Pentamidine (isethionate)_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pentamidine (isethionate) perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pentamidine (isethionate)_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin 0.0759003
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0630492
GOLGA4 golgin A4 0.0338527
GPC5 glypican 5 0.0324361
TPM3 tropomyosin 3 0.0323515
KTN1 kinectin 1 (kinesin receptor) 0.0322872
AKAP9 A kinase (PRKA) anchor protein 9 0.031037
CCL2 chemokine (C-C motif) ligand 2 0.0286529
DDIT4 DNA-damage-inducible transcript 4 0.0266629
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0265813
RPS6 ribosomal protein S6 0.0255784
IRS2 insulin receptor substrate 2 0.0255366
ARRDC3 arrestin domain containing 3 0.0253494
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.0250695
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0249615
AVL9 AVL9 homolog (S. cerevisiase) 0.0242343
SET SET nuclear proto-oncogene 0.0238316
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0237766
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0216965
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0216836
GIGYF2 GRB10 interacting GYF protein 2 0.0214507
BIRC6 baculoviral IAP repeat containing 6 0.0212121
TNRC6A trinucleotide repeat containing 6A 0.0208973
XPO1 exportin 1 0.0197107
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0191789
HDGF hepatoma-derived growth factor 0.0191447
SKAP2 src kinase associated phosphoprotein 2 0.019099
RPS2 ribosomal protein S2 0.0188684
PLK2 polo-like kinase 2 0.0188246
CDK19 cyclin-dependent kinase 19 0.0185205
RPL3 ribosomal protein L3 0.0183729
MPZL1 myelin protein zero-like 1 0.018362
SP3 Sp3 transcription factor 0.018265
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.018029
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0179487
G0S2 G0/G1 switch 2 0.0179091
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0177536
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0176687
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0175934
TPR translocated promoter region, nuclear basket protein 0.0174726
RPL14 ribosomal protein L14 0.0172129
ZNF148 zinc finger protein 148 0.0171162
CD46 CD46 molecule, complement regulatory protein 0.0170839
WASL Wiskott-Aldrich syndrome-like 0.0166361
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0165531
SLC35F3 solute carrier family 35, member F3 0.0164487
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0164214
METTL15 methyltransferase like 15 0.0163346
KLHDC10 kelch domain containing 10 0.0162372
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0161382
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0160384
RPS27 ribosomal protein S27 0.0157946
TTC3 tetratricopeptide repeat domain 3 0.0157095
MKRN1 makorin ring finger protein 1 0.015466
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0151652
NFE2L1 nuclear factor, erythroid 2-like 1 0.0150971
TMEM87B transmembrane protein 87B 0.0149346
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0148327
FAM13A family with sequence similarity 13, member A 0.0147725
PLEC plectin 0.0147469
CHD1 chromodomain helicase DNA binding protein 1 0.0146572
AP1AR adaptor-related protein complex 1 associated regulatory protein 0.0145488
RNF145 ring finger protein 145 0.0144594
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0144486
ZCCHC7 zinc finger, CCHC domain containing 7 0.0144324
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0143154
UGCG UDP-glucose ceramide glucosyltransferase 0.0140949
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0140777
RIPK2 receptor-interacting serine-threonine kinase 2 0.013996
RPL36 ribosomal protein L36 0.0139312
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0139054
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0138756
KMT2C lysine (K)-specific methyltransferase 2C 0.0138286
HPS3 Hermansky-Pudlak syndrome 3 0.0137371
USP3 ubiquitin specific peptidase 3 0.0136856
NRP2 neuropilin 2 0.0136078
USP33 ubiquitin specific peptidase 33 0.0135628
VIRMA vir like m6A methyltransferase associated 0.0134891
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0134372
CKAP5 cytoskeleton associated protein 5 0.0133549
DNM2 dynamin 2 0.0133104
CDK13 cyclin-dependent kinase 13 0.0132961
TMEM41B transmembrane protein 41B 0.0132309
ATXN2 ataxin 2 0.0132009
TOP2B topoisomerase (DNA) II beta 180kDa 0.0131831
SRRM1 serine/arginine repetitive matrix 1 0.0131564
GGNBP2 gametogenetin binding protein 2 0.0131131
GPR107 G protein-coupled receptor 107 0.0129761
SUCO SUN domain containing ossification factor 0.0129382
GAD1 glutamate decarboxylase 1 (brain, 67kDa) 0.0129163
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.0128787
PTMA prothymosin, alpha 0.0128264
RPS8 ribosomal protein S8 0.0128049
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0126803
SRSF11 serine/arginine-rich splicing factor 11 0.0126722
ANAPC5 anaphase promoting complex subunit 5 0.0126656
CCNY cyclin Y 0.0125643
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial 0.0125608
