Pemigatinib_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pemigatinib perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pemigatinib_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.191729
PDE4D phosphodiesterase 4D, cAMP-specific 0.127589
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0633278
EZR ezrin 0.0599111
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0480921
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0476424
PKM pyruvate kinase, muscle 0.0448766
PCNX1 pecanex 1 0.0435658
TCF12 transcription factor 12 0.0417039
EGFR epidermal growth factor receptor 0.0416681
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.041077
GSE1 Gse1 coiled-coil protein 0.0405143
TMEM65 transmembrane protein 65 0.0399971
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0381273
ECPAS Ecm29 proteasome adaptor and scaffold 0.0372275
ZCCHC7 zinc finger, CCHC domain containing 7 0.0364893
CAMTA1 calmodulin binding transcription activator 1 0.0363237
AHI1 Abelson helper integration site 1 0.0357822
PDGFC platelet derived growth factor C 0.0335014
NCEH1 neutral cholesterol ester hydrolase 1 0.0329846
TTC17 tetratricopeptide repeat domain 17 0.0326371
BRWD1 bromodomain and WD repeat domain containing 1 0.0314614
DOCK1 dedicator of cytokinesis 1 0.0312987
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0312235
DSCAM Down syndrome cell adhesion molecule 0.0309301
ATP9B ATPase, class II, type 9B 0.0296906
GPHN gephyrin 0.0292311
IFI16 interferon, gamma-inducible protein 16 0.0289614
BCLAF1 BCL2-associated transcription factor 1 0.0289425
POTEF POTE ankyrin domain family, member F 0.0285972
RBM26 RNA binding motif protein 26 0.0283901
IRS1 insulin receptor substrate 1 0.0279338
BRD2 bromodomain containing 2 0.027917
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.027873
KDM4C lysine (K)-specific demethylase 4C 0.0274665
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0273574
MED13L mediator complex subunit 13-like 0.0271161
CORO1C coronin, actin binding protein, 1C 0.0271044
USP47 ubiquitin specific peptidase 47 0.0263878
GLI2 GLI family zinc finger 2 0.0263284
ZC3H11A zinc finger CCCH-type containing 11A 0.0263273
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0260562
ANXA1 annexin A1 0.0256044
ZNF638 zinc finger protein 638 0.0255158
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.0252984
FOXP1 forkhead box P1 0.0248224
MYO5A myosin VA (heavy chain 12, myoxin) 0.024751
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0242068
NBAS neuroblastoma amplified sequence 0.0238208
DOCK7 dedicator of cytokinesis 7 0.0231687
SBF2 SET binding factor 2 0.0229752
ZNF438 zinc finger protein 438 0.0228252
XRN2 5'-3' exoribonuclease 2 0.0228225
UBA6 ubiquitin-like modifier activating enzyme 6 0.0226451
ZNF608 zinc finger protein 608 0.0222912
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0221185
ZNFX1 zinc finger, NFX1-type containing 1 0.0221174
FAR1 fatty acyl CoA reductase 1 0.0220508
CUL5 cullin 5 0.0220327
MAP2K5 mitogen-activated protein kinase kinase 5 0.0219422
BCAS3 breast carcinoma amplified sequence 3 0.0219043
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0217682
SPPL3 signal peptide peptidase like 3 0.0217666
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.0217146
GMDS GDP-mannose 4,6-dehydratase 0.0217108
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.021601
KLC1 kinesin light chain 1 0.0215842
FBXL17 F-box and leucine-rich repeat protein 17 0.0215483
MEMO1 mediator of cell motility 1 0.0215136
CDC42BPB CDC42 binding protein kinase beta (DMPK-like) 0.0212261
RC3H1 ring finger and CCCH-type domains 1 0.0211711
PARD3B par-3 family cell polarity regulator beta 0.0210071
FLNB filamin B, beta 0.0209279
OXCT1 3-oxoacid CoA transferase 1 0.0209067
SH3PXD2A SH3 and PX domains 2A 0.0208061
PTPRG protein tyrosine phosphatase, receptor type, G 0.0206664
FNIP1 folliculin interacting protein 1 0.0205675
ADAM10 ADAM metallopeptidase domain 10 0.0205615
ADAR adenosine deaminase, RNA-specific 0.0204898
FAM168B family with sequence similarity 168, member B 0.0204856
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0203622
BPTF bromodomain PHD finger transcription factor 0.0202275
ATM ATM serine/threonine kinase 0.020213
TRRAP transformation/transcription domain-associated protein 0.0201194
TRIP12 thyroid hormone receptor interactor 12 0.0201002
SSBP2 single-stranded DNA binding protein 2 0.0199291
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0198499
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0197782
FAT1 FAT atypical cadherin 1 0.0196662
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0196435
EPC1 enhancer of polycomb homolog 1 (Drosophila) 0.0195854
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0195003
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0194477
RFC3 replication factor C (activator 1) 3, 38kDa 0.0194383
SPRY2 sprouty homolog 2 (Drosophila) 0.0193173
