Pemigatinib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pemigatinib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pemigatinib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.107108
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0893801
HDAC9 histone deacetylase 9 0.0851905
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0805692
FNDC3B fibronectin type III domain containing 3B 0.0805385
COL11A1 collagen, type XI, alpha 1 0.0780196
ITGAV integrin, alpha V 0.0731184
PLPP1 phospholipid phosphatase 1 0.0693033
GREB1L growth regulation by estrogen in breast cancer-like 0.0681759
TTC3 tetratricopeptide repeat domain 3 0.063621
TENM3 teneurin transmembrane protein 3 0.0604109
COL5A2 collagen, type V, alpha 2 0.0604073
ZFAND3 zinc finger, AN1-type domain 3 0.0569836
CDH19 cadherin 19, type 2 0.053216
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0520652
PEG10 paternally expressed 10 0.0515289
PLCB4 phospholipase C, beta 4 0.048636
WNT5B wingless-type MMTV integration site family, member 5B 0.0472786
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0470368
PCLO piccolo presynaptic cytomatrix protein 0.0457474
ARHGAP24 Rho GTPase activating protein 24 0.0457306
TRIM2 tripartite motif containing 2 0.0440977
CDH4 cadherin 4, type 1, R-cadherin (retinal) 0.0433809
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0430806
DST dystonin 0.0422404
NEBL nebulette 0.0418814
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0417586
GPC4 glypican 4 0.0412581
PGAP1 post-GPI attachment to proteins 1 0.0410594
WNK1 WNK lysine deficient protein kinase 1 0.0403883
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0397401
SAMD4A sterile alpha motif domain containing 4A 0.0395858
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0390782
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0372267
SLIT2 slit homolog 2 (Drosophila) 0.0371477
PHIP pleckstrin homology domain interacting protein 0.0369345
MYO9A myosin IXA 0.0360718
TIAM1 T-cell lymphoma invasion and metastasis 1 0.0360093
SOX6 SRY (sex determining region Y)-box 6 0.0358877
PCDH7 protocadherin 7 0.0357014
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0355025
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0352481
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0348762
NTM neurotrimin 0.0346194
TXNRD1 thioredoxin reductase 1 0.0342252
GLS2 glutaminase 2 (liver, mitochondrial) 0.0341589
MED13L mediator complex subunit 13-like 0.0330515
CSNK1A1 casein kinase 1, alpha 1 0.0329843
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0322284
COL3A1 collagen, type III, alpha 1 0.0320057
OLA1 Obg-like ATPase 1 0.0311026
ANXA5 annexin A5 0.0304364
FAM168A family with sequence similarity 168, member A 0.0302375
DOCK7 dedicator of cytokinesis 7 0.030042
EIF1 eukaryotic translation initiation factor 1 0.0294542
MECOM MDS1 and EVI1 complex locus 0.0293516
KIF5B kinesin family member 5B 0.0293161
TARS1 threonyl-tRNA synthetase 1 0.0293103
COPB1 coatomer protein complex, subunit beta 1 0.0292996
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0291871
PDGFC platelet derived growth factor C 0.0284727
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0284717
DGKD diacylglycerol kinase, delta 130kDa 0.0284677
SSBP2 single-stranded DNA binding protein 2 0.0281313
FOXP2 forkhead box P2 0.0278386
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0278239
GOLT1A golgi transport 1A 0.0275706
ADAM17 ADAM metallopeptidase domain 17 0.0271054
CDK13 cyclin-dependent kinase 13 0.0267325
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0261381
TNPO1 transportin 1 0.0260342
TBC1D5 TBC1 domain family, member 5 0.0259215
ENO1 enolase 1, (alpha) 0.0258088
RHOA ras homolog family member A 0.0256867
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0254207
RBM20 RNA binding motif protein 20 0.0253807
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.0251784
SBF2 SET binding factor 2 0.0249792
H1-0 H1.0 linker histone 0.0249103
BIRC6 baculoviral IAP repeat containing 6 0.024872
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 0.0248325
ARL8B ADP-ribosylation factor-like 8B 0.0247454
ZC3H15 zinc finger CCCH-type containing 15 0.0245894
LIN28B lin-28 homolog B (C. elegans) 0.0245817
RTN4 reticulon 4 0.0245724
GARS1 glycyl-tRNA synthetase 1 0.0245546
ACBD3 acyl-CoA binding domain containing 3 0.0244558
SRP54 signal recognition particle 54kDa 0.024422
JMJD1C jumonji domain containing 1C 0.0244026
FXR1 fragile X mental retardation, autosomal homolog 1 0.024322
MAML2 mastermind-like 2 (Drosophila) 0.0241977
PREPL prolyl endopeptidase-like 0.0240632
GPHRA golgi pH regulator A 0.0240569
ZC3H12B zinc finger CCCH-type containing 12B 0.0238448
KMT2A lysine (K)-specific methyltransferase 2A 0.0237141
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0236765
ELAVL3 ELAV like neuron-specific RNA binding protein 3 0.023645
YEATS2 YEATS domain containing 2 0.0235684
CHD9 chromodomain helicase DNA binding protein 9 0.0235097
