP12 thyroid hormone receptor interactor 12 0.0338847
USP3 ubiquitin specific peptidase 3 0.0336921
KIF13A kinesin family member 13A 0.0334805
PDIA3 protein disulfide isomerase family A, member 3 0.0333622
GDA guanine deaminase 0.033291
EPG5 ectopic P-granules autophagy protein 5 homolog (C. elegans) 0.0330863
NPC1 Niemann-Pick disease, type C1 0.0330794
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0330024
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.032938
SRP54 signal recognition particle 54kDa 0.0328584
INO80 INO80 complex subunit 0.0328176
KDM2A lysine (K)-specific demethylase 2A 0.0326391
TENT5A terminal nucleotidyltransferase 5A 0.0324106
RNF145 ring finger protein 145 0.0320921
FOCAD focadhesin 0.0319468
MACF1 microtubule-actin crosslinking factor 1 0.031676
TPI1 triosephosphate isomerase 1 0.0316615
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0315074
MCL1 myeloid cell leukemia 1 0.0314942
SCFD1 sec1 family domain containing 1 0.0312535
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 0.0311601
CDCP1 CUB domain containing protein 1 0.0310193
CDK13 cyclin-dependent kinase 13 0.0308524
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0308457
PUM2 pumilio RNA-binding family member 2 0.0306621
SBF2 SET binding factor 2 0.0306137
PHF20 PHD finger protein 20 0.0303243
TRA2A transformer 2 alpha homolog (Drosophila) 0.0300274

decreased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific -0.219754
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.142784
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0735854
CMIP c-Maf inducing protein -0.073228
RAD51B RAD51 paralog B -0.0728076
THSD4 thrombospondin, type I, domain containing 4 -0.0687467
FTL ferritin, light polypeptide -0.0637537
BICC1 BicC family RNA binding protein 1 -0.0619738
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0581454
SLC38A2 solute carrier family 38, member 2 -0.0544001
NEGR1 neuronal growth regulator 1 -0.0537044
BABAM2 BRISC and BRCA1 A complex member 2 -0.0512464
PTMA prothymosin, alpha -0.0494819
DST dystonin -0.0481033
MAML3 mastermind-like 3 (Drosophila) -0.0478565
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0478228
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0463604
TM4SF1 transmembrane 4 L six family member 1 -0.0449022
EXOC4 exocyst complex component 4 -0.0427914
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0416371
EFNA5 ephrin-A5 -0.0395755
ACTG1 actin gamma 1 -0.0384744
PM20D1 peptidase M20 domain containing 1 -0.0382083
AHNAK AHNAK nucleoprotein -0.0379107
HMGA2 high mobility group AT-hook 2 -0.0367078
DOCK4 dedicator of cytokinesis 4 -0.0362445
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0342745
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.033485
UTRN utrophin -0.0333427
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0332794
LRMDA leucine rich melanocyte differentiation associated -0.0330188
EHBP1 EH domain binding protein 1 -0.0319868
AK1 adenylate kinase 1 -0.0318111
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0316746
TPM3 tropomyosin 3 -0.0315876
PDE8A phosphodiesterase 8A -0.0313251
SMAD3 SMAD family member 3 -0.0310799
GLIS3 GLIS family zinc finger 3 -0.0309866
TPT1 tumor protein, translationally-controlled 1 -0.0304954
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0294197
FRMD5 FERM domain containing 5 -0.0292416
CUX1 cut-like homeobox 1 -0.0284781
TPM1 tropomyosin 1 (alpha) -0.0283879
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.027627
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.02728
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0270612
TTC28 tetratricopeptide repeat domain 28 -0.0265117
CHD9 chromodomain helicase DNA binding protein 9 -0.0264622
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0260414
AHR aryl hydrocarbon receptor -0.0255694
HDAC9 histone deacetylase 9 -0.0252602
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0246894
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0245646
CNKSR3 CNKSR family member 3 -0.0242218
NCEH1 neutral cholesterol ester hydrolase 1 -0.0241023
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0238555
FLNA filamin A, alpha -0.0235388
PKM pyruvate kinase, muscle -0.0233035
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0232681
P3H2 prolyl 3-hydroxylase 2 -0.0231163
CAVIN1 caveolae associated protein 1 -0.0230803
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 -0.0230173
DIAPH3 diaphanous-related formin 3 -0.0227249
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.022668
IGF1R insulin-like growth factor 1 receptor -0.022658
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0224974
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0218196
WDPCP WD repeat containing planar cell polarity effector -0.0216778
YBX1 Y box binding protein 1 -0.0215527
RTN4 reticulon 4 -0.0214237
RNF213 ring finger protein 213 -0.0213381
STC1 stanniocalcin 1 -0.0213252
DNMBP dynamin binding protein -0.0211452
TMEM123 transmembrane protein 123 -0.0210239
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0209743
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit -0.0205395
WWOX WW domain containing oxidoreductase -0.0203697
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0202944
ACACA acetyl-CoA carboxylase alpha -0.0198634
YBX3 Y box binding protein 3 -0.0191659
PRR16 proline rich 16 -0.0191134
BICD1 bicaudal D homolog 1 (Drosophila) -0.0190311
TRIO trio Rho guanine nucleotide exchange factor -0.0189955
RGS20 regulator of G-protein signaling 20 -0.0188138
ATM ATM serine/threonine kinase -0.0187924
RRM2 ribonucleotide reductase M2 -0.0187548
SDCCAG8 serologically defined colon cancer antigen 8 -0.0185846
ADGRG6 adhesion G protein-coupled receptor G6 -0.0185029
HMGA1 high mobility group AT-hook 1 -0.0184716
FGB fibrinogen beta chain -0.0184072
MYH9 myosin, heavy chain 9, non-muscle -0.0183167
ZBTB20 zinc finger and BTB domain containing 20 -0.01823
CANX calnexin -0.0182152
CCDC7 coiled-coil domain containing 7 -0.0179879
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0179347
RPS27A ribosomal protein S27a -0.0179294
JAZF1 JAZF zinc finger 1 -0.0178641
PSD3 pleckstrin and Sec7 domain containing 3 -0.0178477
LDHB lactate dehydrogenase B -0.0177919
BPTF bromodomain PHD finger transcription factor -0.0177886