SFPQ splicing factor proline/glutamine-rich 0.0192048
NDEL1 nudE neurodevelopment protein 1-like 1 0.0190923
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0190675
MLIP muscular LMNA-interacting protein 0.0190596
SENP6 SUMO1/sentrin specific peptidase 6 0.0188546

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.315432
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.27168
TPT1 tumor protein, translationally-controlled 1 -0.119797
RPS8 ribosomal protein S8 -0.10982
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.107534
RPS6 ribosomal protein S6 -0.105445
BMP10 bone morphogenetic protein 10 -0.0987175
ACTG1 actin gamma 1 -0.0856378
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0819626
DLG1 discs, large homolog 1 (Drosophila) -0.0761253
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0744459
TMSB4X thymosin beta 4, X-linked -0.0689819
RPL26 ribosomal protein L26 -0.0621998
RPLP1 ribosomal protein, large, P1 -0.0589138
RPL19 ribosomal protein L19 -0.0563173
RPL12 ribosomal protein L12 -0.055553
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.054957
RPL7A ribosomal protein L7a -0.0545036
RPL34 ribosomal protein L34 -0.0543858
ARL4C ADP-ribosylation factor-like 4C -0.0532645
RPL35A ribosomal protein L35a -0.0514829
RPL13A ribosomal protein L13a -0.0509501
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0466122
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0449549
RPLP2 ribosomal protein, large, P2 -0.0447212
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0439238
KPNB1 karyopherin (importin) beta 1 -0.0436967
HSPB1 heat shock 27kDa protein 1 -0.0432027
ENO1 enolase 1, (alpha) -0.0428625
RPL9 ribosomal protein L9 -0.0428211
SLC38A2 solute carrier family 38, member 2 -0.0427727
EBNA1BP2 EBNA1 binding protein 2 -0.0415289
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0405544
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.040405
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0393314
RPS12 ribosomal protein S12 -0.0387735
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0387225
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.038427
TM4SF1 transmembrane 4 L six family member 1 -0.0378266
RPS27A ribosomal protein S27a -0.0372965
EPS8 epidermal growth factor receptor pathway substrate 8 -0.037221
RPS19 ribosomal protein S19 -0.0368746
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0368144
RPL23 ribosomal protein L23 -0.0363256
CUX1 cut-like homeobox 1 -0.0362041
EEF2 eukaryotic translation elongation factor 2 -0.0361839
NAP1L1 nucleosome assembly protein 1-like 1 -0.0353299
RPS23 ribosomal protein S23 -0.0351719
RPLP0 ribosomal protein, large, P0 -0.035097
RPS3 ribosomal protein S3 -0.0350627
TPM4 tropomyosin 4 -0.0347373
RPL5 ribosomal protein L5 -0.0339867
RPL31 ribosomal protein L31 -0.0338489
RPS25 ribosomal protein S25 -0.0335658
RPS13 ribosomal protein S13 -0.0334004
RPL35 ribosomal protein L35 -0.033247
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.0327947
RPL37A ribosomal protein L37a -0.0327063
GNAS GNAS complex locus -0.0326883
RPL7 ribosomal protein L7 -0.0326007
RPS24 ribosomal protein S24 -0.0324156
RPL37 ribosomal protein L37 -0.0321825
RPL8 ribosomal protein L8 -0.0319066
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0316735
WSB1 WD repeat and SOCS box containing 1 -0.0314637
TMSB10 thymosin beta 10 -0.0313416
NPAS2 neuronal PAS domain protein 2 -0.0304754
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0296753
RPL36 ribosomal protein L36 -0.0296223
RACK1 receptor for activated C kinase 1 -0.0293676
RPS10 ribosomal protein S10 -0.0286713
RPL10A ribosomal protein L10a -0.0286142
RPL36A ribosomal protein L36a -0.0286109
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0281889
RSL1D1 ribosomal L1 domain containing 1 -0.0280329
RPL4 ribosomal protein L4 -0.027982
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0279692
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0278834
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0277997
HEG1 heart development protein with EGF-like domains 1 -0.027458
RPS16 ribosomal protein S16 -0.0264731
S100A9 S100 calcium binding protein A9 -0.0264002
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0263802
RPL30 ribosomal protein L30 -0.026259
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0260889
S100A10 S100 calcium binding protein A10 -0.02569
RPS11 ribosomal protein S11 -0.0256134
RPS14 ribosomal protein S14 -0.0256091
RPS29 ribosomal protein S29 -0.0255341
RPS2 ribosomal protein S2 -0.0253211
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.025313
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0252106
VIM vimentin -0.0250969
RPS21 ribosomal protein S21 -0.0250959
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0250693
FN1 fibronectin 1 -0.0245092
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0242493
CCND1 cyclin D1 -0.0241098
FTL ferritin, light polypeptide -0.0239869
RPS20 ribosomal protein S20 -0.0235994