SNX6 sorting nexin 6 0.0233665

decreased expression

Symbol Name Standardized Value
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0894001
CADM2 cell adhesion molecule 2 -0.0559436
LRRC4C leucine rich repeat containing 4C -0.047309
PTMA prothymosin, alpha -0.0459077
ADGRV1 adhesion G protein-coupled receptor V1 -0.0447481
TMSB10 thymosin beta 10 -0.0334116
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0329652
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0289513
SPAG9 sperm associated antigen 9 -0.0288195
NRG1 neuregulin 1 -0.0281135
WSB1 WD repeat and SOCS box containing 1 -0.0279905
TRIO trio Rho guanine nucleotide exchange factor -0.0279403
NPAS3 neuronal PAS domain protein 3 -0.0276283
ANKRD33B ankyrin repeat domain 33B -0.0265172
RPL37 ribosomal protein L37 -0.026149
PCDH9 protocadherin 9 -0.0254818
NCAM2 neural cell adhesion molecule 2 -0.0250099
BAZ1A bromodomain adjacent to zinc finger domain, 1A -0.0243058
DMD dystrophin -0.0242488
TPT1 tumor protein, translationally-controlled 1 -0.0234614
OSBPL10 oxysterol binding protein-like 10 -0.0233266
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0221139
PARD3B par-3 family cell polarity regulator beta -0.021745
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0207052
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0205307
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0205293
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.020511
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0201419
RPS13 ribosomal protein S13 -0.0200977
ANKRD17 ankyrin repeat domain 17 -0.0199669
GNAS GNAS complex locus -0.0199305
UBE2H ubiquitin-conjugating enzyme E2H -0.0198501
HDAC8 histone deacetylase 8 -0.0194584
RPL19 ribosomal protein L19 -0.0190377
CAVIN1 caveolae associated protein 1 -0.018824
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0187548
ATXN2 ataxin 2 -0.0185527
SLC30A8 solute carrier family 30 (zinc transporter), member 8 -0.0184834
SOX5 SRY (sex determining region Y)-box 5 -0.018101
SIK2 salt-inducible kinase 2 -0.0180724
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0180432
AKAP12 A kinase (PRKA) anchor protein 12 -0.0177625
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0175266
NCOR2 nuclear receptor corepressor 2 -0.0175066
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B -0.0174518
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0173263
RBM33 RNA binding motif protein 33 -0.0168572
ACTG1 actin gamma 1 -0.0168273
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 -0.016691
OGA O-GlcNAcase -0.016614
KCTD16 potassium channel tetramerization domain containing 16 -0.0165403
ENAH enabled homolog (Drosophila) -0.0164217
RPL15 ribosomal protein L15 -0.0162974
ELOF1 elongation factor 1 homolog (S. cerevisiae) -0.0160539
ISG15 ISG15 ubiquitin-like modifier -0.0159569
URI1 URI1, prefoldin-like chaperone -0.0159286
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0158311
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.015731
PAXBP1 PAX3 and PAX7 binding protein 1 -0.0156775
TOP1 topoisomerase (DNA) I -0.0156566
FST follistatin -0.0155638
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0155564
HMGB1 high mobility group box 1 -0.0155302
RPS3 ribosomal protein S3 -0.0154626
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 -0.0154401
PNISR PNN-interacting serine/arginine-rich protein -0.0152872
SRSF11 serine/arginine-rich splicing factor 11 -0.0152036
CTBP2 C-terminal binding protein 2 -0.015133
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0150829
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0147807
PUM1 pumilio RNA-binding family member 1 -0.0147655
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0147584
CALR calreticulin -0.0147004
THOC2 THO complex 2 -0.0146573
RPS27A ribosomal protein S27a -0.0145669
LRMDA leucine rich melanocyte differentiation associated -0.0145458
RIGI RNA sensor RIG-I -0.0145366
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0145202
RPS25 ribosomal protein S25 -0.0143915
TPD52 tumor protein D52 -0.0143039
RPL38 ribosomal protein L38 -0.0142997
GOLGB1 golgin B1 -0.0142841
EXOC6B exocyst complex component 6B -0.0140816
EVI5 ecotropic viral integration site 5 -0.0140515
CENPE centromere protein E, 312kDa -0.0140103
ADGRG6 adhesion G protein-coupled receptor G6 -0.0139893
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0139482
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0138927
MCTP1 multiple C2 domains, transmembrane 1 -0.0137812
RPL11 ribosomal protein L11 -0.0137677
FOXJ3 forkhead box J3 -0.0135694
DENND4C DENN/MADD domain containing 4C -0.0135583
UBN2 ubinuclein 2 -0.0135363
CNOT4 CCR4-NOT transcription complex, subunit 4 -0.0134768
RFPL4B ret finger protein-like 4B -0.0134658
UBXN4 UBX domain protein 4 -0.0134655
GCC2 GRIP and coiled-coil domain containing 2 -0.0133153
IWS1 IWS1 homolog (S. cerevisiae) -0.0132308
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0132169
CABIN1 calcineurin binding protein 1 -0.0131892