Pemigatinib_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pemigatinib perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pemigatinib_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor 0.0637502
FNDC3B fibronectin type III domain containing 3B 0.0625267
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0564746
RBM25 RNA binding motif protein 25 0.0551904
PKM pyruvate kinase, muscle 0.0543997
ATP13A3 ATPase type 13A3 0.0504998
VIM vimentin 0.0501286
MED13 mediator complex subunit 13 0.0471018
B2M beta-2-microglobulin 0.0465077
RBM39 RNA binding motif protein 39 0.0457181
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0439778
CD44 CD44 molecule (Indian blood group) 0.0437026
TPI1 triosephosphate isomerase 1 0.0432078
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0430228
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0410291
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.039627
RPS13 ribosomal protein S13 0.0393239
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0390184
RSRC1 arginine/serine-rich coiled-coil 1 0.0386647
PNISR PNN-interacting serine/arginine-rich protein 0.0379445
UQCRB ubiquinol-cytochrome c reductase binding protein 0.0369709
LARP1 La ribonucleoprotein domain family, member 1 0.0362197
HDAC9 histone deacetylase 9 0.0361299
TBK1 TANK-binding kinase 1 0.0361204
RPL23 ribosomal protein L23 0.0361037
ANXA1 annexin A1 0.0359112
EXOC6B exocyst complex component 6B 0.0358151
ISG15 ISG15 ubiquitin-like modifier 0.0357716
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0356356
RPL35A ribosomal protein L35a 0.0350991
RUNX1 runt-related transcription factor 1 0.0347199
DERA deoxyribose-phosphate aldolase (putative) 0.0346018
FAF1 Fas (TNFRSF6) associated factor 1 0.034575
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0339197
ANKRD28 ankyrin repeat domain 28 0.0338087
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0337274
EMP1 epithelial membrane protein 1 0.0337051
TMEM87A transmembrane protein 87A 0.0335718
SVIL supervillin 0.0330889
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0323103
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0319009
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0316832
MIS18BP1 MIS18 binding protein 1 0.031531
BCLAF1 BCL2-associated transcription factor 1 0.0315289
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0314647
NSD1 nuclear receptor binding SET domain protein 1 0.031162
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0310151
BRWD1 bromodomain and WD repeat domain containing 1 0.0306199
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0301423
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0296676
HLA-A major histocompatibility complex, class I, A 0.0295766
SYNGAP1 synaptic Ras GTPase activating protein 1 0.0295486
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.02939
SENP6 SUMO1/sentrin specific peptidase 6 0.029357
SEPTIN9 septin 9 0.0292847
NUP153 nucleoporin 153kDa 0.0292272
NT5E 5'-nucleotidase, ecto (CD73) 0.0291144
PHC3 polyhomeotic homolog 3 (Drosophila) 0.029043
CLASP2 cytoplasmic linker associated protein 2 0.0288624
RAB31 RAB31, member RAS oncogene family 0.0286456
TLK1 tousled-like kinase 1 0.02837
EVI5 ecotropic viral integration site 5 0.0283119
LOC102724023 ES1 protein homolog, mitochondrial 0.0281463
SON SON DNA binding protein 0.0279515
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0278199
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0277923
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0276143
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0275839
NEK7 NIMA-related kinase 7 0.0275718
ANGPTL4 angiopoietin-like 4 0.0275101
BCAS3 breast carcinoma amplified sequence 3 0.0273504
CTNND1 catenin (cadherin-associated protein), delta 1 0.0273076
ZBTB20 zinc finger and BTB domain containing 20 0.0272888
DTNA dystrobrevin, alpha 0.0272679
PARP8 poly (ADP-ribose) polymerase family, member 8 0.0272229
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0268273
FCHSD2 FCH and double SH3 domains 2 0.02651
RPL11 ribosomal protein L11 0.0264563
ATF7IP activating transcription factor 7 interacting protein 0.0264544
ITCH itchy E3 ubiquitin protein ligase 0.0263868
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0262153
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.026206
HLA-B major histocompatibility complex, class I, B 0.0259957
RCOR1 REST corepressor 1 0.0259922
TBC1D5 TBC1 domain family, member 5 0.0259565
ITSN2 intersectin 2 0.0257627
RPLP2 ribosomal protein, large, P2 0.0257185
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0256531
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0255605
PEAK1 pseudopodium-enriched atypical kinase 1 0.025512
BARD1 BRCA1 associated RING domain 1 0.0254478
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0254207
NAMPT nicotinamide phosphoribosyltransferase 0.0253729
MKI67 marker of proliferation Ki-67 0.0253006
ETV6 ets variant 6 0.0252985
RHOBTB3 Rho-related BTB domain containing 3 0.0251863
ZNF207 zinc finger protein 207 0.02511
IL6ST interleukin 6 signal transducer 0.0250014