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0124738
CBX3 chromobox homolog 3 0.0124474

decreased expression

Symbol Name Standardized Value
FRMD4A FERM domain containing 4A -0.151234
GPC6 glypican 6 -0.145286
ASPH aspartate beta-hydroxylase -0.13206
EXT1 exostosin glycosyltransferase 1 -0.120863
CD44 CD44 molecule (Indian blood group) -0.108781
FNDC3B fibronectin type III domain containing 3B -0.103523
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0890611
TRIO trio Rho guanine nucleotide exchange factor -0.086612
IGFBP3 insulin-like growth factor binding protein 3 -0.0831219
VCL vinculin -0.0728592
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0710799
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0681731
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0667656
GLIS3 GLIS family zinc finger 3 -0.066277
TMSB10 thymosin beta 10 -0.0656988
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0642895
MAP1B microtubule-associated protein 1B -0.0638409
RAI14 retinoic acid induced 14 -0.0625661
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0608741
NAMPT nicotinamide phosphoribosyltransferase -0.0569951
INTS6 integrator complex subunit 6 -0.0536661
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0535808
RIGI RNA sensor RIG-I -0.05305
TSHZ2 teashirt zinc finger homeobox 2 -0.0523648
KYNU kynureninase -0.0520231
PDLIM5 PDZ and LIM domain 5 -0.0506529
RNF213 ring finger protein 213 -0.048963
PALLD palladin, cytoskeletal associated protein -0.0479632
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0458296
FAM107B family with sequence similarity 107, member B -0.0452214
CUX1 cut-like homeobox 1 -0.0445666
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0444824
DGKI diacylglycerol kinase, iota -0.0441218
CREB5 cAMP responsive element binding protein 5 -0.0436397
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0431889
EPAS1 endothelial PAS domain protein 1 -0.0428029
RND3 Rho family GTPase 3 -0.0418453
MYO1E myosin IE -0.0417968
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0412685
SMAD3 SMAD family member 3 -0.0403534
TPT1 tumor protein, translationally-controlled 1 -0.0392624
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0388683
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0384329
ALCAM activated leukocyte cell adhesion molecule -0.0377001
POTEF POTE ankyrin domain family, member F -0.0371951
FMNL2 formin-like 2 -0.0362093
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0360843
ACTG1 actin gamma 1 -0.0359853
IARS1 isoleucyl-tRNA synthetase 1 -0.0353192
NUP98 nucleoporin 98kDa -0.0346449
CP ceruloplasmin (ferroxidase) -0.0336064
SDCBP syndecan binding protein (syntenin) -0.0332072
NABP1 nucleic acid binding protein 1 -0.033016
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0327622
HLA-B major histocompatibility complex, class I, B -0.0326908
COTL1 coactosin-like F-actin binding protein 1 -0.0325879
NDRG1 N-myc downstream regulated 1 -0.0324088
SP100 SP100 nuclear antigen -0.0323261
VCAM1 vascular cell adhesion molecule 1 -0.032272
RUNX1 runt-related transcription factor 1 -0.0322023
RAB7A RAB7A, member RAS oncogene family -0.0318969
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.031827
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0317186
JAK1 Janus kinase 1 -0.0315276
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0315038
TPM1 tropomyosin 1 (alpha) -0.0312892
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0311087
CALU calumenin -0.031004
TPM4 tropomyosin 4 -0.0304776
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0304701
UBAP2 ubiquitin associated protein 2 -0.0302235
OSMR oncostatin M receptor -0.0297579
RAB2A RAB2A, member RAS oncogene family -0.0295764
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0294788
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0294012
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.029345
PTPRD protein tyrosine phosphatase, receptor type, D -0.0291375
ARL4C ADP-ribosylation factor-like 4C -0.028744
GLIPR1 GLI pathogenesis-related 1 -0.0284995
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0283972
SHB Src homology 2 domain containing adaptor protein B -0.0278087
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.027795
SAMD4A sterile alpha motif domain containing 4A -0.0277848
UBC ubiquitin C -0.0276951
SEC31A SEC31 homolog A (S. cerevisiae) -0.0276335
CD82 CD82 molecule -0.0275974
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0273995
CTSD cathepsin D -0.0273891
SPAG9 sperm associated antigen 9 -0.0270607
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0270552
KIRREL3 kin of IRRE like 3 (Drosophila) -0.0269295
LHFPL2 lipoma HMGIC fusion partner-like 2 -0.026921
HSPB1 heat shock 27kDa protein 1 -0.0269169
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0268876
ARF1 ADP-ribosylation factor 1 -0.0268086
RRM2 ribonucleotide reductase M2 -0.0267999
TMEM263 transmembrane protein 263 -0.0267418
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0266106
FSTL1 follistatin-like 1 -0.0265539
HLA-C major histocompatibility complex, class I, C -0.0264291