RAD51B RAD51 paralog B 0.0249461
RPL9 ribosomal protein L9 0.0245237

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.168364
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.164716
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0884956
INTS6 integrator complex subunit 6 -0.0882717
HMGA2 high mobility group AT-hook 2 -0.0611787
TM4SF1 transmembrane 4 L six family member 1 -0.0519512
MYOF myoferlin -0.0515725
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0501529
MAP1B microtubule-associated protein 1B -0.0484433
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase -0.0470758
ARFGEF3 ARFGEF family member 3 -0.0470096
GPC6 glypican 6 -0.0456009
ACTG1 actin gamma 1 -0.0450794
ASPH aspartate beta-hydroxylase -0.0446891
THSD4 thrombospondin, type I, domain containing 4 -0.0441308
BZW1 basic leucine zipper and W2 domains 1 -0.0440686
RAI14 retinoic acid induced 14 -0.0439902
SDC4 syndecan 4 -0.0436467
PGK1 phosphoglycerate kinase 1 -0.0425119
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0416072
CALU calumenin -0.0412006
PRELID2 PRELI domain containing 2 -0.0406737
SPDYA speedy/RINGO cell cycle regulator family member A -0.0405994
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0396725
PTMA prothymosin, alpha -0.0396299
ARHGAP5 Rho GTPase activating protein 5 -0.0390732
MACF1 microtubule-actin crosslinking factor 1 -0.0381006
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0379911
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.037414
GOLGB1 golgin B1 -0.0373341
NDRG1 N-myc downstream regulated 1 -0.0370166
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0367691
TMEM263 transmembrane protein 263 -0.0365
BIRC6 baculoviral IAP repeat containing 6 -0.0358644
ZBTB35 zinc finger and BTB domain containing 35 -0.0357973
FLNA filamin A, alpha -0.035285
CANX calnexin -0.0352632
AHNAK AHNAK nucleoprotein -0.0352221
NR4A3 nuclear receptor subfamily 4, group A, member 3 -0.034973
PICALM phosphatidylinositol binding clathrin assembly protein -0.0342911
GNAS GNAS complex locus -0.0341658
TMEM123 transmembrane protein 123 -0.0339585
ATXN1 ataxin 1 -0.0338887
SMAD2 SMAD family member 2 -0.0333256
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0323669
PODXL podocalyxin-like -0.0321255
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0319659
YBX1 Y box binding protein 1 -0.0317261
SOD2 superoxide dismutase 2, mitochondrial -0.0313795
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0312735
HM13 histocompatibility (minor) 13 -0.0312005
FLNB filamin B, beta -0.0311702
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0308277
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0306392
MCL1 myeloid cell leukemia 1 -0.0304802
FBXO11 F-box protein 11 -0.0303245
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0297755
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0296981
ADIPOR2 adiponectin receptor 2 -0.029459
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0293487
GPATCH2L G patch domain containing 2-like -0.0292577
GOLGA3 golgin A3 -0.0291158
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0286378
JARID2 jumonji, AT rich interactive domain 2 -0.0282098
ZBTB1 zinc finger and BTB domain containing 1 -0.0281961
RRBP1 ribosome binding protein 1 -0.0281755
SLC38A2 solute carrier family 38, member 2 -0.0281638
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0279628
SETX senataxin -0.0275882
TGFB1 transforming growth factor, beta 1 -0.0275605
NCEH1 neutral cholesterol ester hydrolase 1 -0.026942
FN1 fibronectin 1 -0.0268565
AHNAK2 AHNAK nucleoprotein 2 -0.0266182
TRIP12 thyroid hormone receptor interactor 12 -0.0265713
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0265667
COPB1 coatomer protein complex, subunit beta 1 -0.0265456
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0264926
MBTD1 mbt domain containing 1 -0.0261661
PTPRK protein tyrosine phosphatase, receptor type, K -0.0261042
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0260831
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0259126
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0257533
MYO10 myosin X -0.0257527
ACER3 alkaline ceramidase 3 -0.0255761
BIRC3 baculoviral IAP repeat containing 3 -0.0255617
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0255313
FAM114A1 family with sequence similarity 114, member A1 -0.0253867
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.0252724
ABR active BCR-related -0.0252353
RAB1A RAB1A, member RAS oncogene family -0.0252001
USP15 ubiquitin specific peptidase 15 -0.0249815
COG6 component of oligomeric golgi complex 6 -0.0246707
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0245815
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0244059
PRH1 proline-rich protein HaeIII subfamily 1 -0.0243851
PATJ PATJ crumbs cell polarity complex component -0.0241402
PDIA4 protein disulfide isomerase family A, member 4 -0.0233006
FAM177A1 family with sequence similarity 177, member A1 -0.0231671
PCNP PEST proteolytic signal containing nuclear protein -0.0231313
ARHGAP32 Rho GTPase activating protein 32 -0.0231263